RNA–Protein interactions for RNA: ENST00000476824.1

ITGA4-208, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,004 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-208ENST00000476824 PDE12Q6L8Q7 609 aaKnown RBP6.73□□□□□ -1.33
ITGA4-208ENST00000476824 ELMSAN1Q6PJG2 1045 aa6.73□□□□□ -1.33
ITGA4-208ENST00000476824 C1orf127Q8N9H9 656 aa6.73□□□□□ -1.33
ITGA4-208ENST00000476824 DCAF5Q96JK2 942 aa6.73□□□□□ -1.33
ITGA4-208ENST00000476824 SMG9Q9H0W8 520 aaKnown RBP6.73□□□□□ -1.33
ITGA4-208ENST00000476824 SOWAHDA6NJG2 315 aa6.72□□□□□ -1.33
ITGA4-208ENST00000476824 SOX18P35713 384 aa6.72□□□□□ -1.33
ITGA4-208ENST00000476824 GRIK5Q16478 980 aa6.72□□□□□ -1.33
ITGA4-208ENST00000476824 KCTD17Q8N5Z5 321 aa6.72□□□□□ -1.33
ITGA4-208ENST00000476824 TRAIPQ9BWF2 469 aa6.72□□□□□ -1.33
ITGA4-208ENST00000476824 PRDM6Q9NQX0 595 aa6.72□□□□□ -1.33
ITGA4-208ENST00000476824 FOXD3Q9UJU5 478 aaPredicted RBP6.72□□□□□ -1.33
ITGA4-208ENST00000476824 GNEQ9Y223 722 aaKnown RBP6.72□□□□□ -1.33
ITGA4-208ENST00000476824 IVNS1ABPQ9Y6Y0 642 aa6.72□□□□□ -1.33
ITGA4-208ENST00000476824 KRBA1A5PL33 1030 aa6.71□□□□□ -1.34
ITGA4-208ENST00000476824 HOXD8P13378 290 aaPredicted RBP6.71□□□□□ -1.34
ITGA4-208ENST00000476824 ACPPP15309 386 aa6.71□□□□□ -1.34
ITGA4-208ENST00000476824 ATP11AP98196 1134 aa6.71□□□□□ -1.34
ITGA4-208ENST00000476824 PCSK7Q16549 785 aa6.71□□□□□ -1.34
ITGA4-208ENST00000476824 GJD3Q8N144 294 aa6.71□□□□□ -1.34
ITGA4-208ENST00000476824 TTC16Q8NEE8 873 aa6.71□□□□□ -1.34
ITGA4-208ENST00000476824 PLD4Q96BZ4 506 aa6.71□□□□□ -1.34
ITGA4-208ENST00000476824 CHRDQ9H2X0 955 aa6.71□□□□□ -1.34
ITGA4-208ENST00000476824 BRPF3Q9ULD4 1205 aa6.71□□□□□ -1.34
ITGA4-208ENST00000476824 TNFRSF21O75509 655 aa6.7□□□□□ -1.34
ITGA4-208ENST00000476824 GHRHP01286 108 aa6.7□□□□□ -1.34
ITGA4-208ENST00000476824 ITGB2P05107 769 aa6.7□□□□□ -1.34
ITGA4-208ENST00000476824 RPLP1P05386 114 aaKnown RBP6.7□□□□□ -1.34
ITGA4-208ENST00000476824 HYAL2Q12891 473 aa6.7□□□□□ -1.34
ITGA4-208ENST00000476824 XKR5Q6UX68 686 aa6.7□□□□□ -1.34
ITGA4-208ENST00000476824 ADAMTSL4Q6UY14 1074 aa6.7□□□□□ -1.34
ITGA4-208ENST00000476824 FRRS1LQ9P0K9 344 aa6.7□□□□□ -1.34
ITGA4-208ENST00000476824 TRAPPC3LQ5T215 181 aa6.69□□□□□ -1.34
ITGA4-208ENST00000476824 GDF6Q6KF10 455 aaPredicted RBP6.69□□□□□ -1.34
ITGA4-208ENST00000476824 NCAPG2Q86XI2 1143 aa6.69□□□□□ -1.34
ITGA4-208ENST00000476824 DMRTC2Q8IXT2 367 aaPredicted RBP6.69□□□□□ -1.34
ITGA4-208ENST00000476824 RASSF4Q9H2L5 321 aa6.69□□□□□ -1.34
ITGA4-208ENST00000476824 BIN2Q9UBW5 565 aaPredicted RBP6.69□□□□□ -1.34
ITGA4-208ENST00000476824 TRIM33Q9UPN9 1127 aa6.69□□□□□ -1.34
ITGA4-208ENST00000476824 EREGO14944 169 aa6.68□□□□□ -1.34
ITGA4-208ENST00000476824 PHACTR2O75167 634 aa6.68□□□□□ -1.34
ITGA4-208ENST00000476824 TRPA1O75762 1119 aa6.68□□□□□ -1.34
ITGA4-208ENST00000476824 KIF4AO95239 1232 aa6.68□□□□□ -1.34
ITGA4-208ENST00000476824 POLR3DP05423 398 aaPredicted RBP6.68□□□□□ -1.34
ITGA4-208ENST00000476824 CES1P23141 567 aa6.68□□□□□ -1.34
ITGA4-208ENST00000476824 USP5P45974 858 aa6.68□□□□□ -1.34
ITGA4-208ENST00000476824 NOP53Q9NZM5 478 aaKnown RBP6.68□□□□□ -1.34
ITGA4-208ENST00000476824 PIK3R2O00459 728 aa6.67□□□□□ -1.34
ITGA4-208ENST00000476824 NDUFB5O43674 189 aa6.67□□□□□ -1.34
ITGA4-208ENST00000476824 KCNA1Q09470 495 aa6.67□□□□□ -1.34
ITGA4-208ENST00000476824 PLA2G4EQ3MJ16 856 aa6.67□□□□□ -1.34
ITGA4-208ENST00000476824 MSL1Q68DK7 614 aa6.67□□□□□ -1.34
ITGA4-208ENST00000476824 AEBP1Q8IUX7 1158 aa6.67□□□□□ -1.34
ITGA4-208ENST00000476824 CEP120Q8N960 986 aa6.67□□□□□ -1.34
ITGA4-208ENST00000476824 HHIPQ96QV1 700 aa6.67□□□□□ -1.34
ITGA4-208ENST00000476824 SALL4Q9UJQ4 1053 aa6.67□□□□□ -1.34
ITGA4-208ENST00000476824 A0A0A0MRY4 1105 aa6.66□□□□□ -1.34
ITGA4-208ENST00000476824 GPR182O15218 404 aa6.66□□□□□ -1.34
ITGA4-208ENST00000476824 PDIA4P13667 645 aaKnown RBP6.66□□□□□ -1.34
ITGA4-208ENST00000476824 BAG6P46379 1132 aa6.66□□□□□ -1.34
ITGA4-208ENST00000476824 EHHADHQ08426 723 aa6.66□□□□□ -1.34
ITGA4-208ENST00000476824 ORC1Q13415 861 aa6.66□□□□□ -1.34
ITGA4-208ENST00000476824 GRIK4Q16099 956 aa6.66□□□□□ -1.34
ITGA4-208ENST00000476824 USPL1Q5W0Q7 1092 aa6.66□□□□□ -1.34
ITGA4-208ENST00000476824 CEP135Q66GS9 1140 aa6.66□□□□□ -1.34
ITGA4-208ENST00000476824 ILDR2Q71H61 639 aa6.66□□□□□ -1.34
ITGA4-208ENST00000476824 SNX29Q8TEQ0 813 aa6.66□□□□□ -1.34
ITGA4-208ENST00000476824 TTC9Q92623 222 aa6.66□□□□□ -1.34
ITGA4-208ENST00000476824 SPACA7Q96KW9 195 aa6.66□□□□□ -1.34
ITGA4-208ENST00000476824 LACRTQ9GZZ8 138 aa6.66□□□□□ -1.34
ITGA4-208ENST00000476824 RBSNQ9H1K0 784 aa6.66□□□□□ -1.34
ITGA4-208ENST00000476824 LATS2Q9NRM7 1088 aa6.66□□□□□ -1.34
ITGA4-208ENST00000476824 IGHA2P01877 340 aa6.65□□□□□ -1.34
ITGA4-208ENST00000476824 CHRNA4P43681 627 aa6.65□□□□□ -1.34
ITGA4-208ENST00000476824 TRIM28Q13263 835 aaKnown RBP6.65□□□□□ -1.34
ITGA4-208ENST00000476824 GPAT2Q6NUI2 795 aa6.65□□□□□ -1.34
ITGA4-208ENST00000476824 WFDC8Q8IUA0 241 aa6.65□□□□□ -1.34
ITGA4-208ENST00000476824 IL22RA1Q8N6P7 574 aa6.65□□□□□ -1.34
ITGA4-208ENST00000476824 TMC1Q8TDI8 760 aa6.65□□□□□ -1.34
ITGA4-208ENST00000476824 FAM129BQ96TA1 746 aa6.65□□□□□ -1.34
ITGA4-208ENST00000476824 PBX4Q9BYU1 374 aa6.65□□□□□ -1.34
ITGA4-208ENST00000476824 ZFYVE28Q9HCC9 887 aa6.65□□□□□ -1.34
ITGA4-208ENST00000476824 C1QTNF9BB2RNN3 333 aa6.64□□□□□ -1.35
ITGA4-208ENST00000476824 CDC25BP30305 580 aa6.64□□□□□ -1.35
ITGA4-208ENST00000476824 PRRT3Q5FWE3 981 aa6.64□□□□□ -1.35
ITGA4-208ENST00000476824 CD163Q86VB7 1156 aa6.64□□□□□ -1.35
ITGA4-208ENST00000476824 POP1Q99575 1024 aaKnown RBP6.64□□□□□ -1.35
ITGA4-208ENST00000476824 NIF3L1Q9GZT8 377 aa6.64□□□□□ -1.35
ITGA4-208ENST00000476824 SH2B1Q9NRF2 756 aaPredicted RBP6.64□□□□□ -1.35
ITGA4-208ENST00000476824 SPDYE3A6NKU9 549 aa6.63□□□□□ -1.35
ITGA4-208ENST00000476824 NFKBIEO00221 500 aa6.63□□□□□ -1.35
ITGA4-208ENST00000476824 DEAF1O75398 565 aaPredicted RBP6.63□□□□□ -1.35
ITGA4-208ENST00000476824 SPATA31C1P0DKV0 1188 aa6.63□□□□□ -1.35
ITGA4-208ENST00000476824 TXNDC11Q6PKC3 985 aa6.63□□□□□ -1.35
ITGA4-208ENST00000476824 SHISA2Q6UWI4 295 aa6.63□□□□□ -1.35
ITGA4-208ENST00000476824 FMR1NBQ8N0W7 255 aaPredicted RBP6.63□□□□□ -1.35
ITGA4-208ENST00000476824 ZKSCAN3Q9BRR0 538 aa6.63□□□□□ -1.35
ITGA4-208ENST00000476824 DZANK1Q9NVP4 752 aa6.63□□□□□ -1.35
ITGA4-208ENST00000476824 SMNDC1O75940 238 aaKnown RBP eCLIP6.62□□□□□ -1.35
ITGA4-208ENST00000476824 MAPK1P28482 360 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms