RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 CXorf38Q8TB03 319 aa4.86□□□□□ -1.63
CD55-208ENST00000476590 ZNF483Q8TF39 744 aaPredicted RBP4.86□□□□□ -1.63
CD55-208ENST00000476590 CRACR2AQ9BSW2 395 aa4.86□□□□□ -1.63
CD55-208ENST00000476590 REPIN1Q9BWE0 567 aaKnown RBP4.86□□□□□ -1.63
CD55-208ENST00000476590 ZSCAN16Q9H4T2 348 aaPredicted RBP4.86□□□□□ -1.63
CD55-208ENST00000476590 VRTNQ9H8Y1 702 aa4.86□□□□□ -1.63
CD55-208ENST00000476590 BLOC1S6Q9UL45 172 aa4.86□□□□□ -1.63
CD55-208ENST00000476590 FRMD4BQ9Y2L6 1034 aa4.86□□□□□ -1.63
CD55-208ENST00000476590 LRPPRCP42704 1394 aaKnown RBP4.86□□□□□ -1.63
CD55-208ENST00000476590 PTPRCP08575 1304 aa4.86□□□□□ -1.63
CD55-208ENST00000476590 SOS1Q07889 1333 aaPredicted RBP4.86□□□□□ -1.63
CD55-208ENST00000476590 ABCC8Q09428 1581 aa4.85□□□□□ -1.63
CD55-208ENST00000476590 BAZ1AQ9NRL2 1556 aaPredicted RBP4.85□□□□□ -1.63
CD55-208ENST00000476590 TMEM88BA6NKF7 163 aa4.85□□□□□ -1.63
CD55-208ENST00000476590 EIF3CLB5ME19 914 aaKnown RBP4.85□□□□□ -1.63
CD55-208ENST00000476590 CREB3O43889 395 aa4.85□□□□□ -1.63
CD55-208ENST00000476590 RDXP35241 583 aaKnown RBP4.85□□□□□ -1.63
CD55-208ENST00000476590 PRPHP41219 470 aa4.85□□□□□ -1.63
CD55-208ENST00000476590 MNAT1P51948 309 aa4.85□□□□□ -1.63
CD55-208ENST00000476590 MCCD1P59942 119 aaPredicted RBP4.85□□□□□ -1.63
CD55-208ENST00000476590 PSME1Q06323 249 aa4.85□□□□□ -1.63
CD55-208ENST00000476590 NEDD9Q14511 834 aa4.85□□□□□ -1.63
CD55-208ENST00000476590 CRYMQ14894 314 aa4.85□□□□□ -1.63
CD55-208ENST00000476590 HSP90B2PQ58FF3 399 aa4.85□□□□□ -1.63
CD55-208ENST00000476590 TYW1BQ6NUM6 668 aa4.85□□□□□ -1.63
CD55-208ENST00000476590 MICALL1Q8N3F8 863 aa4.85□□□□□ -1.63
CD55-208ENST00000476590 PRPF38AQ8NAV1 312 aaKnown RBP4.85□□□□□ -1.63
CD55-208ENST00000476590 KIAA1524Q8TCG1 905 aa4.85□□□□□ -1.63
CD55-208ENST00000476590 HPS1Q92902 700 aa4.85□□□□□ -1.63
CD55-208ENST00000476590 EIF3CQ99613 913 aaKnown RBP4.85□□□□□ -1.63
CD55-208ENST00000476590 SLX1AQ9BQ83 275 aa4.85□□□□□ -1.63
CD55-208ENST00000476590 IQCGQ9H095 443 aaKnown RBP4.85□□□□□ -1.63
CD55-208ENST00000476590 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.85□□□□□ -1.63
CD55-208ENST00000476590 RTEL1-TNFRSF6BF6WH68 1400 aa4.85□□□□□ -1.63
CD55-208ENST00000476590 PLEKHH1Q9ULM0 1364 aa4.85□□□□□ -1.63
CD55-208ENST00000476590 CCDC194A0A1B0GVG4 234 aa4.85□□□□□ -1.63
CD55-208ENST00000476590 KIF2AO00139 706 aaPredicted RBP4.85□□□□□ -1.63
CD55-208ENST00000476590 SMAPO00193 183 aa4.85□□□□□ -1.63
CD55-208ENST00000476590 PLIN1O60240 522 aa4.85□□□□□ -1.63
CD55-208ENST00000476590 RNF40O75150 1001 aa4.85□□□□□ -1.63
CD55-208ENST00000476590 ZRANB2O95218 330 aaKnown RBP eCLIP4.85□□□□□ -1.63
CD55-208ENST00000476590 RHBDL3P58872 404 aa4.85□□□□□ -1.63
CD55-208ENST00000476590 DSG2Q14126 1118 aa4.85□□□□□ -1.63
CD55-208ENST00000476590 CFAP70Q5T0N1 1121 aa4.85□□□□□ -1.63
CD55-208ENST00000476590 CCDC181Q5TID7 509 aa4.85□□□□□ -1.63
CD55-208ENST00000476590 ZKSCAN2Q63HK3 967 aa4.85□□□□□ -1.63
CD55-208ENST00000476590 CCDC112Q8NEF3 446 aa4.85□□□□□ -1.63
CD55-208ENST00000476590 SPACA7Q96KW9 195 aa4.85□□□□□ -1.63
CD55-208ENST00000476590 BAG1Q99933 345 aaPredicted RBP4.85□□□□□ -1.63
CD55-208ENST00000476590 LNPKQ9C0E8 428 aa4.85□□□□□ -1.63
CD55-208ENST00000476590 CWC25Q9NXE8 425 aaPredicted RBP4.85□□□□□ -1.63
CD55-208ENST00000476590 PCDHB3Q9Y5E6 796 aa4.85□□□□□ -1.63
CD55-208ENST00000476590 NCKAP5LQ9HCH0 1330 aa4.85□□□□□ -1.63
CD55-208ENST00000476590 SYNRGQ9UMZ2 1314 aa4.85□□□□□ -1.63
CD55-208ENST00000476590 BAG4O95429 457 aaKnown RBP4.84□□□□□ -1.63
CD55-208ENST00000476590 ACTN2P35609 894 aa4.84□□□□□ -1.63
CD55-208ENST00000476590 EIF4G2P78344 907 aaKnown RBP eCLIP4.84□□□□□ -1.63
CD55-208ENST00000476590 TTLL12Q14166 644 aaPredicted RBP4.84□□□□□ -1.63
CD55-208ENST00000476590 PDIA5Q14554 519 aa4.84□□□□□ -1.63
CD55-208ENST00000476590 HSP90AB2PQ58FF8 381 aa4.84□□□□□ -1.63
CD55-208ENST00000476590 ZFYVE27Q5T4F4 411 aa4.84□□□□□ -1.63
CD55-208ENST00000476590 HHATQ5VTY9 493 aa4.84□□□□□ -1.63
CD55-208ENST00000476590 ERC1Q8IUD2 1116 aa4.84□□□□□ -1.63
CD55-208ENST00000476590 C17orf53Q8N3J3 647 aaPredicted RBP4.84□□□□□ -1.63
CD55-208ENST00000476590 SNRNP27Q8WVK2 155 aaKnown RBP4.84□□□□□ -1.63
CD55-208ENST00000476590 C17orf50Q8WW18 174 aa4.84□□□□□ -1.63
CD55-208ENST00000476590 SMARCE1Q969G3 411 aa4.84□□□□□ -1.63
CD55-208ENST00000476590 DHX29Q7Z478 1369 aaKnown RBP4.84□□□□□ -1.63
CD55-208ENST00000476590 A0A087WUV0 522 aaPredicted RBP4.84□□□□□ -1.64
CD55-208ENST00000476590 EVI5O60447 810 aa4.84□□□□□ -1.64
CD55-208ENST00000476590 PECAM1P16284 738 aaPredicted RBP4.84□□□□□ -1.64
CD55-208ENST00000476590 FECHP22830 423 aa4.84□□□□□ -1.64
CD55-208ENST00000476590 CHMLP26374 656 aa4.84□□□□□ -1.64
CD55-208ENST00000476590 C9orf131Q5VYM1 1079 aa4.84□□□□□ -1.64
CD55-208ENST00000476590 FBXO38Q6PIJ6 1188 aa4.84□□□□□ -1.64
CD55-208ENST00000476590 MYLK4Q86YV6 388 aaPredicted RBP4.84□□□□□ -1.64
CD55-208ENST00000476590 ANKRD18AQ8IVF6 992 aa4.84□□□□□ -1.64
CD55-208ENST00000476590 OGFOD1Q8N543 542 aa4.84□□□□□ -1.64
CD55-208ENST00000476590 ADAMTS19Q8TE59 1207 aa4.84□□□□□ -1.64
CD55-208ENST00000476590 KCNB2Q92953 911 aa4.84□□□□□ -1.64
CD55-208ENST00000476590 GTF3C6Q969F1 213 aa4.84□□□□□ -1.64
CD55-208ENST00000476590 EXOC4Q96A65 974 aa4.84□□□□□ -1.64
CD55-208ENST00000476590 CCDC34Q96HJ3 373 aa4.84□□□□□ -1.64
CD55-208ENST00000476590 AGAP3Q96P47 875 aa4.84□□□□□ -1.64
CD55-208ENST00000476590 PLEKHG4BQ96PX9 1271 aa4.84□□□□□ -1.64
CD55-208ENST00000476590 C22orf23Q9BZE7 217 aa4.84□□□□□ -1.64
CD55-208ENST00000476590 UBA5Q9GZZ9 404 aa4.84□□□□□ -1.64
CD55-208ENST00000476590 FAM107BQ9H098 131 aa4.84□□□□□ -1.64
CD55-208ENST00000476590 TTC12Q9H892 705 aaPredicted RBP4.84□□□□□ -1.64
CD55-208ENST00000476590 MTUS2Q5JR59 1369 aa4.83□□□□□ -1.64
CD55-208ENST00000476590 MIA2Q96PC5 1412 aa4.83□□□□□ -1.64
CD55-208ENST00000476590 RPS6KA5O75582 802 aa4.83□□□□□ -1.64
CD55-208ENST00000476590 AP1G2O75843 785 aa4.83□□□□□ -1.64
CD55-208ENST00000476590 RECKO95980 971 aa4.83□□□□□ -1.64
CD55-208ENST00000476590 ALDH1B1P30837 517 aa4.83□□□□□ -1.64
CD55-208ENST00000476590 PLA2G4AP47712 749 aa4.83□□□□□ -1.64
CD55-208ENST00000476590 LONRF3Q496Y0 759 aa4.83□□□□□ -1.64
CD55-208ENST00000476590 CCDC178Q5BJE1 867 aa4.83□□□□□ -1.64
CD55-208ENST00000476590 TADA2BQ86TJ2 420 aa4.83□□□□□ -1.64
CD55-208ENST00000476590 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms