RNA–Protein interactions for RNA: ENST00000475916.1

SLF1-204, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 2

Gene SLF1, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-204ENST00000475916 SRA1Q9HD15 236 aaKnown RBP9.02□□□□□ -0.97
SLF1-204ENST00000475916 CUEDC1Q9NWM3 386 aaPredicted RBP9.02□□□□□ -0.97
SLF1-204ENST00000475916 KANSL3Q9P2N6 904 aa9.02□□□□□ -0.97
SLF1-204ENST00000475916 AKAP2Q9Y2D5 859 aa9.02□□□□□ -0.97
SLF1-204ENST00000475916 A0A1W2PP55 124 aa9.01□□□□□ -0.97
SLF1-204ENST00000475916 DGAT1O75907 488 aa9.01□□□□□ -0.97
SLF1-204ENST00000475916 TARSP26639 723 aaKnown RBP9.01□□□□□ -0.97
SLF1-204ENST00000475916 SMCPP49901 116 aaPredicted RBP9.01□□□□□ -0.97
SLF1-204ENST00000475916 FAM177A1Q8N128 213 aaPredicted RBP9.01□□□□□ -0.97
SLF1-204ENST00000475916 DNAJC2Q99543 621 aaKnown RBP9.01□□□□□ -0.97
SLF1-204ENST00000475916 GSX2Q9BZM3 304 aa9.01□□□□□ -0.97
SLF1-204ENST00000475916 NUCKS1Q9H1E3 243 aaKnown RBP9.01□□□□□ -0.97
SLF1-204ENST00000475916 LIN7BQ9HAP6 207 aa9.01□□□□□ -0.97
SLF1-204ENST00000475916 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.01□□□□□ -0.97
SLF1-204ENST00000475916 MMP20O60882 483 aa9□□□□□ -0.97
SLF1-204ENST00000475916 STK10O94804 968 aaKnown RBP9□□□□□ -0.97
SLF1-204ENST00000475916 GRNP28799 593 aaKnown RBP9□□□□□ -0.97
SLF1-204ENST00000475916 VEGFBP49765 207 aa9□□□□□ -0.97
SLF1-204ENST00000475916 PLAURQ03405 335 aa9□□□□□ -0.97
SLF1-204ENST00000475916 SFSWAPQ12872 951 aaKnown RBP9□□□□□ -0.97
SLF1-204ENST00000475916 DIEXFQ68CQ4 756 aaKnown RBP9□□□□□ -0.97
SLF1-204ENST00000475916 DPH6Q7L8W6 267 aa9□□□□□ -0.97
SLF1-204ENST00000475916 DHX38Q92620 1227 aaKnown RBP9□□□□□ -0.97
SLF1-204ENST00000475916 BUD13Q9BRD0 619 aaKnown RBP eCLIP9□□□□□ -0.97
SLF1-204ENST00000475916 RSRP1Q9BUV0 290 aa9□□□□□ -0.97
SLF1-204ENST00000475916 OXCT2Q9BYC2 517 aaPredicted RBP9□□□□□ -0.97
SLF1-204ENST00000475916 MARK1Q9P0L2 795 aa9□□□□□ -0.97
SLF1-204ENST00000475916 DNMT3LQ9UJW3 386 aa9□□□□□ -0.97
SLF1-204ENST00000475916 DCDC2BA2VCK2 349 aa8.99□□□□□ -0.97
SLF1-204ENST00000475916 HSP90B1P14625 803 aaKnown RBP8.99□□□□□ -0.97
SLF1-204ENST00000475916 PRPF40BQ6NWY9 871 aaKnown RBP8.99□□□□□ -0.97
SLF1-204ENST00000475916 ERMP1Q7Z2K6 904 aa8.99□□□□□ -0.97
SLF1-204ENST00000475916 TRIM46Q7Z4K8 759 aa8.99□□□□□ -0.97
SLF1-204ENST00000475916 GPRASP2Q96D09 838 aa8.99□□□□□ -0.97
SLF1-204ENST00000475916 SPON2Q9BUD6 331 aa8.99□□□□□ -0.97
SLF1-204ENST00000475916 CEP44Q9C0F1 390 aa8.99□□□□□ -0.97
SLF1-204ENST00000475916 TMEM238LA0A1B0GVL6 79 aa8.98□□□□□ -0.97
SLF1-204ENST00000475916 POTECB2RU33 542 aa8.98□□□□□ -0.97
SLF1-204ENST00000475916 SMARCA5O60264 1052 aaPredicted RBP8.98□□□□□ -0.97
SLF1-204ENST00000475916 CYP2E1P05181 493 aaPredicted RBP8.98□□□□□ -0.97
SLF1-204ENST00000475916 NFKB1P19838 968 aa8.98□□□□□ -0.97
SLF1-204ENST00000475916 GBP2P32456 591 aaPredicted RBP8.98□□□□□ -0.97
SLF1-204ENST00000475916 SOX18P35713 384 aa8.98□□□□□ -0.97
SLF1-204ENST00000475916 PAK2Q13177 524 aa8.98□□□□□ -0.97
SLF1-204ENST00000475916 NOP9Q86U38 636 aaKnown RBP8.98□□□□□ -0.97
SLF1-204ENST00000475916 KIAA0825Q8IV33 1275 aa8.98□□□□□ -0.97
SLF1-204ENST00000475916 GMCL1Q96IK5 515 aa8.98□□□□□ -0.97
SLF1-204ENST00000475916 KBTBD4Q9NVX7 518 aa8.98□□□□□ -0.97
SLF1-204ENST00000475916 TLR7Q9NYK1 1049 aaKnown RBP8.98□□□□□ -0.97
SLF1-204ENST00000475916 SALL4Q9UJQ4 1053 aa8.98□□□□□ -0.97
SLF1-204ENST00000475916 PHF24Q9UPV7 400 aa8.98□□□□□ -0.97
SLF1-204ENST00000475916 EFSO43281 561 aa8.97□□□□□ -0.97
SLF1-204ENST00000475916 MAP3K6O95382 1288 aa8.97□□□□□ -0.97
SLF1-204ENST00000475916 MAPTP10636 758 aaKnown RBP8.97□□□□□ -0.97
SLF1-204ENST00000475916 GJA8P48165 433 aa8.97□□□□□ -0.97
SLF1-204ENST00000475916 SPEM2Q0P670 501 aa8.97□□□□□ -0.97
SLF1-204ENST00000475916 PCSK7Q16549 785 aa8.97□□□□□ -0.97
SLF1-204ENST00000475916 FOXR1Q6PIV2 292 aa8.97□□□□□ -0.97
SLF1-204ENST00000475916 SV2BQ7L1I2 683 aa8.97□□□□□ -0.97
SLF1-204ENST00000475916 PUS7Q96PZ0 661 aaKnown RBP8.97□□□□□ -0.97
SLF1-204ENST00000475916 OSMRQ99650 979 aa8.97□□□□□ -0.97
SLF1-204ENST00000475916 RBSNQ9H1K0 784 aa8.97□□□□□ -0.97
SLF1-204ENST00000475916 LMNB1P20700 586 aa8.96□□□□□ -0.98
SLF1-204ENST00000475916 TNP2Q05952 138 aa8.96□□□□□ -0.98
SLF1-204ENST00000475916 PMFBP1Q8TBY8 1022 aa8.96□□□□□ -0.98
SLF1-204ENST00000475916 BHMTQ93088 406 aa8.96□□□□□ -0.98
SLF1-204ENST00000475916 LATS2Q9NRM7 1088 aa8.96□□□□□ -0.98
SLF1-204ENST00000475916 MINDY4BA8MYZ0 360 aa8.95□□□□□ -0.98
SLF1-204ENST00000475916 SSBP05455 408 aaKnown RBP eCLIP8.95□□□□□ -0.98
SLF1-204ENST00000475916 PEAR1Q5VY43 1037 aaPredicted RBP8.95□□□□□ -0.98
SLF1-204ENST00000475916 GLIS3Q8NEA6 775 aa8.95□□□□□ -0.98
SLF1-204ENST00000475916 ANKRD24Q8TF21 1146 aa8.95□□□□□ -0.98
SLF1-204ENST00000475916 SEC16BQ96JE7 1060 aa8.95□□□□□ -0.98
SLF1-204ENST00000475916 COPRSQ9NQ92 184 aa8.95□□□□□ -0.98
SLF1-204ENST00000475916 ATF4P18848 351 aaPredicted RBP8.94□□□□□ -0.98
SLF1-204ENST00000475916 PTSQ03393 145 aa8.94□□□□□ -0.98
SLF1-204ENST00000475916 DHX32Q7L7V1 743 aaKnown RBP8.94□□□□□ -0.98
SLF1-204ENST00000475916 TRIM22Q8IYM9 498 aa8.94□□□□□ -0.98
SLF1-204ENST00000475916 C3orf58Q8NDZ4 430 aa8.94□□□□□ -0.98
SLF1-204ENST00000475916 TMEM74Q96NL1 305 aa8.94□□□□□ -0.98
SLF1-204ENST00000475916 LNPKQ9C0E8 428 aa8.94□□□□□ -0.98
SLF1-204ENST00000475916 ATXN7L1Q9ULK2 861 aaPredicted RBP8.94□□□□□ -0.98
SLF1-204ENST00000475916 SENP3-EIF4A1A0A087X0R7 540 aa8.93□□□□□ -0.98
SLF1-204ENST00000475916 KIF4AO95239 1232 aa8.93□□□□□ -0.98
SLF1-204ENST00000475916 EIF4A3P38919 411 aaKnown RBP8.93□□□□□ -0.98
SLF1-204ENST00000475916 TPTE2Q6XPS3 522 aa8.93□□□□□ -0.98
SLF1-204ENST00000475916 CCNJLQ8IV13 435 aa8.93□□□□□ -0.98
SLF1-204ENST00000475916 CKAP2LQ8IYA6 745 aa8.93□□□□□ -0.98
SLF1-204ENST00000475916 CRIPAKQ8N1N5 446 aa8.93□□□□□ -0.98
SLF1-204ENST00000475916 TRERF1Q96PN7 1200 aa8.93□□□□□ -0.98
SLF1-204ENST00000475916 ZKSCAN3Q9BRR0 538 aa8.93□□□□□ -0.98
SLF1-204ENST00000475916 ABCB6Q9NP58 842 aa8.93□□□□□ -0.98
SLF1-204ENST00000475916 ZFATQ9P243 1243 aa8.93□□□□□ -0.98
SLF1-204ENST00000475916 PRR12Q9ULL5 1215 aa8.93□□□□□ -0.98
SLF1-204ENST00000475916 TMA7Q9Y2S6 64 aaKnown RBP8.93□□□□□ -0.98
SLF1-204ENST00000475916 SAMM50Q9Y512 469 aa8.93□□□□□ -0.98
SLF1-204ENST00000475916 FAM177BA6PVY3 158 aa8.92□□□□□ -0.98
SLF1-204ENST00000475916 GHRHP01286 108 aa8.92□□□□□ -0.98
SLF1-204ENST00000475916 NCLP19338 710 aaKnown RBP8.92□□□□□ -0.98
SLF1-204ENST00000475916 NRLP54845 237 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 896 ms