RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 SP8Q8IXZ3 490 aa8.74□□□□□ -1.01
CLDN4-205ENST00000476494 RBM17Q96I25 401 aaKnown RBP8.74□□□□□ -1.01
CLDN4-205ENST00000476494 ALPK3Q96L96 1907 aa8.74□□□□□ -1.01
CLDN4-205ENST00000476494 VIL1P09327 827 aaKnown RBP8.73□□□□□ -1.01
CLDN4-205ENST00000476494 INHBEP58166 350 aa8.73□□□□□ -1.01
CLDN4-205ENST00000476494 ZNF280AP59817 542 aaPredicted RBP8.73□□□□□ -1.01
CLDN4-205ENST00000476494 SP3Q02447 781 aa8.73□□□□□ -1.01
CLDN4-205ENST00000476494 SCARF1Q14162 830 aa8.73□□□□□ -1.01
CLDN4-205ENST00000476494 MTHFSDQ2M296 383 aaKnown RBP8.73□□□□□ -1.01
CLDN4-205ENST00000476494 DPP8Q6V1X1 898 aaPredicted RBP8.73□□□□□ -1.01
CLDN4-205ENST00000476494 TTC5Q8N0Z6 440 aa8.73□□□□□ -1.01
CLDN4-205ENST00000476494 IL17REQ8NFR9 667 aa8.73□□□□□ -1.01
CLDN4-205ENST00000476494 FAM122AQ96E09 287 aa8.73□□□□□ -1.01
CLDN4-205ENST00000476494 GUCD1Q96NT3 240 aa8.73□□□□□ -1.01
CLDN4-205ENST00000476494 SCAF8Q9UPN6 1271 aaKnown RBP8.73□□□□□ -1.01
CLDN4-205ENST00000476494 NR2E3Q9Y5X4 410 aa8.73□□□□□ -1.01
CLDN4-205ENST00000476494 POTEB2H3BUK9 544 aa8.72□□□□□ -1.01
CLDN4-205ENST00000476494 GTF2E1P29083 439 aaPredicted RBP8.72□□□□□ -1.01
CLDN4-205ENST00000476494 CRHR2Q13324 411 aa8.72□□□□□ -1.01
CLDN4-205ENST00000476494 FMNL2Q96PY5 1086 aa8.72□□□□□ -1.01
CLDN4-205ENST00000476494 NYXQ9GZU5 481 aa8.72□□□□□ -1.01
CLDN4-205ENST00000476494 ABCC4O15439 1325 aa8.72□□□□□ -1.01
CLDN4-205ENST00000476494 UBN2Q6ZU65 1347 aa8.72□□□□□ -1.01
CLDN4-205ENST00000476494 SYNGAP1Q96PV0 1343 aa8.72□□□□□ -1.01
CLDN4-205ENST00000476494 NCOR1O75376 2440 aa8.72□□□□□ -1.01
CLDN4-205ENST00000476494 IBTKQ9P2D0 1353 aaPredicted RBP8.72□□□□□ -1.01
CLDN4-205ENST00000476494 PIEZO1Q92508 2521 aa8.72□□□□□ -1.01
CLDN4-205ENST00000476494 SSC5DA1L4H1 1573 aa8.71□□□□□ -1.02
CLDN4-205ENST00000476494 MANSC4A6NHS7 340 aaPredicted RBP8.71□□□□□ -1.02
CLDN4-205ENST00000476494 BBOX1O75936 387 aa8.71□□□□□ -1.02
CLDN4-205ENST00000476494 MYCP01106 439 aaPredicted RBP8.71□□□□□ -1.02
CLDN4-205ENST00000476494 BCAMP50895 628 aa8.71□□□□□ -1.02
CLDN4-205ENST00000476494 MTFR1Q15390 333 aa8.71□□□□□ -1.02
CLDN4-205ENST00000476494 SUSD4Q5VX71 490 aa8.71□□□□□ -1.02
CLDN4-205ENST00000476494 NPM2Q86SE8 214 aaKnown RBP8.71□□□□□ -1.02
CLDN4-205ENST00000476494 SH3TC2Q8TF17 1288 aa8.71□□□□□ -1.02
CLDN4-205ENST00000476494 SNX27Q96L92 541 aa8.71□□□□□ -1.02
CLDN4-205ENST00000476494 GMLQ99445 158 aa8.71□□□□□ -1.02
CLDN4-205ENST00000476494 PTPN18Q99952 460 aa8.71□□□□□ -1.02
CLDN4-205ENST00000476494 HTATIP2Q9BUP3 242 aa8.71□□□□□ -1.02
CLDN4-205ENST00000476494 DBNDD1Q9H9R9 158 aa8.71□□□□□ -1.02
CLDN4-205ENST00000476494 RPTORQ8N122 1335 aa8.71□□□□□ -1.02
CLDN4-205ENST00000476494 TESPA1A2RU30 521 aaPredicted RBP8.7□□□□□ -1.02
CLDN4-205ENST00000476494 NTSR2O95665 410 aa8.7□□□□□ -1.02
CLDN4-205ENST00000476494 GJA8P48165 433 aa8.7□□□□□ -1.02
CLDN4-205ENST00000476494 SLC10A5Q5PT55 438 aa8.7□□□□□ -1.02
CLDN4-205ENST00000476494 LRRC37AA6NMS7 1700 aa8.7□□□□□ -1.02
CLDN4-205ENST00000476494 ZSWIM8A7E2V4 1837 aa8.7□□□□□ -1.02
CLDN4-205ENST00000476494 LAMB2P55268 1798 aa8.69□□□□□ -1.02
CLDN4-205ENST00000476494 ANKRD36CQ5JPF3 1778 aa8.69□□□□□ -1.02
CLDN4-205ENST00000476494 ZNF34Q8IZ26 560 aa8.69□□□□□ -1.02
CLDN4-205ENST00000476494 NECTIN2Q92692 538 aa8.69□□□□□ -1.02
CLDN4-205ENST00000476494 CDH23Q9H251 3354 aa8.69□□□□□ -1.02
CLDN4-205ENST00000476494 PSME4Q14997 1843 aa8.68□□□□□ -1.02
CLDN4-205ENST00000476494 ERVV-1B6SEH8 477 aa8.68□□□□□ -1.02
CLDN4-205ENST00000476494 GJB1P08034 283 aa8.68□□□□□ -1.02
CLDN4-205ENST00000476494 ZBTB48P10074 688 aaPredicted RBP8.68□□□□□ -1.02
CLDN4-205ENST00000476494 GJA5P36382 358 aa8.68□□□□□ -1.02
CLDN4-205ENST00000476494 MAP3K11Q16584 847 aa8.68□□□□□ -1.02
CLDN4-205ENST00000476494 CDCA8Q53HL2 280 aa8.68□□□□□ -1.02
CLDN4-205ENST00000476494 DIEXFQ68CQ4 756 aaKnown RBP8.68□□□□□ -1.02
CLDN4-205ENST00000476494 FAM109BQ6ICB4 259 aaPredicted RBP8.68□□□□□ -1.02
CLDN4-205ENST00000476494 POLLQ9UGP5 575 aa8.68□□□□□ -1.02
CLDN4-205ENST00000476494 CEMIPQ8WUJ3 1361 aa8.68□□□□□ -1.02
CLDN4-205ENST00000476494 ECE2O60344 883 aa8.67□□□□□ -1.02
CLDN4-205ENST00000476494 TCIRG1Q13488 830 aa8.67□□□□□ -1.02
CLDN4-205ENST00000476494 WASHC4Q2M389 1173 aa8.67□□□□□ -1.02
CLDN4-205ENST00000476494 WNK4Q96J92 1243 aa8.67□□□□□ -1.02
CLDN4-205ENST00000476494 NLRP3Q96P20 1036 aa8.67□□□□□ -1.02
CLDN4-205ENST00000476494 DDX60Q8IY21 1712 aaKnown RBP8.66□□□□□ -1.02
CLDN4-205ENST00000476494 COL2A1P02458 1487 aaPredicted RBP8.66□□□□□ -1.02
CLDN4-205ENST00000476494 TNFRSF10AO00220 468 aa8.66□□□□□ -1.02
CLDN4-205ENST00000476494 MAP3K12Q12852 859 aa8.66□□□□□ -1.02
CLDN4-205ENST00000476494 TTLL12Q14166 644 aaPredicted RBP8.66□□□□□ -1.02
CLDN4-205ENST00000476494 DOK7Q18PE1 504 aa8.66□□□□□ -1.02
CLDN4-205ENST00000476494 NBPF9Q3BBW0 867 aa8.66□□□□□ -1.02
CLDN4-205ENST00000476494 AGBL3Q8NEM8 1001 aa8.66□□□□□ -1.02
CLDN4-205ENST00000476494 NKX2-3Q8TAU0 364 aa8.66□□□□□ -1.02
CLDN4-205ENST00000476494 CLMNQ96JQ2 1002 aa8.66□□□□□ -1.02
CLDN4-205ENST00000476494 ARHGAP39Q9C0H5 1083 aa8.66□□□□□ -1.02
CLDN4-205ENST00000476494 TMX4Q9H1E5 349 aaPredicted RBP8.66□□□□□ -1.02
CLDN4-205ENST00000476494 MYOZ2Q9NPC6 264 aa8.66□□□□□ -1.02
CLDN4-205ENST00000476494 FZD1Q9UP38 647 aa8.66□□□□□ -1.02
CLDN4-205ENST00000476494 MAP3K15Q6ZN16 1313 aa8.65□□□□□ -1.02
CLDN4-205ENST00000476494 EVI5O60447 810 aa8.65□□□□□ -1.02
CLDN4-205ENST00000476494 SNRPA1P09661 255 aaKnown RBP8.65□□□□□ -1.02
CLDN4-205ENST00000476494 GPTP24298 496 aa8.65□□□□□ -1.02
CLDN4-205ENST00000476494 ARMC9Q7Z3E5 817 aa8.65□□□□□ -1.02
CLDN4-205ENST00000476494 TDHQ8IZJ6 230 aa8.65□□□□□ -1.02
CLDN4-205ENST00000476494 SYMPKQ92797 1274 aaKnown RBP8.65□□□□□ -1.02
CLDN4-205ENST00000476494 MS4A4AQ96JQ5 239 aa8.65□□□□□ -1.02
CLDN4-205ENST00000476494 ARIH1Q9Y4X5 557 aaPredicted RBP8.65□□□□□ -1.02
CLDN4-205ENST00000476494 COL4A1P02462 1669 aa8.65□□□□□ -1.03
CLDN4-205ENST00000476494 RIMBP2O15034 1052 aa8.64□□□□□ -1.03
CLDN4-205ENST00000476494 HMOX1P09601 288 aa8.64□□□□□ -1.03
CLDN4-205ENST00000476494 CTGFP29279 349 aa8.64□□□□□ -1.03
CLDN4-205ENST00000476494 TEFQ10587 303 aa8.64□□□□□ -1.03
CLDN4-205ENST00000476494 GRAPQ13588 217 aa8.64□□□□□ -1.03
CLDN4-205ENST00000476494 RSBN1LQ6PCB5 846 aaPredicted RBP8.64□□□□□ -1.03
CLDN4-205ENST00000476494 TTLL7Q6ZT98 887 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms