RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 LMBR1LQ6UX01 489 aa11.48□□□□□ -0.57
CMC1-209ENST00000477739 AOPEPQ8N6M6 819 aa11.48□□□□□ -0.57
CMC1-209ENST00000477739 ZNF496Q96IT1 587 aaPredicted RBP11.48□□□□□ -0.57
CMC1-209ENST00000477739 CEMIPQ8WUJ3 1361 aa11.48□□□□□ -0.57
CMC1-209ENST00000477739 AOX1Q06278 1338 aa11.48□□□□□ -0.57
CMC1-209ENST00000477739 SALL3Q9BXA9 1300 aa11.48□□□□□ -0.57
CMC1-209ENST00000477739 ANKRD13DQ6ZTN6 518 aa11.48□□□□□ -0.57
CMC1-209ENST00000477739 INTS4Q96HW7 963 aaKnown RBP11.48□□□□□ -0.57
CMC1-209ENST00000477739 PDLIM2Q96JY6 352 aa11.48□□□□□ -0.57
CMC1-209ENST00000477739 ADCY9O60503 1353 aa11.47□□□□□ -0.57
CMC1-209ENST00000477739 PES1O00541 588 aaKnown RBP11.47□□□□□ -0.57
CMC1-209ENST00000477739 EVI5LQ96CN4 794 aa11.47□□□□□ -0.57
CMC1-209ENST00000477739 NEK1Q96PY6 1258 aa11.47□□□□□ -0.57
CMC1-209ENST00000477739 TTC41PQ6P2S7 1318 aa11.47□□□□□ -0.57
CMC1-209ENST00000477739 LMOD1P29536 600 aaPredicted RBP11.47□□□□□ -0.57
CMC1-209ENST00000477739 TOM1L2Q6ZVM7 507 aa11.47□□□□□ -0.57
CMC1-209ENST00000477739 ADGRL3Q9HAR2 1447 aa11.47□□□□□ -0.57
CMC1-209ENST00000477739 PIK3C2AO00443 1686 aa11.47□□□□□ -0.57
CMC1-209ENST00000477739 NFXL1Q6ZNB6 911 aa11.46□□□□□ -0.57
CMC1-209ENST00000477739 FAM200AQ8TCP9 573 aa11.46□□□□□ -0.57
CMC1-209ENST00000477739 PRDM11Q9NQV5 511 aa11.46□□□□□ -0.57
CMC1-209ENST00000477739 IQSEC3Q9UPP2 1182 aaPredicted RBP11.46□□□□□ -0.57
CMC1-209ENST00000477739 ERBB3P21860 1342 aa11.46□□□□□ -0.57
CMC1-209ENST00000477739 SLC52A2Q9HAB3 445 aa11.46□□□□□ -0.57
CMC1-209ENST00000477739 RPAP1Q9BWH6 1393 aaPredicted RBP11.46□□□□□ -0.58
CMC1-209ENST00000477739 NPHP4O75161 1426 aaPredicted RBP11.46□□□□□ -0.58
CMC1-209ENST00000477739 POLR3GO15318 223 aaPredicted RBP11.46□□□□□ -0.58
CMC1-209ENST00000477739 SASH1O94885 1247 aa11.46□□□□□ -0.58
CMC1-209ENST00000477739 SNRPA1P09661 255 aaKnown RBP11.46□□□□□ -0.58
CMC1-209ENST00000477739 HMGN5P82970 282 aaKnown RBP11.46□□□□□ -0.58
CMC1-209ENST00000477739 PI16Q6UXB8 463 aa11.46□□□□□ -0.58
CMC1-209ENST00000477739 LEO1Q8WVC0 666 aaPredicted RBP11.46□□□□□ -0.58
CMC1-209ENST00000477739 MYL10Q9BUA6 226 aa11.46□□□□□ -0.58
CMC1-209ENST00000477739 KCNF1Q9H3M0 494 aa11.46□□□□□ -0.58
CMC1-209ENST00000477739 PDCP20941 246 aa11.45□□□□□ -0.58
CMC1-209ENST00000477739 NPHP3Q7Z494 1330 aa11.45□□□□□ -0.58
CMC1-209ENST00000477739 IDH1O75874 414 aaKnown RBP11.45□□□□□ -0.58
CMC1-209ENST00000477739 SKILP12757 684 aa11.45□□□□□ -0.58
CMC1-209ENST00000477739 TMC6Q7Z403 805 aa11.45□□□□□ -0.58
CMC1-209ENST00000477739 GPIHBP1Q8IV16 184 aa11.45□□□□□ -0.58
CMC1-209ENST00000477739 HELBQ8NG08 1087 aaPredicted RBP11.45□□□□□ -0.58
CMC1-209ENST00000477739 FER1L4A9Z1Z3 1794 aa11.45□□□□□ -0.58
CMC1-209ENST00000477739 USP27XA6NNY8 438 aa11.45□□□□□ -0.58
CMC1-209ENST00000477739 HIP1O00291 1037 aa11.45□□□□□ -0.58
CMC1-209ENST00000477739 C11orf57Q6ZUT1 292 aaPredicted RBP11.45□□□□□ -0.58
CMC1-209ENST00000477739 MYRIPQ8NFW9 859 aa11.45□□□□□ -0.58
CMC1-209ENST00000477739 TOPAZ1Q8N9V7 1692 aa11.45□□□□□ -0.58
CMC1-209ENST00000477739 MRVI1Q9Y6F6 885 aa11.44□□□□□ -0.58
CMC1-209ENST00000477739 PHKG2P15735 406 aa11.44□□□□□ -0.58
CMC1-209ENST00000477739 EVA1CP58658 441 aa11.44□□□□□ -0.58
CMC1-209ENST00000477739 SYNE3Q6ZMZ3 975 aa11.44□□□□□ -0.58
CMC1-209ENST00000477739 MICU3Q86XE3 530 aa11.44□□□□□ -0.58
CMC1-209ENST00000477739 CPLX3Q8WVH0 158 aa11.44□□□□□ -0.58
CMC1-209ENST00000477739 GCKRQ14397 625 aa11.44□□□□□ -0.58
CMC1-209ENST00000477739 CLEC17AQ6ZS10 378 aa11.44□□□□□ -0.58
CMC1-209ENST00000477739 RALYLQ86SE5 291 aaKnown RBP11.44□□□□□ -0.58
CMC1-209ENST00000477739 CACTINQ8WUQ7 758 aaKnown RBP11.44□□□□□ -0.58
CMC1-209ENST00000477739 PTPDC1A2A3K4 754 aa11.43□□□□□ -0.58
CMC1-209ENST00000477739 NEURL1BA8MQ27 555 aa11.43□□□□□ -0.58
CMC1-209ENST00000477739 KLHL10Q6JEL2 608 aa11.43□□□□□ -0.58
CMC1-209ENST00000477739 CMTR1Q8N1G2 835 aaKnown RBP11.43□□□□□ -0.58
CMC1-209ENST00000477739 ZSCAN31Q96LW9 406 aaPredicted RBP11.43□□□□□ -0.58
CMC1-209ENST00000477739 COBLO75128 1261 aa11.43□□□□□ -0.58
CMC1-209ENST00000477739 LETM1O95202 739 aaPredicted RBP11.43□□□□□ -0.58
CMC1-209ENST00000477739 CCDC144BQ3MJ40 725 aa11.43□□□□□ -0.58
CMC1-209ENST00000477739 GTF3C6Q969F1 213 aa11.43□□□□□ -0.58
CMC1-209ENST00000477739 SH2B1Q9NRF2 756 aaPredicted RBP11.43□□□□□ -0.58
CMC1-209ENST00000477739 TCHHQ07283 1943 aa11.43□□□□□ -0.58
CMC1-209ENST00000477739 IGKV5-2P06315 115 aa11.43□□□□□ -0.58
CMC1-209ENST00000477739 PTPN14Q15678 1187 aa11.43□□□□□ -0.58
CMC1-209ENST00000477739 USP28Q96RU2 1077 aa11.43□□□□□ -0.58
CMC1-209ENST00000477739 MAP7D2Q96T17 732 aa11.43□□□□□ -0.58
CMC1-209ENST00000477739 RNF216Q9NWF9 866 aaPredicted RBP11.43□□□□□ -0.58
CMC1-209ENST00000477739 GOLGA8BA8MQT2 603 aa11.42□□□□□ -0.58
CMC1-209ENST00000477739 SERPINC1P01008 464 aa11.42□□□□□ -0.58
CMC1-209ENST00000477739 A1BGP04217 495 aa11.42□□□□□ -0.58
CMC1-209ENST00000477739 IFIT1P09914 478 aaKnown RBP11.42□□□□□ -0.58
CMC1-209ENST00000477739 CDK11BP21127 795 aaKnown RBP11.42□□□□□ -0.58
CMC1-209ENST00000477739 ZNF710Q8N1W2 664 aa11.42□□□□□ -0.58
CMC1-209ENST00000477739 AIFM3Q96NN9 605 aa11.42□□□□□ -0.58
CMC1-209ENST00000477739 METTL22Q9BUU2 404 aaPredicted RBP11.42□□□□□ -0.58
CMC1-209ENST00000477739 SCAND2PQ9GZW5 306 aaPredicted RBP11.42□□□□□ -0.58
CMC1-209ENST00000477739 DBNLQ9UJU6 430 aaKnown RBP11.42□□□□□ -0.58
CMC1-209ENST00000477739 PXDNQ92626 1479 aa11.42□□□□□ -0.58
CMC1-209ENST00000477739 GOLGB1Q14789 3259 aaKnown RBP11.42□□□□□ -0.58
CMC1-209ENST00000477739 RPS6KB1P23443 525 aa11.42□□□□□ -0.58
CMC1-209ENST00000477739 DCAF5Q96JK2 942 aa11.42□□□□□ -0.58
CMC1-209ENST00000477739 TTC14Q96N46 770 aa11.42□□□□□ -0.58
CMC1-209ENST00000477739 ZKSCAN3Q9BRR0 538 aa11.42□□□□□ -0.58
CMC1-209ENST00000477739 CCDC94Q9BW85 323 aaPredicted RBP11.42□□□□□ -0.58
CMC1-209ENST00000477739 ST7Q9NRC1 585 aa11.42□□□□□ -0.58
CMC1-209ENST00000477739 hCG_1642624A0A1W2PR95 340 aa11.42□□□□□ -0.58
CMC1-209ENST00000477739 CCDC69A6NI79 296 aa11.42□□□□□ -0.58
CMC1-209ENST00000477739 SNAP23O00161 211 aa11.42□□□□□ -0.58
CMC1-209ENST00000477739 ZBTB22O15209 634 aa11.42□□□□□ -0.58
CMC1-209ENST00000477739 ST3GAL1Q11201 340 aa11.42□□□□□ -0.58
CMC1-209ENST00000477739 ELF2Q15723 593 aa11.42□□□□□ -0.58
CMC1-209ENST00000477739 HS1BP3Q53T59 392 aa11.42□□□□□ -0.58
CMC1-209ENST00000477739 CEP135Q66GS9 1140 aa11.42□□□□□ -0.58
CMC1-209ENST00000477739 CADPS2Q86UW7 1296 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms