RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 PIK3CDO00329 1044 aa6.03□□□□□ -1.44
VPS13D-206ENST00000476045 THBS1P07996 1170 aa6.03□□□□□ -1.44
VPS13D-206ENST00000476045 CENPCQ03188 943 aa6.03□□□□□ -1.44
VPS13D-206ENST00000476045 SEMA3FQ13275 785 aa6.03□□□□□ -1.44
VPS13D-206ENST00000476045 SLC27A3Q5K4L6 730 aa6.03□□□□□ -1.44
VPS13D-206ENST00000476045 VWA5B2Q8N398 1253 aa6.03□□□□□ -1.44
VPS13D-206ENST00000476045 PRAM1Q96QH2 718 aa6.03□□□□□ -1.44
VPS13D-206ENST00000476045 POGKQ9P215 609 aa6.03□□□□□ -1.44
VPS13D-206ENST00000476045 USP21Q9UK80 565 aa6.03□□□□□ -1.44
VPS13D-206ENST00000476045 USP54Q70EL1 1684 aa6.03□□□□□ -1.44
VPS13D-206ENST00000476045 ABCC6O95255 1503 aa6.03□□□□□ -1.44
VPS13D-206ENST00000476045 BRD4O60885 1362 aaPredicted RBP6.03□□□□□ -1.44
VPS13D-206ENST00000476045 AKAP12Q02952 1782 aa6.03□□□□□ -1.44
VPS13D-206ENST00000476045 FOXO3O43524 673 aa6.02□□□□□ -1.45
VPS13D-206ENST00000476045 ADAMTS2O95450 1211 aa6.02□□□□□ -1.45
VPS13D-206ENST00000476045 INHAP05111 366 aa6.02□□□□□ -1.45
VPS13D-206ENST00000476045 POU4F2Q12837 409 aa6.02□□□□□ -1.45
VPS13D-206ENST00000476045 UBAP2LQ14157 1087 aaKnown RBP6.02□□□□□ -1.45
VPS13D-206ENST00000476045 LBRQ14739 615 aaKnown RBP6.02□□□□□ -1.45
VPS13D-206ENST00000476045 MTFR1Q15390 333 aa6.02□□□□□ -1.45
VPS13D-206ENST00000476045 CFAP70Q5T0N1 1121 aa6.02□□□□□ -1.45
VPS13D-206ENST00000476045 TMEM132EQ6IEE7 984 aa6.02□□□□□ -1.45
VPS13D-206ENST00000476045 WAPLQ7Z5K2 1190 aa6.02□□□□□ -1.45
VPS13D-206ENST00000476045 PLEKHM2Q8IWE5 1019 aa6.02□□□□□ -1.45
VPS13D-206ENST00000476045 WWC1Q8IX03 1113 aa6.02□□□□□ -1.45
VPS13D-206ENST00000476045 DDX17Q92841 729 aaKnown RBP6.02□□□□□ -1.45
VPS13D-206ENST00000476045 CNTNAP3BQ96NU0 1288 aa6.02□□□□□ -1.45
VPS13D-206ENST00000476045 SLC4A9Q96Q91 983 aa6.02□□□□□ -1.45
VPS13D-206ENST00000476045 CNTNAP3Q9BZ76 1288 aa6.02□□□□□ -1.45
VPS13D-206ENST00000476045 QTRT2Q9H974 415 aaKnown RBP6.02□□□□□ -1.45
VPS13D-206ENST00000476045 PCDHGA11Q9Y5H2 935 aa6.02□□□□□ -1.45
VPS13D-206ENST00000476045 RGPD3A6NKT7 1758 aaPredicted RBP6.02□□□□□ -1.45
VPS13D-206ENST00000476045 RGPD4Q7Z3J3 1758 aa6.02□□□□□ -1.45
VPS13D-206ENST00000476045 LRP5O75197 1615 aa6.02□□□□□ -1.45
VPS13D-206ENST00000476045 TNS1Q9HBL0 1735 aaKnown RBP6.02□□□□□ -1.45
VPS13D-206ENST00000476045 LMO7Q8WWI1 1683 aa6.01□□□□□ -1.45
VPS13D-206ENST00000476045 BLMP54132 1417 aaPredicted RBP6.01□□□□□ -1.45
VPS13D-206ENST00000476045 A0A1B0GTH6 734 aa6.01□□□□□ -1.45
VPS13D-206ENST00000476045 CDC14CA4D256 554 aa6.01□□□□□ -1.45
VPS13D-206ENST00000476045 TMEM229AB2RXF0 380 aa6.01□□□□□ -1.45
VPS13D-206ENST00000476045 H7C1W4 665 aa6.01□□□□□ -1.45
VPS13D-206ENST00000476045 SRSF11Q05519 484 aaKnown RBP6.01□□□□□ -1.45
VPS13D-206ENST00000476045 DBN1Q16643 649 aa6.01□□□□□ -1.45
VPS13D-206ENST00000476045 OXLD1Q5BKU9 147 aa6.01□□□□□ -1.45
VPS13D-206ENST00000476045 ZNF385CQ66K41 422 aaPredicted RBP6.01□□□□□ -1.45
VPS13D-206ENST00000476045 UNC5CLQ8IV45 518 aa6.01□□□□□ -1.45
VPS13D-206ENST00000476045 RHBDD1Q8TEB9 315 aa6.01□□□□□ -1.45
VPS13D-206ENST00000476045 UCN2Q96RP3 112 aa6.01□□□□□ -1.45
VPS13D-206ENST00000476045 ZSCAN10Q96SZ4 725 aaPredicted RBP6.01□□□□□ -1.45
VPS13D-206ENST00000476045 MON2Q7Z3U7 1717 aa6.01□□□□□ -1.45
VPS13D-206ENST00000476045 PARP4Q9UKK3 1724 aaKnown RBP6.01□□□□□ -1.45
VPS13D-206ENST00000476045 POLR3AO14802 1390 aaPredicted RBP6.01□□□□□ -1.45
VPS13D-206ENST00000476045 POM121CA8CG34 1229 aa6□□□□□ -1.45
VPS13D-206ENST00000476045 RAD21O60216 631 aa6□□□□□ -1.45
VPS13D-206ENST00000476045 ARHGEF15O94989 841 aa6□□□□□ -1.45
VPS13D-206ENST00000476045 F11P03951 625 aa6□□□□□ -1.45
VPS13D-206ENST00000476045 GDF10P55107 478 aa6□□□□□ -1.45
VPS13D-206ENST00000476045 C4orf17Q53FE4 359 aa6□□□□□ -1.45
VPS13D-206ENST00000476045 KRT28Q7Z3Y7 464 aa6□□□□□ -1.45
VPS13D-206ENST00000476045 DCAF11Q8TEB1 546 aa6□□□□□ -1.45
VPS13D-206ENST00000476045 TIMMDC1Q9NPL8 285 aa6□□□□□ -1.45
VPS13D-206ENST00000476045 IQSEC3Q9UPP2 1182 aaPredicted RBP6□□□□□ -1.45
VPS13D-206ENST00000476045 PIK3C2AO00443 1686 aa5.99□□□□□ -1.45
VPS13D-206ENST00000476045 SBNO2Q9Y2G9 1366 aa5.99□□□□□ -1.45
VPS13D-206ENST00000476045 USP17L5A8MUK1 530 aa5.99□□□□□ -1.45
VPS13D-206ENST00000476045 STAU1O95793 577 aaKnown RBP5.99□□□□□ -1.45
VPS13D-206ENST00000476045 TLR1Q15399 786 aa5.99□□□□□ -1.45
VPS13D-206ENST00000476045 VPS72Q15906 364 aa5.99□□□□□ -1.45
VPS13D-206ENST00000476045 DIEXFQ68CQ4 756 aaKnown RBP5.99□□□□□ -1.45
VPS13D-206ENST00000476045 CRISPLD1Q9H336 500 aa5.99□□□□□ -1.45
VPS13D-206ENST00000476045 MBIPQ9NS73 344 aa5.99□□□□□ -1.45
VPS13D-206ENST00000476045 SLIT3O75094 1523 aa5.99□□□□□ -1.45
VPS13D-206ENST00000476045 DISP2A7MBM2 1401 aa5.99□□□□□ -1.45
VPS13D-206ENST00000476045 RREB1Q92766 1687 aa5.98□□□□□ -1.45
VPS13D-206ENST00000476045 FAM208AQ9UK61 1670 aaKnown RBP5.98□□□□□ -1.45
VPS13D-206ENST00000476045 CPDO75976 1380 aa5.98□□□□□ -1.45
VPS13D-206ENST00000476045 A6NJR5 290 aa5.98□□□□□ -1.45
VPS13D-206ENST00000476045 GSK3AP49840 483 aa5.98□□□□□ -1.45
VPS13D-206ENST00000476045 SMTNP53814 917 aa5.98□□□□□ -1.45
VPS13D-206ENST00000476045 EPHA4P54764 986 aa5.98□□□□□ -1.45
VPS13D-206ENST00000476045 XPCQ01831 940 aaPredicted RBP5.98□□□□□ -1.45
VPS13D-206ENST00000476045 EML3Q32P44 896 aa5.98□□□□□ -1.45
VPS13D-206ENST00000476045 GNASQ5JWF2 1037 aa5.98□□□□□ -1.45
VPS13D-206ENST00000476045 TRAK1Q9UPV9 953 aa5.98□□□□□ -1.45
VPS13D-206ENST00000476045 PRR36Q9H6K5 1346 aa5.98□□□□□ -1.45
VPS13D-206ENST00000476045 CENPJQ9HC77 1338 aaPredicted RBP5.98□□□□□ -1.45
VPS13D-206ENST00000476045 ATP4AP20648 1035 aa5.97□□□□□ -1.45
VPS13D-206ENST00000476045 NCOA4Q13772 614 aa5.97□□□□□ -1.45
VPS13D-206ENST00000476045 SAFB2Q14151 953 aaKnown RBP eCLIP5.97□□□□□ -1.45
VPS13D-206ENST00000476045 NGDNQ8NEJ9 315 aaKnown RBP5.97□□□□□ -1.45
VPS13D-206ENST00000476045 C1orf216Q8TAB5 229 aa5.97□□□□□ -1.45
VPS13D-206ENST00000476045 NUCKS1Q9H1E3 243 aaKnown RBP5.97□□□□□ -1.45
VPS13D-206ENST00000476045 LRRC4BQ9NT99 713 aa5.97□□□□□ -1.45
VPS13D-206ENST00000476045 NDFIP2Q9NV92 336 aa5.97□□□□□ -1.45
VPS13D-206ENST00000476045 NOD1Q9Y239 953 aa5.97□□□□□ -1.45
VPS13D-206ENST00000476045 PPIP5K1Q6PFW1 1433 aa5.97□□□□□ -1.45
VPS13D-206ENST00000476045 USP19O94966 1318 aa5.97□□□□□ -1.45
VPS13D-206ENST00000476045 LRRC37A3O60309 1634 aa5.96□□□□□ -1.45
VPS13D-206ENST00000476045 PARD3Q8TEW0 1356 aa5.96□□□□□ -1.45
VPS13D-206ENST00000476045 CDK2AP1O14519 115 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms