RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 NOS1P29475 1434 aa21.2■□□□□ 0.98
VARS2-209ENST00000477288 SMARCC2Q8TAQ2 1214 aa21.2■□□□□ 0.98
VARS2-209ENST00000477288 IPO4Q8TEX9 1081 aaKnown RBP21.2■□□□□ 0.98
VARS2-209ENST00000477288 HSF2BPO75031 334 aa21.2■□□□□ 0.98
VARS2-209ENST00000477288 MXRA7P84157 204 aa21.2■□□□□ 0.98
VARS2-209ENST00000477288 C16orf71Q8IYS4 520 aaPredicted RBP21.2■□□□□ 0.98
VARS2-209ENST00000477288 BBXQ8WY36 941 aaPredicted RBP21.2■□□□□ 0.98
VARS2-209ENST00000477288 AKR1B10O60218 316 aa21.2■□□□□ 0.98
VARS2-209ENST00000477288 STAT6P42226 847 aa21.2■□□□□ 0.98
VARS2-209ENST00000477288 GNG11P61952 73 aa21.19■□□□□ 0.98
VARS2-209ENST00000477288 FBF1Q8TES7 1133 aa21.19■□□□□ 0.98
VARS2-209ENST00000477288 RBM27Q9P2N5 1060 aaKnown RBP21.19■□□□□ 0.98
VARS2-209ENST00000477288 MSH6P52701 1360 aa21.19■□□□□ 0.98
VARS2-209ENST00000477288 RMND1Q9NWS8 449 aa21.19■□□□□ 0.98
VARS2-209ENST00000477288 CHPF2Q9P2E5 772 aa21.19■□□□□ 0.98
VARS2-209ENST00000477288 IFI16Q16666 785 aaKnown RBP21.19■□□□□ 0.98
VARS2-209ENST00000477288 NAA16Q6N069 864 aaPredicted RBP21.19■□□□□ 0.98
VARS2-209ENST00000477288 TBC1D9Q6ZT07 1266 aa21.19■□□□□ 0.98
VARS2-209ENST00000477288 DPH6Q7L8W6 267 aa21.19■□□□□ 0.98
VARS2-209ENST00000477288 NIP7Q9Y221 180 aaKnown RBP eCLIP21.19■□□□□ 0.98
VARS2-209ENST00000477288 CCDC172P0C7W6 258 aa21.19■□□□□ 0.98
VARS2-209ENST00000477288 KRT13P13646 458 aa21.19■□□□□ 0.98
VARS2-209ENST00000477288 HSP90AA4PQ58FG1 418 aa21.19■□□□□ 0.98
VARS2-209ENST00000477288 MRVI1Q9Y6F6 885 aa21.19■□□□□ 0.98
VARS2-209ENST00000477288 ZBTB43O43298 467 aa21.18■□□□□ 0.98
VARS2-209ENST00000477288 CALM1P0DP23 149 aa21.18■□□□□ 0.98
VARS2-209ENST00000477288 CALM2P0DP24 149 aa21.18■□□□□ 0.98
VARS2-209ENST00000477288 CALM3P0DP25 149 aa21.18■□□□□ 0.98
VARS2-209ENST00000477288 ATP2B3Q16720 1220 aa21.18■□□□□ 0.98
VARS2-209ENST00000477288 ZNF804AQ7Z570 1209 aa21.18■□□□□ 0.98
VARS2-209ENST00000477288 RAB3IL1Q8TBN0 382 aa21.18■□□□□ 0.98
VARS2-209ENST00000477288 ESR2Q92731 530 aa21.18■□□□□ 0.98
VARS2-209ENST00000477288 CCDC155Q8N6L0 562 aa21.18■□□□□ 0.98
VARS2-209ENST00000477288 XAGE3Q8WTP9 111 aa21.18■□□□□ 0.98
VARS2-209ENST00000477288 SPATA24Q86W54 205 aa21.18■□□□□ 0.98
VARS2-209ENST00000477288 LRRC2Q9BYS8 371 aa21.18■□□□□ 0.98
VARS2-209ENST00000477288 IQCGQ9H095 443 aaKnown RBP21.18■□□□□ 0.98
VARS2-209ENST00000477288 USP37Q86T82 979 aa21.18■□□□□ 0.98
VARS2-209ENST00000477288 SREK1Q8WXA9 508 aaKnown RBP21.18■□□□□ 0.98
VARS2-209ENST00000477288 RTN1Q16799 776 aa21.17■□□□□ 0.98
VARS2-209ENST00000477288 BRF1Q92994 677 aa21.17■□□□□ 0.98
VARS2-209ENST00000477288 LRRC45Q96CN5 670 aa21.17■□□□□ 0.98
VARS2-209ENST00000477288 TRAF1Q13077 416 aa21.17■□□□□ 0.98
VARS2-209ENST00000477288 SPAG5Q96R06 1193 aa21.17■□□□□ 0.98
VARS2-209ENST00000477288 TMEM110-MUSTN1A8MSY1 372 aa21.17■□□□□ 0.98
VARS2-209ENST00000477288 NAPAP54920 295 aa21.17■□□□□ 0.98
VARS2-209ENST00000477288 SLC39A6Q13433 755 aa21.17■□□□□ 0.98
VARS2-209ENST00000477288 ZNF165P49910 485 aa21.17■□□□□ 0.98
VARS2-209ENST00000477288 ALG1Q9BT22 464 aa21.17■□□□□ 0.98
VARS2-209ENST00000477288 TCHPQ9BT92 498 aa21.17■□□□□ 0.98
VARS2-209ENST00000477288 CKAP4Q07065 602 aaKnown RBP21.16■□□□□ 0.98
VARS2-209ENST00000477288 PPP4R3BQ5MIZ7 849 aa21.16■□□□□ 0.98
VARS2-209ENST00000477288 CEP135Q66GS9 1140 aa21.16■□□□□ 0.98
VARS2-209ENST00000477288 GPATCH11Q8N954 259 aa21.16■□□□□ 0.98
VARS2-209ENST00000477288 FAM212AQ96EL1 285 aa21.16■□□□□ 0.98
VARS2-209ENST00000477288 GOLGA6L9A6NEM1 432 aa21.16■□□□□ 0.98
VARS2-209ENST00000477288 SYKP43405 635 aa21.16■□□□□ 0.98
VARS2-209ENST00000477288 NECAB1Q8N987 351 aa21.16■□□□□ 0.98
VARS2-209ENST00000477288 TOM1O60784 492 aa21.15■□□□□ 0.98
VARS2-209ENST00000477288 COPS6Q7L5N1 327 aa21.15■□□□□ 0.98
VARS2-209ENST00000477288 RHPN1Q8TCX5 695 aa21.15■□□□□ 0.98
VARS2-209ENST00000477288 CNNM2Q9H8M5 875 aa21.15■□□□□ 0.98
VARS2-209ENST00000477288 TTC22Q5TAA0 569 aa21.15■□□□□ 0.98
VARS2-209ENST00000477288 NDC80O14777 642 aa21.15■□□□□ 0.98
VARS2-209ENST00000477288 RBM25P49756 843 aaKnown RBP21.15■□□□□ 0.98
VARS2-209ENST00000477288 CALCOCO1Q9P1Z2 691 aa21.15■□□□□ 0.98
VARS2-209ENST00000477288 ATP10BO94823 1461 aa21.14■□□□□ 0.98
VARS2-209ENST00000477288 BMS1Q14692 1282 aaKnown RBP21.14■□□□□ 0.97
VARS2-209ENST00000477288 CCDC63Q8NA47 563 aa21.14■□□□□ 0.97
VARS2-209ENST00000477288 SRRTQ9BXP5 876 aaKnown RBP21.14■□□□□ 0.97
VARS2-209ENST00000477288 PARP3Q9Y6F1 533 aa21.14■□□□□ 0.97
VARS2-209ENST00000477288 ZFYP08048 801 aaPredicted RBP21.14■□□□□ 0.97
VARS2-209ENST00000477288 POLD1P28340 1107 aa21.14■□□□□ 0.97
VARS2-209ENST00000477288 DDB1Q16531 1140 aa21.13■□□□□ 0.97
VARS2-209ENST00000477288 GSTA5Q7RTV2 222 aa21.13■□□□□ 0.97
VARS2-209ENST00000477288 TBC1D2Q9BYX2 928 aa21.13■□□□□ 0.97
VARS2-209ENST00000477288 MAGEB6P1A0A0J9YX57 407 aa21.13■□□□□ 0.97
VARS2-209ENST00000477288 EHBP1Q8NDI1 1231 aa21.13■□□□□ 0.97
VARS2-209ENST00000477288 PLVAPQ9BX97 442 aa21.13■□□□□ 0.97
VARS2-209ENST00000477288 TFCP2L1Q9NZI6 479 aa21.13■□□□□ 0.97
VARS2-209ENST00000477288 FBLN1P23142 703 aa21.13■□□□□ 0.97
VARS2-209ENST00000477288 TMTC2Q8N394 836 aa21.13■□□□□ 0.97
VARS2-209ENST00000477288 RIMBP2O15034 1052 aa21.13■□□□□ 0.97
VARS2-209ENST00000477288 NCBP1Q09161 790 aaKnown RBP21.13■□□□□ 0.97
VARS2-209ENST00000477288 EEF2P13639 858 aaKnown RBP21.13■□□□□ 0.97
VARS2-209ENST00000477288 UBASH3AP57075 661 aa21.13■□□□□ 0.97
VARS2-209ENST00000477288 C6orf50Q9HD87 102 aa21.12■□□□□ 0.97
VARS2-209ENST00000477288 PLCH2O75038 1416 aa21.12■□□□□ 0.97
VARS2-209ENST00000477288 PTGS1P23219 599 aa21.12■□□□□ 0.97
VARS2-209ENST00000477288 SLC9C2Q5TAH2 1124 aa21.12■□□□□ 0.97
VARS2-209ENST00000477288 IMPG2Q9BZV3 1241 aa21.12■□□□□ 0.97
VARS2-209ENST00000477288 NSD2O96028 1365 aa21.12■□□□□ 0.97
VARS2-209ENST00000477288 GNAQP50148 359 aa21.12■□□□□ 0.97
VARS2-209ENST00000477288 LMBR1LQ6UX01 489 aa21.12■□□□□ 0.97
VARS2-209ENST00000477288 NYXQ9GZU5 481 aa21.12■□□□□ 0.97
VARS2-209ENST00000477288 ZSCAN16Q9H4T2 348 aaPredicted RBP21.12■□□□□ 0.97
VARS2-209ENST00000477288 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.12■□□□□ 0.971e-6■■■□□ 16.3
VARS2-209ENST00000477288 ASIC1P78348 528 aa21.12■□□□□ 0.97
VARS2-209ENST00000477288 ARID5AQ03989 594 aa21.12■□□□□ 0.97
VARS2-209ENST00000477288 GIMAP6Q6P9H5 292 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms