RNA–Protein interactions for RNA: ENST00000476744.5

CCNL1-218, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-218ENST00000476744 TBC1D9Q6ZT07 1266 aa10.01□□□□□ -0.81
CCNL1-218ENST00000476744 SV2AQ7L0J3 742 aa10.01□□□□□ -0.81
CCNL1-218ENST00000476744 VWA5B2Q8N398 1253 aa10.01□□□□□ -0.81
CCNL1-218ENST00000476744 EXOC6Q8TAG9 804 aa10.01□□□□□ -0.81
CCNL1-218ENST00000476744 NANOS1Q8WY41 292 aaKnown RBP10.01□□□□□ -0.81
CCNL1-218ENST00000476744 FHDC1Q9C0D6 1143 aaPredicted RBP10.01□□□□□ -0.81
CCNL1-218ENST00000476744 TIMMDC1Q9NPL8 285 aa10.01□□□□□ -0.81
CCNL1-218ENST00000476744 HRH3Q9Y5N1 445 aa10.01□□□□□ -0.81
CCNL1-218ENST00000476744 RGPD1P0DJD0 1748 aa10.01□□□□□ -0.81
CCNL1-218ENST00000476744 KDM2BQ8NHM5 1336 aa10.01□□□□□ -0.81
CCNL1-218ENST00000476744 ZMYM3Q14202 1370 aa10.01□□□□□ -0.81
CCNL1-218ENST00000476744 CDK12Q9NYV4 1490 aaPredicted RBP10□□□□□ -0.81
CCNL1-218ENST00000476744 USP17L3A6NCW0 530 aa10□□□□□ -0.81
CCNL1-218ENST00000476744 USP17L4A6NCW7 530 aa10□□□□□ -0.81
CCNL1-218ENST00000476744 ATP9BO43861 1147 aa10□□□□□ -0.81
CCNL1-218ENST00000476744 WDR44Q5JSH3 913 aa10□□□□□ -0.81
CCNL1-218ENST00000476744 USP17L2Q6R6M4 530 aa10□□□□□ -0.81
CCNL1-218ENST00000476744 USP17L1Q7RTZ2 530 aa10□□□□□ -0.81
CCNL1-218ENST00000476744 MORC1Q86VD1 984 aa10□□□□□ -0.81
CCNL1-218ENST00000476744 CALR3Q96L12 384 aaKnown RBP10□□□□□ -0.81
CCNL1-218ENST00000476744 GAS2L1Q99501 681 aaPredicted RBP10□□□□□ -0.81
CCNL1-218ENST00000476744 DYRK1BQ9Y463 629 aa10□□□□□ -0.81
CCNL1-218ENST00000476744 TNRQ92752 1358 aa10□□□□□ -0.81
CCNL1-218ENST00000476744 EDC4Q6P2E9 1401 aaKnown RBP9.99□□□□□ -0.81
CCNL1-218ENST00000476744 ADAMTS13Q76LX8 1427 aa9.99□□□□□ -0.81
CCNL1-218ENST00000476744 TRIM50Q86XT4 487 aa9.99□□□□□ -0.81
CCNL1-218ENST00000476744 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.99□□□□□ -0.81
CCNL1-218ENST00000476744 RUNDC1Q96C34 613 aa9.99□□□□□ -0.81
CCNL1-218ENST00000476744 PCDHGA11Q9Y5H2 935 aa9.99□□□□□ -0.81
CCNL1-218ENST00000476744 APAF1O14727 1248 aa9.98□□□□□ -0.81
CCNL1-218ENST00000476744 TCERG1O14776 1098 aaKnown RBP9.98□□□□□ -0.81
CCNL1-218ENST00000476744 PHKA2P46019 1235 aa9.98□□□□□ -0.81
CCNL1-218ENST00000476744 PLEKHM2Q8IWE5 1019 aa9.98□□□□□ -0.81
CCNL1-218ENST00000476744 WDR63Q8IWG1 891 aa9.98□□□□□ -0.81
CCNL1-218ENST00000476744 GPR161Q8N6U8 529 aaKnown RBP9.98□□□□□ -0.81
CCNL1-218ENST00000476744 SERTAD1Q9UHV2 236 aa9.98□□□□□ -0.81
CCNL1-218ENST00000476744 TMEM2Q9UHN6 1383 aa9.98□□□□□ -0.81
CCNL1-218ENST00000476744 MARF1Q9Y4F3 1742 aaKnown RBP9.97□□□□□ -0.81
CCNL1-218ENST00000476744 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.97□□□□□ -0.81
CCNL1-218ENST00000476744 RHBDD1Q8TEB9 315 aa9.97□□□□□ -0.81
CCNL1-218ENST00000476744 CFAP53Q96M91 514 aa9.97□□□□□ -0.81
CCNL1-218ENST00000476744 PRAM1Q96QH2 718 aa9.97□□□□□ -0.81
CCNL1-218ENST00000476744 ANP32EQ9BTT0 268 aa9.97□□□□□ -0.81
CCNL1-218ENST00000476744 CUEDC1Q9NWM3 386 aaPredicted RBP9.97□□□□□ -0.81
CCNL1-218ENST00000476744 TERF2IPQ9NYB0 399 aa9.97□□□□□ -0.81
CCNL1-218ENST00000476744 AATKQ6ZMQ8 1374 aa9.97□□□□□ -0.81
CCNL1-218ENST00000476744 PLEKHG1Q9ULL1 1385 aa9.97□□□□□ -0.81
CCNL1-218ENST00000476744 PTCH1Q13635 1447 aa9.97□□□□□ -0.81
CCNL1-218ENST00000476744 PPIP5K1Q6PFW1 1433 aa9.97□□□□□ -0.81
CCNL1-218ENST00000476744 TMEM229AB2RXF0 380 aa9.96□□□□□ -0.82
CCNL1-218ENST00000476744 MTHFSP49914 203 aa9.96□□□□□ -0.82
CCNL1-218ENST00000476744 SMTNP53814 917 aa9.96□□□□□ -0.82
CCNL1-218ENST00000476744 C4orf17Q53FE4 359 aa9.96□□□□□ -0.82
CCNL1-218ENST00000476744 CRBNQ96SW2 442 aa9.96□□□□□ -0.82
CCNL1-218ENST00000476744 H7C1W4 665 aa9.95□□□□□ -0.82
CCNL1-218ENST00000476744 ATP1A2P50993 1020 aa9.95□□□□□ -0.82
CCNL1-218ENST00000476744 AAMPQ13685 434 aa9.95□□□□□ -0.82
CCNL1-218ENST00000476744 PDE3AQ14432 1141 aa9.95□□□□□ -0.82
CCNL1-218ENST00000476744 TRIM22Q8IYM9 498 aa9.95□□□□□ -0.82
CCNL1-218ENST00000476744 GMCL1Q96IK5 515 aa9.95□□□□□ -0.82
CCNL1-218ENST00000476744 CNTNAP3BQ96NU0 1288 aa9.95□□□□□ -0.82
CCNL1-218ENST00000476744 COL25A1Q9BXS0 654 aaPredicted RBP9.95□□□□□ -0.82
CCNL1-218ENST00000476744 CNTNAP3Q9BZ76 1288 aa9.95□□□□□ -0.82
CCNL1-218ENST00000476744 METP08581 1390 aa9.95□□□□□ -0.82
CCNL1-218ENST00000476744 RGPD8O14715 1765 aaPredicted RBP9.94□□□□□ -0.82
CCNL1-218ENST00000476744 IL16Q14005 1332 aa9.94□□□□□ -0.82
CCNL1-218ENST00000476744 A0A1B0GTH6 734 aa9.94□□□□□ -0.82
CCNL1-218ENST00000476744 BACH1O14867 736 aa9.94□□□□□ -0.82
CCNL1-218ENST00000476744 FYB1O15117 783 aa9.94□□□□□ -0.82
CCNL1-218ENST00000476744 F11P03951 625 aa9.94□□□□□ -0.82
CCNL1-218ENST00000476744 CT47B1P0C2W7 299 aaPredicted RBP9.94□□□□□ -0.82
CCNL1-218ENST00000476744 CCDC146Q8IYE0 955 aa9.94□□□□□ -0.82
CCNL1-218ENST00000476744 ZSCAN1Q8NBB4 408 aa9.94□□□□□ -0.82
CCNL1-218ENST00000476744 ZNF837Q96EG3 531 aaPredicted RBP9.94□□□□□ -0.82
CCNL1-218ENST00000476744 PLEKHF1Q96S99 279 aa9.94□□□□□ -0.82
CCNL1-218ENST00000476744 GPAMQ9HCL2 828 aa9.94□□□□□ -0.82
CCNL1-218ENST00000476744 TFIP11Q9UBB9 837 aaKnown RBP9.94□□□□□ -0.82
CCNL1-218ENST00000476744 CHD2O14647 1828 aaKnown RBP9.93□□□□□ -0.82
CCNL1-218ENST00000476744 PLA2G4AP47712 749 aa9.93□□□□□ -0.82
CCNL1-218ENST00000476744 FOXR1Q6PIV2 292 aa9.93□□□□□ -0.82
CCNL1-218ENST00000476744 CENPQQ7L2Z9 268 aaPredicted RBP9.93□□□□□ -0.82
CCNL1-218ENST00000476744 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.93□□□□□ -0.82
CCNL1-218ENST00000476744 MKRN1Q9UHC7 482 aaKnown RBP9.93□□□□□ -0.82
CCNL1-218ENST00000476744 PEAK1Q9H792 1746 aa9.93□□□□□ -0.82
CCNL1-218ENST00000476744 A6NJY4 79 aa9.92□□□□□ -0.82
CCNL1-218ENST00000476744 SRPK2P78362 688 aaKnown RBP9.92□□□□□ -0.82
CCNL1-218ENST00000476744 DBN1Q16643 649 aa9.92□□□□□ -0.82
CCNL1-218ENST00000476744 C20orf194Q5TEA3 1177 aa9.92□□□□□ -0.82
CCNL1-218ENST00000476744 HDGFL2Q7Z4V5 671 aaPredicted RBP9.92□□□□□ -0.82
CCNL1-218ENST00000476744 TCP11L2Q8N4U5 519 aa9.92□□□□□ -0.82
CCNL1-218ENST00000476744 TPCN2Q8NHX9 752 aa9.92□□□□□ -0.82
CCNL1-218ENST00000476744 SLC4A9Q96Q91 983 aa9.92□□□□□ -0.82
CCNL1-218ENST00000476744 CDK19Q9BWU1 502 aa9.92□□□□□ -0.82
CCNL1-218ENST00000476744 NIFKQ9BYG3 293 aaKnown RBP9.92□□□□□ -0.82
CCNL1-218ENST00000476744 DNAAF2Q9NVR5 837 aaKnown RBP9.92□□□□□ -0.82
CCNL1-218ENST00000476744 ZNF358Q9NW07 568 aa9.92□□□□□ -0.82
CCNL1-218ENST00000476744 POGKQ9P215 609 aa9.92□□□□□ -0.82
CCNL1-218ENST00000476744 STK17AQ9UEE5 414 aa9.92□□□□□ -0.82
CCNL1-218ENST00000476744 MAFBQ9Y5Q3 323 aaPredicted RBP9.92□□□□□ -0.82
CCNL1-218ENST00000476744 CEP170BQ9Y4F5 1589 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms