RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 TRAPPC3LQ5T215 181 aa8.7□□□□□ -1.02
LINC00173-202ENST00000477702 MON2Q7Z3U7 1717 aa8.7□□□□□ -1.02
LINC00173-202ENST00000477702 ARFGEF1Q9Y6D6 1849 aa8.7□□□□□ -1.02
LINC00173-202ENST00000477702 PDE4DIPQ5VU43 2346 aa8.7□□□□□ -1.02
LINC00173-202ENST00000477702 TNRC18O15417 2968 aaPredicted RBP8.69□□□□□ -1.02
LINC00173-202ENST00000477702 POTECB2RU33 542 aa8.69□□□□□ -1.02
LINC00173-202ENST00000477702 ABL2P42684 1182 aa8.69□□□□□ -1.02
LINC00173-202ENST00000477702 VEGFBP49765 207 aa8.69□□□□□ -1.02
LINC00173-202ENST00000477702 ASAP1Q9ULH1 1129 aa8.69□□□□□ -1.02
LINC00173-202ENST00000477702 PCDH11XQ9BZA7 1347 aa8.69□□□□□ -1.02
LINC00173-202ENST00000477702 PCDH11YQ9BZA8 1340 aa8.69□□□□□ -1.02
LINC00173-202ENST00000477702 CNTNAP1P78357 1384 aa8.69□□□□□ -1.02
LINC00173-202ENST00000477702 C4AP0C0L4 1744 aa8.68□□□□□ -1.02
LINC00173-202ENST00000477702 SBF1O95248 1867 aa8.68□□□□□ -1.02
LINC00173-202ENST00000477702 HSPA8P11142 646 aaKnown RBP8.68□□□□□ -1.02
LINC00173-202ENST00000477702 GYS1P13807 737 aa8.68□□□□□ -1.02
LINC00173-202ENST00000477702 LMNB1P20700 586 aa8.68□□□□□ -1.02
LINC00173-202ENST00000477702 HDGFL2Q7Z4V5 671 aaPredicted RBP8.68□□□□□ -1.02
LINC00173-202ENST00000477702 SLC12A5Q9H2X9 1139 aa8.68□□□□□ -1.02
LINC00173-202ENST00000477702 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.68□□□□□ -1.02
LINC00173-202ENST00000477702 RTCBQ9Y3I0 505 aaKnown RBP8.68□□□□□ -1.02
LINC00173-202ENST00000477702 NDUFB9Q9Y6M9 179 aa8.68□□□□□ -1.02
LINC00173-202ENST00000477702 CGNL1Q0VF96 1302 aa8.68□□□□□ -1.02
LINC00173-202ENST00000477702 CD163L1Q9NR16 1453 aa8.68□□□□□ -1.02
LINC00173-202ENST00000477702 MAP2P11137 1827 aaKnown RBP8.67□□□□□ -1.02
LINC00173-202ENST00000477702 ITGB4P16144 1822 aa8.67□□□□□ -1.02
LINC00173-202ENST00000477702 RFC4P35249 363 aa8.67□□□□□ -1.02
LINC00173-202ENST00000477702 RGS19P49795 217 aa8.67□□□□□ -1.02
LINC00173-202ENST00000477702 IRF5Q13568 498 aa8.67□□□□□ -1.02
LINC00173-202ENST00000477702 UNC93B1Q9H1C4 597 aa8.67□□□□□ -1.02
LINC00173-202ENST00000477702 EDC4Q6P2E9 1401 aaKnown RBP8.66□□□□□ -1.02
LINC00173-202ENST00000477702 ZC3H4Q9UPT8 1303 aaKnown RBP8.66□□□□□ -1.02
LINC00173-202ENST00000477702 RAD21O60216 631 aa8.66□□□□□ -1.02
LINC00173-202ENST00000477702 DDR1Q08345 913 aa8.66□□□□□ -1.02
LINC00173-202ENST00000477702 RRS1Q15050 365 aaKnown RBP8.66□□□□□ -1.02
LINC00173-202ENST00000477702 EMID1Q96A84 441 aaPredicted RBP8.66□□□□□ -1.02
LINC00173-202ENST00000477702 TMOD3Q9NYL9 352 aa8.66□□□□□ -1.02
LINC00173-202ENST00000477702 SRP68Q9UHB9 627 aaKnown RBP8.66□□□□□ -1.02
LINC00173-202ENST00000477702 KDM6AO15550 1401 aaPredicted RBP8.65□□□□□ -1.02
LINC00173-202ENST00000477702 A6NJR5 290 aa8.65□□□□□ -1.02
LINC00173-202ENST00000477702 COG3Q96JB2 828 aa8.65□□□□□ -1.02
LINC00173-202ENST00000477702 FKBPLQ9UIM3 349 aa8.65□□□□□ -1.02
LINC00173-202ENST00000477702 A0A1W2PP64 1363 aa8.64□□□□□ -1.03
LINC00173-202ENST00000477702 GGCXP38435 758 aa8.64□□□□□ -1.03
LINC00173-202ENST00000477702 LINC01559Q495D7 138 aa8.64□□□□□ -1.03
LINC00173-202ENST00000477702 ANKLE1Q8NAG6 615 aa8.64□□□□□ -1.03
LINC00173-202ENST00000477702 SLC4A9Q96Q91 983 aa8.64□□□□□ -1.03
LINC00173-202ENST00000477702 ATG3Q9NT62 314 aa8.64□□□□□ -1.03
LINC00173-202ENST00000477702 APBB1O00213 710 aa8.63□□□□□ -1.03
LINC00173-202ENST00000477702 NFKBIEO00221 500 aa8.63□□□□□ -1.03
LINC00173-202ENST00000477702 LIAT1Q6ZQX7 453 aa8.63□□□□□ -1.03
LINC00173-202ENST00000477702 BAP1Q92560 729 aa8.63□□□□□ -1.03
LINC00173-202ENST00000477702 TERF2IPQ9NYB0 399 aa8.63□□□□□ -1.03
LINC00173-202ENST00000477702 TIAM2Q8IVF5 1701 aa8.63□□□□□ -1.03
LINC00173-202ENST00000477702 PASKQ96RG2 1323 aa8.62□□□□□ -1.03
LINC00173-202ENST00000477702 TMEM88BA6NKF7 163 aa8.62□□□□□ -1.03
LINC00173-202ENST00000477702 POM121CA8CG34 1229 aa8.62□□□□□ -1.03
LINC00173-202ENST00000477702 TRAK2O60296 914 aa8.62□□□□□ -1.03
LINC00173-202ENST00000477702 RPS6KA4O75676 772 aa8.62□□□□□ -1.03
LINC00173-202ENST00000477702 HSP90AB2PQ58FF8 381 aa8.62□□□□□ -1.03
LINC00173-202ENST00000477702 ERICH6Q7L0X2 663 aa8.62□□□□□ -1.03
LINC00173-202ENST00000477702 SMG6Q86US8 1419 aaKnown RBP8.62□□□□□ -1.03
LINC00173-202ENST00000477702 DDNO94850 711 aaPredicted RBP8.61□□□□□ -1.03
LINC00173-202ENST00000477702 VAC14Q08AM6 782 aa8.61□□□□□ -1.03
LINC00173-202ENST00000477702 ERFEQ4G0M1 354 aa8.61□□□□□ -1.03
LINC00173-202ENST00000477702 RC3H1Q5TC82 1133 aaKnown RBP8.61□□□□□ -1.03
LINC00173-202ENST00000477702 OCSTAMPQ9BR26 566 aa8.61□□□□□ -1.03
LINC00173-202ENST00000477702 PRM3Q9NNZ6 103 aa8.61□□□□□ -1.03
LINC00173-202ENST00000477702 RTL1A6NKG5 1358 aa8.61□□□□□ -1.03
LINC00173-202ENST00000477702 ROCK2O75116 1388 aaKnown RBP8.61□□□□□ -1.03
LINC00173-202ENST00000477702 KDRP35968 1356 aa8.61□□□□□ -1.03
LINC00173-202ENST00000477702 CNTNAP4Q9C0A0 1308 aa8.6□□□□□ -1.03
LINC00173-202ENST00000477702 CCDC88AQ3V6T2 1871 aa8.6□□□□□ -1.03
LINC00173-202ENST00000477702 POLRMTO00411 1230 aaKnown RBP8.6□□□□□ -1.03
LINC00173-202ENST00000477702 MAP2K1Q02750 393 aaPredicted RBP8.6□□□□□ -1.03
LINC00173-202ENST00000477702 DEFB115Q30KQ5 88 aa8.6□□□□□ -1.03
LINC00173-202ENST00000477702 TTLL6Q8N841 843 aa8.6□□□□□ -1.03
LINC00173-202ENST00000477702 FOXJ1Q92949 421 aa8.6□□□□□ -1.03
LINC00173-202ENST00000477702 SPG7Q9UQ90 795 aa8.6□□□□□ -1.03
LINC00173-202ENST00000477702 VIRMAQ69YN4 1812 aaKnown RBP8.59□□□□□ -1.03
LINC00173-202ENST00000477702 WDR33Q9C0J8 1336 aaKnown RBP8.59□□□□□ -1.03
LINC00173-202ENST00000477702 FBXO45P0C2W1 286 aa8.59□□□□□ -1.03
LINC00173-202ENST00000477702 TRIM32Q13049 653 aa8.59□□□□□ -1.03
LINC00173-202ENST00000477702 GRM1Q13255 1194 aa8.59□□□□□ -1.03
LINC00173-202ENST00000477702 EAPPQ56P03 285 aaPredicted RBP8.59□□□□□ -1.03
LINC00173-202ENST00000477702 LDHDQ86WU2 507 aa8.59□□□□□ -1.03
LINC00173-202ENST00000477702 C2CD5Q86YS7 1000 aa8.59□□□□□ -1.03
LINC00173-202ENST00000477702 L3MBTL2Q969R5 705 aa8.59□□□□□ -1.03
LINC00173-202ENST00000477702 MCOLN1Q9GZU1 580 aa8.59□□□□□ -1.03
LINC00173-202ENST00000477702 ABT1Q9ULW3 272 aaKnown RBP8.59□□□□□ -1.03
LINC00173-202ENST00000477702 ZNF330Q9Y3S2 320 aaPredicted RBP8.59□□□□□ -1.03
LINC00173-202ENST00000477702 USP42Q9H9J4 1324 aaKnown RBP8.58□□□□□ -1.04
LINC00173-202ENST00000477702 RASSF10A6NK89 507 aa8.58□□□□□ -1.04
LINC00173-202ENST00000477702 TM4SF1P30408 202 aa8.58□□□□□ -1.04
LINC00173-202ENST00000477702 CRKLP46109 303 aaKnown RBP8.58□□□□□ -1.04
LINC00173-202ENST00000477702 SH3BP2P78314 561 aa8.58□□□□□ -1.04
LINC00173-202ENST00000477702 SKOR1P84550 965 aa8.58□□□□□ -1.04
LINC00173-202ENST00000477702 C4orf48Q5BLP8 95 aa8.58□□□□□ -1.04
LINC00173-202ENST00000477702 GGNBP2Q9H3C7 697 aa8.58□□□□□ -1.04
LINC00173-202ENST00000477702 C1orf115Q9H7X2 142 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms