RNA–Protein interactions for RNA: ENST00000477392.1

LINC00996-201, long intergenic non-protein coding RNA 996, humanhuman

TSL 1 (best) BASIC

Gene LINC00996, Length 2,043 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00996-201ENST00000477392 CCDC85AQ96PX6 553 aaPredicted RBP18.74■□□□□ 0.59
LINC00996-201ENST00000477392 TMEM63CQ9P1W3 806 aa18.74■□□□□ 0.59
LINC00996-201ENST00000477392 U3KPZ7 1027 aaPredicted RBP18.74■□□□□ 0.59
LINC00996-201ENST00000477392 MBD3O95983 291 aa18.73■□□□□ 0.59
LINC00996-201ENST00000477392 IFIT1P09914 478 aaKnown RBP18.73■□□□□ 0.59
LINC00996-201ENST00000477392 PRIM1P49642 420 aaKnown RBP18.73■□□□□ 0.59
LINC00996-201ENST00000477392 TICAM2Q86XR7 235 aa18.73■□□□□ 0.59
LINC00996-201ENST00000477392 NECAB1Q8N987 351 aa18.73■□□□□ 0.59
LINC00996-201ENST00000477392 SPATA31A1Q5TZJ5 1347 aa18.73■□□□□ 0.59
LINC00996-201ENST00000477392 DTNBO60941 627 aa18.73■□□□□ 0.59
LINC00996-201ENST00000477392 FOXD4L6Q3SYB3 417 aaPredicted RBP18.73■□□□□ 0.59
LINC00996-201ENST00000477392 HSP90AB3PQ58FF7 597 aa18.73■□□□□ 0.59
LINC00996-201ENST00000477392 ZMYM1Q5SVZ6 1142 aa18.73■□□□□ 0.59
LINC00996-201ENST00000477392 FOXD4L3Q6VB84 417 aaPredicted RBP18.73■□□□□ 0.59
LINC00996-201ENST00000477392 HELLSQ9NRZ9 838 aa18.73■□□□□ 0.59
LINC00996-201ENST00000477392 RREB1Q92766 1687 aa18.73■□□□□ 0.59
LINC00996-201ENST00000477392 SLIT2O94813 1529 aa18.72■□□□□ 0.59
LINC00996-201ENST00000477392 F13A1P00488 732 aa18.72■□□□□ 0.59
LINC00996-201ENST00000477392 ADORA1P30542 326 aa18.72■□□□□ 0.59
LINC00996-201ENST00000477392 KRT32Q14532 448 aa18.72■□□□□ 0.59
LINC00996-201ENST00000477392 MYH7P12883 1935 aa18.72■□□□□ 0.59
LINC00996-201ENST00000477392 LRP5O75197 1615 aa18.71■□□□□ 0.59
LINC00996-201ENST00000477392 CICQ96RK0 1608 aaPredicted RBP18.71■□□□□ 0.59
LINC00996-201ENST00000477392 CYP21A2P08686 494 aa18.71■□□□□ 0.59
LINC00996-201ENST00000477392 IFIT5Q13325 482 aaKnown RBP18.71■□□□□ 0.59
LINC00996-201ENST00000477392 ANKRD1Q15327 319 aa18.71■□□□□ 0.59
LINC00996-201ENST00000477392 TMEM87AQ8NBN3 555 aa18.71■□□□□ 0.59
LINC00996-201ENST00000477392 GDPD2Q9HCC8 539 aa18.71■□□□□ 0.59
LINC00996-201ENST00000477392 XAGE2Q96GT9 111 aa18.71■□□□□ 0.59
LINC00996-201ENST00000477392 CDCA7Q9BWT1 371 aaPredicted RBP18.71■□□□□ 0.59
LINC00996-201ENST00000477392 MTMR6Q9Y217 621 aa18.71■□□□□ 0.59
LINC00996-201ENST00000477392 ADAMTS2O95450 1211 aa18.7■□□□□ 0.58
LINC00996-201ENST00000477392 IL6STP40189 918 aaPredicted RBP18.7■□□□□ 0.58
LINC00996-201ENST00000477392 CTSWP56202 376 aa18.7■□□□□ 0.58
LINC00996-201ENST00000477392 USP48Q86UV5 1035 aa18.7■□□□□ 0.58
LINC00996-201ENST00000477392 FAM43AQ8N2R8 423 aa18.7■□□□□ 0.58
LINC00996-201ENST00000477392 TTLL11Q8NHH1 800 aa18.7■□□□□ 0.58
LINC00996-201ENST00000477392 AKAP2Q9Y2D5 859 aa18.7■□□□□ 0.58
LINC00996-201ENST00000477392 AKAP11Q9UKA4 1901 aa18.7■□□□□ 0.58
LINC00996-201ENST00000477392 NWD2Q9ULI1 1742 aa18.7■□□□□ 0.58
LINC00996-201ENST00000477392 MAST3O60307 1309 aa18.7■□□□□ 0.58
LINC00996-201ENST00000477392 ERVV-1B6SEH8 477 aa18.69■□□□□ 0.58
LINC00996-201ENST00000477392 GADD45BO75293 160 aaPredicted RBP18.69■□□□□ 0.58
LINC00996-201ENST00000477392 TAF7LQ5H9L4 462 aa18.69■□□□□ 0.58
LINC00996-201ENST00000477392 GREM2Q9H772 168 aa18.69■□□□□ 0.58
LINC00996-201ENST00000477392 UBN2Q6ZU65 1347 aa18.69■□□□□ 0.58
LINC00996-201ENST00000477392 RNF113AO15541 343 aaKnown RBP18.69■□□□□ 0.58
LINC00996-201ENST00000477392 STOX1Q6ZVD7 989 aa18.69■□□□□ 0.58
LINC00996-201ENST00000477392 DZIP3Q86Y13 1208 aaKnown RBP18.69■□□□□ 0.58
LINC00996-201ENST00000477392 NEK1Q96PY6 1258 aa18.69■□□□□ 0.58
LINC00996-201ENST00000477392 DSCC1Q9BVC3 393 aa18.69■□□□□ 0.58
LINC00996-201ENST00000477392 CNPY2Q9Y2B0 182 aa18.69■□□□□ 0.58
LINC00996-201ENST00000477392 THRAP3Q9Y2W1 955 aaKnown RBP18.69■□□□□ 0.58
LINC00996-201ENST00000477392 RIPOR2Q9Y4F9 1068 aa18.69■□□□□ 0.58
LINC00996-201ENST00000477392 ITGA6P23229 1130 aa18.68■□□□□ 0.58
LINC00996-201ENST00000477392 IRS4O14654 1257 aaPredicted RBP18.67■□□□□ 0.58
LINC00996-201ENST00000477392 TTC39AQ5SRH9 613 aa18.67■□□□□ 0.58
LINC00996-201ENST00000477392 TBC1D2BQ9UPU7 963 aa18.67■□□□□ 0.58
LINC00996-201ENST00000477392 MYH14Q7Z406 1995 aaKnown RBP18.67■□□□□ 0.58
LINC00996-201ENST00000477392 M0R2C6 588 aa18.67■□□□□ 0.58
LINC00996-201ENST00000477392 NASPP49321 788 aaPredicted RBP18.67■□□□□ 0.58
LINC00996-201ENST00000477392 SCARF1Q14162 830 aa18.67■□□□□ 0.58
LINC00996-201ENST00000477392 DDB1Q16531 1140 aa18.67■□□□□ 0.58
LINC00996-201ENST00000477392 CCDC158Q5M9N0 1113 aa18.67■□□□□ 0.58
LINC00996-201ENST00000477392 ZNF34Q8IZ26 560 aa18.67■□□□□ 0.58
LINC00996-201ENST00000477392 TRMT112Q9UI30 125 aaKnown RBP18.67■□□□□ 0.58
LINC00996-201ENST00000477392 ARAP2Q8WZ64 1704 aa18.67■□□□□ 0.58
LINC00996-201ENST00000477392 ABCC12Q96J65 1359 aa18.67■□□□□ 0.58
LINC00996-201ENST00000477392 MARCH10Q8NA82 808 aaPredicted RBP18.66■□□□□ 0.58
LINC00996-201ENST00000477392 SYCE3A1L190 88 aa18.66■□□□□ 0.58
LINC00996-201ENST00000477392 HSPD1P10809 573 aaKnown RBP18.66■□□□□ 0.58
LINC00996-201ENST00000477392 EIF5P55010 431 aaKnown RBP18.66■□□□□ 0.58
LINC00996-201ENST00000477392 ATP2B3Q16720 1220 aa18.66■□□□□ 0.58
LINC00996-201ENST00000477392 GORABQ5T7V8 394 aa18.66■□□□□ 0.58
LINC00996-201ENST00000477392 INTS5Q6P9B9 1019 aaKnown RBP18.66■□□□□ 0.58
LINC00996-201ENST00000477392 LRSAM1Q6UWE0 723 aa18.66■□□□□ 0.58
LINC00996-201ENST00000477392 VGLL2Q8N8G2 317 aa18.66■□□□□ 0.58
LINC00996-201ENST00000477392 SPATA31A5Q5VU36 1347 aa18.65■□□□□ 0.58
LINC00996-201ENST00000477392 SPATA31A7Q8IWB4 1347 aa18.65■□□□□ 0.58
LINC00996-201ENST00000477392 ANKRD18BA2A2Z9 1011 aa18.65■□□□□ 0.58
LINC00996-201ENST00000477392 FKBP4Q02790 459 aaKnown RBP eCLIP18.65■□□□□ 0.58
LINC00996-201ENST00000477392 METTL24Q5JXM2 366 aa18.65■□□□□ 0.58
LINC00996-201ENST00000477392 OSBP2Q969R2 916 aa18.65■□□□□ 0.58
LINC00996-201ENST00000477392 RBSNQ9H1K0 784 aa18.65■□□□□ 0.58
LINC00996-201ENST00000477392 DDX60Q8IY21 1712 aaKnown RBP18.65■□□□□ 0.58
LINC00996-201ENST00000477392 A0A0G2JLW4 131 aa18.64■□□□□ 0.58
LINC00996-201ENST00000477392 PDE8AO60658 829 aa18.64■□□□□ 0.58
LINC00996-201ENST00000477392 LDHAL6AQ6ZMR3 332 aa18.64■□□□□ 0.58
LINC00996-201ENST00000477392 Q6ZUG5 572 aa18.64■□□□□ 0.58
LINC00996-201ENST00000477392 ACSBG1Q96GR2 724 aa18.64■□□□□ 0.58
LINC00996-201ENST00000477392 ATP6V1DQ9Y5K8 247 aa18.64■□□□□ 0.58
LINC00996-201ENST00000477392 LAMB2P55268 1798 aa18.64■□□□□ 0.57
LINC00996-201ENST00000477392 MYO5AQ9Y4I1 1855 aaKnown RBP18.64■□□□□ 0.57
LINC00996-201ENST00000477392 VPS37CA5D8V6 355 aaPredicted RBP18.64■□□□□ 0.57
LINC00996-201ENST00000477392 ZAP70P43403 619 aa18.64■□□□□ 0.57
LINC00996-201ENST00000477392 GTF3C6Q969F1 213 aa18.64■□□□□ 0.57
LINC00996-201ENST00000477392 CCDC87Q9NVE4 849 aa18.64■□□□□ 0.57
LINC00996-201ENST00000477392 COL5A3P25940 1745 aaPredicted RBP18.63■□□□□ 0.57
LINC00996-201ENST00000477392 STK3Q13188 491 aa18.63■□□□□ 0.57
LINC00996-201ENST00000477392 PI16Q6UXB8 463 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms