RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 KCNQ5Q9NR82 932 aa13.79□□□□□ -0.2
SEC13-214ENST00000476597 CNOT7Q9UIV1 285 aaKnown RBP13.79□□□□□ -0.2
SEC13-214ENST00000476597 GGA1Q9UJY5 639 aa13.79□□□□□ -0.2
SEC13-214ENST00000476597 ZNF521Q96K83 1311 aa13.79□□□□□ -0.2
SEC13-214ENST00000476597 DUOX1Q9NRD9 1551 aa13.79□□□□□ -0.2
SEC13-214ENST00000476597 PSMD14O00487 310 aa13.78□□□□□ -0.2
SEC13-214ENST00000476597 ECE2O60344 883 aa13.78□□□□□ -0.2
SEC13-214ENST00000476597 HIRAP54198 1017 aaPredicted RBP13.78□□□□□ -0.2
SEC13-214ENST00000476597 UBE3BQ7Z3V4 1068 aa13.78□□□□□ -0.2
SEC13-214ENST00000476597 GREM2Q9H772 168 aa13.78□□□□□ -0.2
SEC13-214ENST00000476597 BSDC1Q9NW68 430 aaPredicted RBP13.78□□□□□ -0.2
SEC13-214ENST00000476597 ZBTB12Q9Y330 459 aaPredicted RBP13.78□□□□□ -0.2
SEC13-214ENST00000476597 LTBP1Q14766 1721 aa13.78□□□□□ -0.2
SEC13-214ENST00000476597 ADAMTSL1Q8N6G6 1762 aa13.78□□□□□ -0.2
SEC13-214ENST00000476597 H7C1D1 291 aa13.77□□□□□ -0.21
SEC13-214ENST00000476597 UFL1O94874 794 aa13.77□□□□□ -0.21
SEC13-214ENST00000476597 CSF1RP07333 972 aa13.77□□□□□ -0.21
SEC13-214ENST00000476597 ATP2B4P23634 1241 aa13.77□□□□□ -0.21
SEC13-214ENST00000476597 XDHP47989 1333 aa13.77□□□□□ -0.21
SEC13-214ENST00000476597 CNTNAP1P78357 1384 aa13.77□□□□□ -0.21
SEC13-214ENST00000476597 FMR1Q06787 632 aaKnown RBP eCLIP13.77□□□□□ -0.21
SEC13-214ENST00000476597 BEND3Q5T5X7 828 aa13.77□□□□□ -0.21
SEC13-214ENST00000476597 IFFO2Q5TF58 517 aa13.77□□□□□ -0.21
SEC13-214ENST00000476597 RTL9Q8NET4 1388 aa13.77□□□□□ -0.21
SEC13-214ENST00000476597 ZC3H15Q8WU90 426 aaKnown RBP13.77□□□□□ -0.21
SEC13-214ENST00000476597 MINPP1Q9UNW1 487 aa13.77□□□□□ -0.21
SEC13-214ENST00000476597 TAF1P21675 1872 aa13.76□□□□□ -0.21
SEC13-214ENST00000476597 SHTN1A0MZ66 631 aa13.76□□□□□ -0.21
SEC13-214ENST00000476597 VIL1P09327 827 aaKnown RBP13.76□□□□□ -0.21
SEC13-214ENST00000476597 RPS12P25398 132 aaKnown RBP13.76□□□□□ -0.21
SEC13-214ENST00000476597 VEGFBP49765 207 aa13.76□□□□□ -0.21
SEC13-214ENST00000476597 MICALL2Q8IY33 904 aa13.76□□□□□ -0.21
SEC13-214ENST00000476597 LRRC37AA6NMS7 1700 aa13.76□□□□□ -0.21
SEC13-214ENST00000476597 WTIPA6NIX2 430 aaPredicted RBP13.75□□□□□ -0.21
SEC13-214ENST00000476597 RASSF10A6NK89 507 aa13.75□□□□□ -0.21
SEC13-214ENST00000476597 F6X3S4 739 aa13.75□□□□□ -0.21
SEC13-214ENST00000476597 DEFB115Q30KQ5 88 aa13.75□□□□□ -0.21
SEC13-214ENST00000476597 CST9Q5W186 159 aa13.75□□□□□ -0.21
SEC13-214ENST00000476597 TRPM4Q8TD43 1214 aa13.75□□□□□ -0.21
SEC13-214ENST00000476597 G3V3G9 751 aa13.74□□□□□ -0.21
SEC13-214ENST00000476597 TRAF5O00463 557 aa13.74□□□□□ -0.21
SEC13-214ENST00000476597 HSPA1AP0DMV8 641 aaKnown RBP13.74□□□□□ -0.21
SEC13-214ENST00000476597 HSPA1BP0DMV9 641 aaKnown RBP13.74□□□□□ -0.21
SEC13-214ENST00000476597 ITGA6P23229 1130 aa13.74□□□□□ -0.21
SEC13-214ENST00000476597 IGHMBP2P38935 993 aaKnown RBP13.74□□□□□ -0.21
SEC13-214ENST00000476597 DCAF8Q5TAQ9 597 aa13.74□□□□□ -0.21
SEC13-214ENST00000476597 SAMD7Q7Z3H4 446 aa13.74□□□□□ -0.21
SEC13-214ENST00000476597 CCT4P50991 539 aaKnown RBP13.73□□□□□ -0.21
SEC13-214ENST00000476597 FOXO4P98177 505 aa13.73□□□□□ -0.21
SEC13-214ENST00000476597 CDC37L1Q7L3B6 337 aa13.73□□□□□ -0.21
SEC13-214ENST00000476597 PODNQ7Z5L7 613 aa13.73□□□□□ -0.21
SEC13-214ENST00000476597 GLIS2Q9BZE0 524 aaPredicted RBP13.73□□□□□ -0.21
SEC13-214ENST00000476597 ABT1Q9ULW3 272 aaKnown RBP13.73□□□□□ -0.21
SEC13-214ENST00000476597 LEMD3Q9Y2U8 911 aa13.73□□□□□ -0.21
SEC13-214ENST00000476597 FAM161AQ3B820 660 aa13.72□□□□□ -0.21
SEC13-214ENST00000476597 TBC1D10BQ4KMP7 808 aaPredicted RBP13.72□□□□□ -0.21
SEC13-214ENST00000476597 COL13A1Q5TAT6 717 aaPredicted RBP13.72□□□□□ -0.21
SEC13-214ENST00000476597 E9PSI1 815 aa13.71□□□□□ -0.21
SEC13-214ENST00000476597 ALDH1L1O75891 902 aa13.71□□□□□ -0.21
SEC13-214ENST00000476597 EGFRP00533 1210 aa13.71□□□□□ -0.21
SEC13-214ENST00000476597 SLFN5Q08AF3 891 aa13.71□□□□□ -0.21
SEC13-214ENST00000476597 RBM26Q5T8P6 1007 aaKnown RBP13.71□□□□□ -0.21
SEC13-214ENST00000476597 RSBN1LQ6PCB5 846 aaPredicted RBP13.71□□□□□ -0.21
SEC13-214ENST00000476597 MRPL50Q8N5N7 158 aaKnown RBP13.71□□□□□ -0.21
SEC13-214ENST00000476597 AGBL3Q8NEM8 1001 aa13.71□□□□□ -0.21
SEC13-214ENST00000476597 GMLQ99445 158 aa13.71□□□□□ -0.21
SEC13-214ENST00000476597 MPHOSPH8Q99549 860 aa13.71□□□□□ -0.21
SEC13-214ENST00000476597 ANKRD2Q9GZV1 360 aa13.71□□□□□ -0.21
SEC13-214ENST00000476597 TLL2Q9Y6L7 1015 aa13.71□□□□□ -0.21
SEC13-214ENST00000476597 MED23Q9ULK4 1368 aa13.71□□□□□ -0.22
SEC13-214ENST00000476597 WDR33Q9C0J8 1336 aaKnown RBP13.7□□□□□ -0.22
SEC13-214ENST00000476597 ANKRD18BA2A2Z9 1011 aa13.7□□□□□ -0.22
SEC13-214ENST00000476597 USP17L3A6NCW0 530 aa13.7□□□□□ -0.22
SEC13-214ENST00000476597 USP17L4A6NCW7 530 aa13.7□□□□□ -0.22
SEC13-214ENST00000476597 GRM8O00222 908 aa13.7□□□□□ -0.22
SEC13-214ENST00000476597 CELF2O95319 508 aaKnown RBP13.7□□□□□ -0.22
SEC13-214ENST00000476597 ZNF280AP59817 542 aaPredicted RBP13.7□□□□□ -0.22
SEC13-214ENST00000476597 EPHA10Q5JZY3 1008 aa13.7□□□□□ -0.22
SEC13-214ENST00000476597 USP17L1Q7RTZ2 530 aa13.7□□□□□ -0.22
SEC13-214ENST00000476597 USP48Q86UV5 1035 aa13.7□□□□□ -0.22
SEC13-214ENST00000476597 ZNF804BA4D1E1 1349 aa13.69□□□□□ -0.22
SEC13-214ENST00000476597 CCER2I3L3R5 266 aa13.69□□□□□ -0.22
SEC13-214ENST00000476597 IFIT5Q13325 482 aaKnown RBP13.69□□□□□ -0.22
SEC13-214ENST00000476597 SLC4A10Q6U841 1118 aa13.69□□□□□ -0.22
SEC13-214ENST00000476597 LMBR1LQ6UX01 489 aa13.69□□□□□ -0.22
SEC13-214ENST00000476597 SAPCD2Q86UD0 394 aa13.69□□□□□ -0.22
SEC13-214ENST00000476597 TXNRD3Q86VQ6 643 aa13.69□□□□□ -0.22
SEC13-214ENST00000476597 SRCIN1Q9C0H9 1055 aa13.69□□□□□ -0.22
SEC13-214ENST00000476597 COA1Q9GZY4 146 aa13.69□□□□□ -0.22
SEC13-214ENST00000476597 WBP1LQ9NX94 342 aa13.69□□□□□ -0.22
SEC13-214ENST00000476597 C9orf78Q9NZ63 289 aaPredicted RBP13.69□□□□□ -0.22
SEC13-214ENST00000476597 CHRNDQ07001 517 aa13.68□□□□□ -0.22
SEC13-214ENST00000476597 KIF4BQ2VIQ3 1234 aa13.68□□□□□ -0.22
SEC13-214ENST00000476597 DLK2Q6UY11 383 aa13.68□□□□□ -0.22
SEC13-214ENST00000476597 TRMT2AQ8IZ69 625 aaKnown RBP13.68□□□□□ -0.22
SEC13-214ENST00000476597 DCPSQ96C86 337 aaKnown RBP13.68□□□□□ -0.22
SEC13-214ENST00000476597 CDCA7LQ96GN5 454 aa13.68□□□□□ -0.22
SEC13-214ENST00000476597 CAPNS2Q96L46 248 aa13.68□□□□□ -0.22
SEC13-214ENST00000476597 ZNF609O15014 1411 aa13.67□□□□□ -0.22
SEC13-214ENST00000476597 FOXN1O15353 648 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms