RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-208ENST00000475912 PDGFAP04085 211 aa9.09□□□□□ -0.95
PRKD3-208ENST00000475912 HOXD8P13378 290 aaPredicted RBP9.09□□□□□ -0.95
PRKD3-208ENST00000475912 TTC39BQ5VTQ0 682 aaPredicted RBP9.09□□□□□ -0.95
PRKD3-208ENST00000475912 B4GALNT3Q6L9W6 998 aa9.09□□□□□ -0.95
PRKD3-208ENST00000475912 DMRTC2Q8IXT2 367 aaPredicted RBP9.09□□□□□ -0.95
PRKD3-208ENST00000475912 A0A0A0MRY4 1105 aa9.08□□□□□ -0.96
PRKD3-208ENST00000475912 GHRHP01286 108 aa9.08□□□□□ -0.96
PRKD3-208ENST00000475912 NPR3P17342 541 aa9.08□□□□□ -0.96
PRKD3-208ENST00000475912 COL13A1Q5TAT6 717 aaPredicted RBP9.08□□□□□ -0.96
PRKD3-208ENST00000475912 ZNF438Q7Z4V0 828 aa9.08□□□□□ -0.96
PRKD3-208ENST00000475912 PLD4Q96BZ4 506 aa9.08□□□□□ -0.96
PRKD3-208ENST00000475912 GGNBP2Q9H3C7 697 aa9.08□□□□□ -0.96
PRKD3-208ENST00000475912 ABI2Q9NYB9 513 aaPredicted RBP9.08□□□□□ -0.96
PRKD3-208ENST00000475912 TMEM63CQ9P1W3 806 aa9.08□□□□□ -0.96
PRKD3-208ENST00000475912 A6NHS1 94 aa9.07□□□□□ -0.96
PRKD3-208ENST00000475912 FAM13AO94988 1023 aa9.07□□□□□ -0.96
PRKD3-208ENST00000475912 CYP2E1P05181 493 aaPredicted RBP9.07□□□□□ -0.96
PRKD3-208ENST00000475912 PCSK2P16519 638 aa9.07□□□□□ -0.96
PRKD3-208ENST00000475912 MZF1P28698 734 aaPredicted RBP9.07□□□□□ -0.96
PRKD3-208ENST00000475912 FKBP4Q02790 459 aaKnown RBP eCLIP9.07□□□□□ -0.96
PRKD3-208ENST00000475912 SF3B2Q13435 895 aaKnown RBP9.07□□□□□ -0.96
PRKD3-208ENST00000475912 AAMPQ13685 434 aa9.07□□□□□ -0.96
PRKD3-208ENST00000475912 GRIK4Q16099 956 aa9.07□□□□□ -0.96
PRKD3-208ENST00000475912 MSL1Q68DK7 614 aa9.07□□□□□ -0.96
PRKD3-208ENST00000475912 PDE12Q6L8Q7 609 aaKnown RBP9.07□□□□□ -0.96
PRKD3-208ENST00000475912 ALKBH2Q6NS38 261 aa9.07□□□□□ -0.96
PRKD3-208ENST00000475912 TTC9Q92623 222 aa9.07□□□□□ -0.96
PRKD3-208ENST00000475912 ELP3Q9H9T3 547 aa9.07□□□□□ -0.96
PRKD3-208ENST00000475912 POLIQ9UNA4 740 aa9.07□□□□□ -0.96
PRKD3-208ENST00000475912 APBA3O96018 575 aa9.06□□□□□ -0.96
PRKD3-208ENST00000475912 RPLP1P05386 114 aaKnown RBP9.06□□□□□ -0.96
PRKD3-208ENST00000475912 SERPINB4P48594 390 aa9.06□□□□□ -0.96
PRKD3-208ENST00000475912 C8orf34Q49A92 452 aa9.06□□□□□ -0.96
PRKD3-208ENST00000475912 RBSNQ9H1K0 784 aa9.06□□□□□ -0.96
PRKD3-208ENST00000475912 CECR2Q9BXF3 1484 aa9.05□□□□□ -0.96
PRKD3-208ENST00000475912 RAC1P63000 192 aa9.05□□□□□ -0.96
PRKD3-208ENST00000475912 HYAL2Q12891 473 aa9.05□□□□□ -0.96
PRKD3-208ENST00000475912 GDF6Q6KF10 455 aaPredicted RBP9.05□□□□□ -0.96
PRKD3-208ENST00000475912 ILDR2Q71H61 639 aa9.05□□□□□ -0.96
PRKD3-208ENST00000475912 WFDC8Q8IUA0 241 aa9.05□□□□□ -0.96
PRKD3-208ENST00000475912 CNTN3Q9P232 1028 aa9.05□□□□□ -0.96
PRKD3-208ENST00000475912 XP32Q5T750 250 aa9.04□□□□□ -0.96
PRKD3-208ENST00000475912 TTC16Q8NEE8 873 aa9.04□□□□□ -0.96
PRKD3-208ENST00000475912 KANSL3Q9P2N6 904 aa9.04□□□□□ -0.96
PRKD3-208ENST00000475912 H3BRB1 525 aa9.03□□□□□ -0.96
PRKD3-208ENST00000475912 FZD6O60353 706 aa9.03□□□□□ -0.96
PRKD3-208ENST00000475912 ELNP15502 786 aa9.03□□□□□ -0.96
PRKD3-208ENST00000475912 ATP11AP98196 1134 aa9.03□□□□□ -0.96
PRKD3-208ENST00000475912 XKR5Q6UX68 686 aa9.03□□□□□ -0.96
PRKD3-208ENST00000475912 FMR1NBQ8N0W7 255 aaPredicted RBP9.03□□□□□ -0.96
PRKD3-208ENST00000475912 TUT1Q9H6E5 874 aaKnown RBP9.03□□□□□ -0.96
PRKD3-208ENST00000475912 EGFL7Q9UHF1 273 aa9.03□□□□□ -0.96
PRKD3-208ENST00000475912 TRIM33Q9UPN9 1127 aa9.03□□□□□ -0.96
PRKD3-208ENST00000475912 ICMTO60725 284 aa9.02□□□□□ -0.97
PRKD3-208ENST00000475912 KIF4AO95239 1232 aa9.02□□□□□ -0.97
PRKD3-208ENST00000475912 BAG6P46379 1132 aa9.02□□□□□ -0.97
PRKD3-208ENST00000475912 C1orf127Q8N9H9 656 aa9.02□□□□□ -0.97
PRKD3-208ENST00000475912 SPACA7Q96KW9 195 aa9.02□□□□□ -0.97
PRKD3-208ENST00000475912 NACC1Q96RE7 527 aa9.02□□□□□ -0.97
PRKD3-208ENST00000475912 CCDC87Q9NVE4 849 aa9.02□□□□□ -0.97
PRKD3-208ENST00000475912 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.02□□□□□ -0.97
PRKD3-208ENST00000475912 CC2D2AQ9P2K1 1620 aa9.02□□□□□ -0.97
PRKD3-208ENST00000475912 PDE4CQ08493 712 aa9.01□□□□□ -0.97
PRKD3-208ENST00000475912 SHISA2Q6UWI4 295 aa9.01□□□□□ -0.97
PRKD3-208ENST00000475912 NCAPG2Q86XI2 1143 aa9.01□□□□□ -0.97
PRKD3-208ENST00000475912 IL22RA1Q8N6P7 574 aa9.01□□□□□ -0.97
PRKD3-208ENST00000475912 RASSF4Q9H2L5 321 aa9.01□□□□□ -0.97
PRKD3-208ENST00000475912 SELPP16109 830 aa9□□□□□ -0.97
PRKD3-208ENST00000475912 TXNDC2Q86VQ3 553 aa9□□□□□ -0.97
PRKD3-208ENST00000475912 GLYCTKQ8IVS8 523 aa9□□□□□ -0.97
PRKD3-208ENST00000475912 DTWD1Q8N5C7 304 aa9□□□□□ -0.97
PRKD3-208ENST00000475912 CHRDQ9H2X0 955 aa9□□□□□ -0.97
PRKD3-208ENST00000475912 CES1P23141 567 aa8.99□□□□□ -0.97
PRKD3-208ENST00000475912 GATA4P43694 442 aa8.99□□□□□ -0.97
PRKD3-208ENST00000475912 CEP135Q66GS9 1140 aa8.99□□□□□ -0.97
PRKD3-208ENST00000475912 FBXO11Q86XK2 927 aa8.99□□□□□ -0.97
PRKD3-208ENST00000475912 C9orf172C9J069 976 aa8.98□□□□□ -0.97
PRKD3-208ENST00000475912 DEAF1O75398 565 aaPredicted RBP8.98□□□□□ -0.97
PRKD3-208ENST00000475912 ACPPP15309 386 aa8.98□□□□□ -0.97
PRKD3-208ENST00000475912 USP5P45974 858 aa8.98□□□□□ -0.97
PRKD3-208ENST00000475912 ECM1Q16610 540 aa8.98□□□□□ -0.97
PRKD3-208ENST00000475912 CEP120Q8N960 986 aa8.98□□□□□ -0.97
PRKD3-208ENST00000475912 LACRTQ9GZZ8 138 aa8.98□□□□□ -0.97
PRKD3-208ENST00000475912 SALL4Q9UJQ4 1053 aa8.98□□□□□ -0.97
PRKD3-208ENST00000475912 FOXD3Q9UJU5 478 aaPredicted RBP8.98□□□□□ -0.97
PRKD3-208ENST00000475912 TNFRSF21O75509 655 aa8.97□□□□□ -0.97
PRKD3-208ENST00000475912 SMNDC1O75940 238 aaKnown RBP eCLIP8.97□□□□□ -0.97
PRKD3-208ENST00000475912 FURINP09958 794 aa8.97□□□□□ -0.97
PRKD3-208ENST00000475912 DOC2BQ14184 412 aa8.97□□□□□ -0.97
PRKD3-208ENST00000475912 ADAMTSL4Q6UY14 1074 aa8.97□□□□□ -0.97
PRKD3-208ENST00000475912 GJD3Q8N144 294 aa8.97□□□□□ -0.97
PRKD3-208ENST00000475912 PBX4Q9BYU1 374 aa8.97□□□□□ -0.97
PRKD3-208ENST00000475912 EREGO14944 169 aa8.96□□□□□ -0.98
PRKD3-208ENST00000475912 ADAM23O75077 832 aa8.96□□□□□ -0.98
PRKD3-208ENST00000475912 EHHADHQ08426 723 aa8.96□□□□□ -0.98
PRKD3-208ENST00000475912 ADGRE1Q14246 886 aa8.96□□□□□ -0.98
PRKD3-208ENST00000475912 SNX29Q8TEQ0 813 aa8.96□□□□□ -0.98
PRKD3-208ENST00000475912 LENG1Q96BZ8 264 aaPredicted RBP8.96□□□□□ -0.98
PRKD3-208ENST00000475912 USP21Q9UK80 565 aa8.96□□□□□ -0.98
PRKD3-208ENST00000475912 PHACTR2O75167 634 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms