RNA–Protein interactions for RNA: ENST00000475875.1

CSNK2B-207, Transcript of casein kinase 2 beta, humanhuman

TSL 1 (best)

Gene CSNK2B, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2B-207ENST00000475875 C6orf229H3BNL8 230 aa19.2■□□□□ 0.66
CSNK2B-207ENST00000475875 POLLQ9UGP5 575 aa19.2■□□□□ 0.66
CSNK2B-207ENST00000475875 SH3TC1Q8TE82 1336 aa19.2■□□□□ 0.66
CSNK2B-207ENST00000475875 CLSPNQ9HAW4 1339 aa19.2■□□□□ 0.66
CSNK2B-207ENST00000475875 KDM3BQ7LBC6 1761 aa19.19■□□□□ 0.66
CSNK2B-207ENST00000475875 UBE2Q2LH0YL09 131 aa19.19■□□□□ 0.66
CSNK2B-207ENST00000475875 RIMBP2O15034 1052 aa19.19■□□□□ 0.66
CSNK2B-207ENST00000475875 LRP10Q7Z4F1 713 aa19.19■□□□□ 0.66
CSNK2B-207ENST00000475875 NLRP10Q86W26 655 aa19.19■□□□□ 0.66
CSNK2B-207ENST00000475875 KCNQ5Q9NR82 932 aa19.19■□□□□ 0.66
CSNK2B-207ENST00000475875 COLQQ9Y215 455 aaPredicted RBP19.19■□□□□ 0.66
CSNK2B-207ENST00000475875 TRIM17Q9Y577 477 aa19.19■□□□□ 0.66
CSNK2B-207ENST00000475875 DOK7Q18PE1 504 aa19.18■□□□□ 0.66
CSNK2B-207ENST00000475875 OTOP1Q7RTM1 612 aa19.18■□□□□ 0.66
CSNK2B-207ENST00000475875 ARMC5Q96C12 935 aa19.18■□□□□ 0.66
CSNK2B-207ENST00000475875 TRIOBPQ9H2D6 2365 aa19.18■□□□□ 0.66
CSNK2B-207ENST00000475875 DLL1O00548 723 aa19.17■□□□□ 0.66
CSNK2B-207ENST00000475875 U2AF1L5P0DN76 240 aaPredicted RBP19.17■□□□□ 0.66
CSNK2B-207ENST00000475875 U2AF1Q01081 240 aaKnown RBP eCLIP19.17■□□□□ 0.66
CSNK2B-207ENST00000475875 RSBN1LQ6PCB5 846 aaPredicted RBP19.17■□□□□ 0.66
CSNK2B-207ENST00000475875 MOB2Q70IA6 237 aa19.17■□□□□ 0.66
CSNK2B-207ENST00000475875 ZC3H12CQ9C0D7 883 aaKnown RBP19.17■□□□□ 0.66
CSNK2B-207ENST00000475875 TRMT112Q9UI30 125 aaKnown RBP19.17■□□□□ 0.66
CSNK2B-207ENST00000475875 NF2P35240 595 aa19.16■□□□□ 0.66
CSNK2B-207ENST00000475875 INHBEP58166 350 aa19.16■□□□□ 0.66
CSNK2B-207ENST00000475875 TBC1D16Q8TBP0 767 aa19.16■□□□□ 0.66
CSNK2B-207ENST00000475875 R3HDMLQ9H3Y0 253 aa19.16■□□□□ 0.66
CSNK2B-207ENST00000475875 A0A0C4DFX4 3053 aa19.15■□□□□ 0.66
CSNK2B-207ENST00000475875 GPSM2P81274 684 aa19.15■□□□□ 0.66
CSNK2B-207ENST00000475875 TCIRG1Q13488 830 aa19.15■□□□□ 0.66
CSNK2B-207ENST00000475875 SF3B3Q15393 1217 aaKnown RBP19.15■□□□□ 0.66
CSNK2B-207ENST00000475875 MYOZ2Q9NPC6 264 aa19.15■□□□□ 0.66
CSNK2B-207ENST00000475875 CEP290O15078 2479 aa19.15■□□□□ 0.66
CSNK2B-207ENST00000475875 USP17L8P0C7I0 530 aa19.14■□□□□ 0.65
CSNK2B-207ENST00000475875 TTLL12Q14166 644 aaPredicted RBP19.14■□□□□ 0.65
CSNK2B-207ENST00000475875 PDIA6Q15084 440 aa19.14■□□□□ 0.65
CSNK2B-207ENST00000475875 CELF1Q92879 486 aaKnown RBP19.14■□□□□ 0.65
CSNK2B-207ENST00000475875 PODXL2Q9NZ53 605 aa19.14■□□□□ 0.65
CSNK2B-207ENST00000475875 PTPN22Q9Y2R2 807 aa19.14■□□□□ 0.65
CSNK2B-207ENST00000475875 EN2P19622 333 aaPredicted RBP19.13■□□□□ 0.65
CSNK2B-207ENST00000475875 ERO1AQ96HE7 468 aa19.13■□□□□ 0.65
CSNK2B-207ENST00000475875 GMLQ99445 158 aa19.13■□□□□ 0.65
CSNK2B-207ENST00000475875 SCN9AQ15858 1988 aa19.13■□□□□ 0.65
CSNK2B-207ENST00000475875 CUL9Q8IWT3 2517 aa19.12■□□□□ 0.65
CSNK2B-207ENST00000475875 G3V3G9 751 aa19.12■□□□□ 0.65
CSNK2B-207ENST00000475875 DCAF8Q5TAQ9 597 aa19.12■□□□□ 0.65
CSNK2B-207ENST00000475875 ARMC9Q7Z3E5 817 aa19.12■□□□□ 0.65
CSNK2B-207ENST00000475875 TMEM106CQ9BVX2 250 aa19.12■□□□□ 0.65
CSNK2B-207ENST00000475875 MANSC4A6NHS7 340 aaPredicted RBP19.11■□□□□ 0.65
CSNK2B-207ENST00000475875 MKRN3Q13064 507 aaKnown RBP19.11■□□□□ 0.65
CSNK2B-207ENST00000475875 SPRYD7Q5W111 196 aa19.11■□□□□ 0.65
CSNK2B-207ENST00000475875 OTUD5Q96G74 571 aa19.11■□□□□ 0.65
CSNK2B-207ENST00000475875 THUMPD2Q9BTF0 503 aaKnown RBP19.11■□□□□ 0.65
CSNK2B-207ENST00000475875 TAF1P21675 1872 aa19.11■□□□□ 0.65
CSNK2B-207ENST00000475875 RANBP2P49792 3224 aaKnown RBP19.1■□□□□ 0.65
CSNK2B-207ENST00000475875 SLC17A8Q8NDX2 589 aa19.1■□□□□ 0.65
CSNK2B-207ENST00000475875 PTPN12Q05209 780 aaKnown RBP19.09■□□□□ 0.65
CSNK2B-207ENST00000475875 LDLRAD1Q5T700 205 aa19.09■□□□□ 0.65
CSNK2B-207ENST00000475875 IFNL1Q8IU54 200 aa19.09■□□□□ 0.65
CSNK2B-207ENST00000475875 NEFMP07197 916 aa19.08■□□□□ 0.64
CSNK2B-207ENST00000475875 MMP14P50281 582 aa19.08■□□□□ 0.64
CSNK2B-207ENST00000475875 RPS8P62241 208 aaKnown RBP19.08■□□□□ 0.64
CSNK2B-207ENST00000475875 COPS6Q7L5N1 327 aa19.08■□□□□ 0.64
CSNK2B-207ENST00000475875 USP17L3A6NCW0 530 aa19.07■□□□□ 0.64
CSNK2B-207ENST00000475875 USP17L4A6NCW7 530 aa19.07■□□□□ 0.64
CSNK2B-207ENST00000475875 UFL1O94874 794 aa19.07■□□□□ 0.64
CSNK2B-207ENST00000475875 ZBTB48P10074 688 aaPredicted RBP19.07■□□□□ 0.64
CSNK2B-207ENST00000475875 PROSER3Q2NL68 480 aa19.07■□□□□ 0.64
CSNK2B-207ENST00000475875 PRAMEF18Q5VWM3 479 aa19.07■□□□□ 0.64
CSNK2B-207ENST00000475875 USP17L1Q7RTZ2 530 aa19.07■□□□□ 0.64
CSNK2B-207ENST00000475875 PODNQ7Z5L7 613 aa19.07■□□□□ 0.64
CSNK2B-207ENST00000475875 ZNF333Q96JL9 665 aa19.07■□□□□ 0.64
CSNK2B-207ENST00000475875 EFCC1Q9HA90 598 aa19.07■□□□□ 0.64
CSNK2B-207ENST00000475875 GGA1Q9UJY5 639 aa19.07■□□□□ 0.64
CSNK2B-207ENST00000475875 PSME4Q14997 1843 aa19.07■□□□□ 0.64
CSNK2B-207ENST00000475875 H0YGN5 161 aa19.06■□□□□ 0.64
CSNK2B-207ENST00000475875 EIF2S2P20042 333 aaKnown RBP19.06■□□□□ 0.64
CSNK2B-207ENST00000475875 NBPF9Q3BBW0 867 aa19.05■□□□□ 0.64
CSNK2B-207ENST00000475875 NBPF11Q86T75 865 aa19.05■□□□□ 0.64
CSNK2B-207ENST00000475875 XAGE3Q8WTP9 111 aa19.05■□□□□ 0.64
CSNK2B-207ENST00000475875 ANKIB1Q9P2G1 1089 aa19.05■□□□□ 0.64
CSNK2B-207ENST00000475875 UNCXA6NJT0 531 aa19.04■□□□□ 0.64
CSNK2B-207ENST00000475875 OTUD7BQ6GQQ9 843 aa19.04■□□□□ 0.64
CSNK2B-207ENST00000475875 OGFOD1Q8N543 542 aa19.04■□□□□ 0.64
CSNK2B-207ENST00000475875 CD99L2Q8TCZ2 262 aa19.04■□□□□ 0.64
CSNK2B-207ENST00000475875 SCAF8Q9UPN6 1271 aaKnown RBP19.04■□□□□ 0.64
CSNK2B-207ENST00000475875 COL6A3P12111 3177 aa19.04■□□□□ 0.64
CSNK2B-207ENST00000475875 WNT10BO00744 389 aa19.03■□□□□ 0.64
CSNK2B-207ENST00000475875 ANXA1P04083 346 aa19.03■□□□□ 0.64
CSNK2B-207ENST00000475875 AIMP1Q12904 312 aaKnown RBP19.03■□□□□ 0.64
CSNK2B-207ENST00000475875 ARHGEF6Q15052 776 aa19.03■□□□□ 0.64
CSNK2B-207ENST00000475875 MAP3K11Q16584 847 aa19.03■□□□□ 0.64
CSNK2B-207ENST00000475875 APOBEC3FQ8IUX4 373 aaKnown RBP19.03■□□□□ 0.64
CSNK2B-207ENST00000475875 BABAM1Q9NWV8 329 aa19.03■□□□□ 0.64
CSNK2B-207ENST00000475875 TSPYL4Q9UJ04 414 aa19.03■□□□□ 0.64
CSNK2B-207ENST00000475875 MYO3BQ8WXR4 1341 aa19.02■□□□□ 0.64
CSNK2B-207ENST00000475875 IGF2BP3O00425 579 aaKnown RBP eCLIP19.02■□□□□ 0.64
CSNK2B-207ENST00000475875 SP3Q02447 781 aa19.02■□□□□ 0.64
CSNK2B-207ENST00000475875 CNGB1Q14028 1251 aaPredicted RBP19.02■□□□□ 0.64
CSNK2B-207ENST00000475875 CHRDL2Q6WN34 429 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms