RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 USP44Q9H0E7 712 aa18.16■□□□□ 0.5
ABCF3-211ENST00000475728 GGA1Q9UJY5 639 aa18.16■□□□□ 0.5
ABCF3-211ENST00000475728 WASHC4Q2M389 1173 aa18.15■□□□□ 0.5
ABCF3-211ENST00000475728 INTS3Q68E01 1043 aaKnown RBP18.15■□□□□ 0.5
ABCF3-211ENST00000475728 SLC51AQ86UW1 340 aa18.15■□□□□ 0.5
ABCF3-211ENST00000475728 SUCLG2Q96I99 432 aa18.15■□□□□ 0.5
ABCF3-211ENST00000475728 ANKRD2Q9GZV1 360 aa18.15■□□□□ 0.5
ABCF3-211ENST00000475728 NMRK2Q9NPI5 230 aa18.15■□□□□ 0.5
ABCF3-211ENST00000475728 CCDC88AQ3V6T2 1871 aa18.14■□□□□ 0.49
ABCF3-211ENST00000475728 UFL1O94874 794 aa18.14■□□□□ 0.49
ABCF3-211ENST00000475728 UBTFL1P0CB47 393 aaPredicted RBP18.14■□□□□ 0.49
ABCF3-211ENST00000475728 TRIM27P14373 513 aa18.14■□□□□ 0.49
ABCF3-211ENST00000475728 VEGFAP15692 232 aaPredicted RBP18.14■□□□□ 0.49
ABCF3-211ENST00000475728 ATP2B4P23634 1241 aa18.14■□□□□ 0.49
ABCF3-211ENST00000475728 EPHA10Q5JZY3 1008 aa18.14■□□□□ 0.49
ABCF3-211ENST00000475728 C16orf71Q8IYS4 520 aaPredicted RBP18.14■□□□□ 0.49
ABCF3-211ENST00000475728 TBC1D16Q8TBP0 767 aa18.14■□□□□ 0.49
ABCF3-211ENST00000475728 KLRG1Q96E93 195 aa18.14■□□□□ 0.49
ABCF3-211ENST00000475728 ZNRF3Q9ULT6 936 aa18.14■□□□□ 0.49
ABCF3-211ENST00000475728 MINPP1Q9UNW1 487 aa18.14■□□□□ 0.49
ABCF3-211ENST00000475728 RABL6Q3YEC7 729 aaPredicted RBP18.13■□□□□ 0.49
ABCF3-211ENST00000475728 ZC3H12CQ9C0D7 883 aaKnown RBP18.13■□□□□ 0.49
ABCF3-211ENST00000475728 BICC1Q9H694 974 aaKnown RBP18.13■□□□□ 0.49
ABCF3-211ENST00000475728 POLLQ9UGP5 575 aa18.13■□□□□ 0.49
ABCF3-211ENST00000475728 TAF1P21675 1872 aa18.13■□□□□ 0.49
ABCF3-211ENST00000475728 IQCA1LA6NCM1 817 aa18.12■□□□□ 0.49
ABCF3-211ENST00000475728 GNAI3P08754 354 aa18.12■□□□□ 0.49
ABCF3-211ENST00000475728 GPC2Q8N158 579 aa18.12■□□□□ 0.49
ABCF3-211ENST00000475728 RRAGCQ9HB90 399 aa18.12■□□□□ 0.49
ABCF3-211ENST00000475728 LEMD3Q9Y2U8 911 aa18.12■□□□□ 0.49
ABCF3-211ENST00000475728 G3V3G9 751 aa18.11■□□□□ 0.49
ABCF3-211ENST00000475728 DDNO94850 711 aaPredicted RBP18.11■□□□□ 0.49
ABCF3-211ENST00000475728 DCAF8Q5TAQ9 597 aa18.11■□□□□ 0.49
ABCF3-211ENST00000475728 LDHAL6AQ6ZMR3 332 aa18.11■□□□□ 0.49
ABCF3-211ENST00000475728 FTSJ3Q8IY81 847 aaKnown RBP18.11■□□□□ 0.49
ABCF3-211ENST00000475728 JMYQ8N9B5 988 aa18.11■□□□□ 0.49
ABCF3-211ENST00000475728 KAZALD1Q96I82 304 aa18.11■□□□□ 0.49
ABCF3-211ENST00000475728 L3MBTL3Q96JM7 780 aaPredicted RBP18.11■□□□□ 0.49
ABCF3-211ENST00000475728 ZNF541Q9H0D2 1346 aa18.11■□□□□ 0.49
ABCF3-211ENST00000475728 DUOX1Q9NRD9 1551 aa18.11■□□□□ 0.49
ABCF3-211ENST00000475728 COL4A1P02462 1669 aa18.11■□□□□ 0.49
ABCF3-211ENST00000475728 MS4A1P11836 297 aa18.1■□□□□ 0.49
ABCF3-211ENST00000475728 TNIP1Q15025 636 aa18.1■□□□□ 0.49
ABCF3-211ENST00000475728 ANKRD44Q8N8A2 993 aa18.1■□□□□ 0.49
ABCF3-211ENST00000475728 CNNM1Q9NRU3 951 aa18.1■□□□□ 0.49
ABCF3-211ENST00000475728 RIMBP2O15034 1052 aa18.09■□□□□ 0.49
ABCF3-211ENST00000475728 KCNJ4P48050 445 aa18.09■□□□□ 0.49
ABCF3-211ENST00000475728 CLUAP1Q96AJ1 413 aa18.09■□□□□ 0.49
ABCF3-211ENST00000475728 CHRNDQ07001 517 aa18.08■□□□□ 0.48
ABCF3-211ENST00000475728 DZIP1LQ8IYY4 767 aaKnown RBP18.08■□□□□ 0.48
ABCF3-211ENST00000475728 RCAN3Q9UKA8 241 aa18.08■□□□□ 0.48
ABCF3-211ENST00000475728 GJA3Q9Y6H8 435 aa18.08■□□□□ 0.48
ABCF3-211ENST00000475728 MED23Q9ULK4 1368 aa18.07■□□□□ 0.48
ABCF3-211ENST00000475728 LTBP1Q14766 1721 aa18.07■□□□□ 0.48
ABCF3-211ENST00000475728 COL4A5P29400 1685 aa18.07■□□□□ 0.48
ABCF3-211ENST00000475728 LMOD1P29536 600 aaPredicted RBP18.07■□□□□ 0.48
ABCF3-211ENST00000475728 CXCL9Q07325 125 aa18.07■□□□□ 0.48
ABCF3-211ENST00000475728 CIAPIN1Q6FI81 312 aa18.07■□□□□ 0.48
ABCF3-211ENST00000475728 RBM46Q8TBY0 533 aaKnown RBP18.07■□□□□ 0.48
ABCF3-211ENST00000475728 MEIS3Q99687 375 aa18.07■□□□□ 0.48
ABCF3-211ENST00000475728 HACL1Q9UJ83 578 aa18.07■□□□□ 0.48
ABCF3-211ENST00000475728 ZNF804BA4D1E1 1349 aa18.06■□□□□ 0.48
ABCF3-211ENST00000475728 ECE2O60344 883 aa18.06■□□□□ 0.48
ABCF3-211ENST00000475728 ZNF594Q96JF6 807 aaPredicted RBP18.06■□□□□ 0.48
ABCF3-211ENST00000475728 DBNDD1Q9H9R9 158 aa18.06■□□□□ 0.48
ABCF3-211ENST00000475728 LRRFIP2Q9Y608 721 aaKnown RBP18.06■□□□□ 0.48
ABCF3-211ENST00000475728 MROH5Q6ZUA9 1318 aa18.05■□□□□ 0.48
ABCF3-211ENST00000475728 DOK7Q18PE1 504 aa18.05■□□□□ 0.48
ABCF3-211ENST00000475728 TMEM57Q8N5G2 664 aa18.05■□□□□ 0.48
ABCF3-211ENST00000475728 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.05■□□□□ 0.48
ABCF3-211ENST00000475728 GPR101Q96P66 508 aaPredicted RBP18.05■□□□□ 0.48
ABCF3-211ENST00000475728 PCNTO95613 3336 aa18.04■□□□□ 0.48
ABCF3-211ENST00000475728 POTECB2RU33 542 aa18.04■□□□□ 0.48
ABCF3-211ENST00000475728 RAD17O75943 681 aa18.04■□□□□ 0.48
ABCF3-211ENST00000475728 GNAI2P04899 355 aa18.04■□□□□ 0.48
ABCF3-211ENST00000475728 FSTL1Q12841 308 aa18.04■□□□□ 0.48
ABCF3-211ENST00000475728 PODNQ7Z5L7 613 aa18.04■□□□□ 0.48
ABCF3-211ENST00000475728 PNMA8AQ86V59 439 aaPredicted RBP18.04■□□□□ 0.48
ABCF3-211ENST00000475728 FBXO3Q9UK99 471 aa18.04■□□□□ 0.48
ABCF3-211ENST00000475728 TNNQ9UQP3 1299 aa18.04■□□□□ 0.48
ABCF3-211ENST00000475728 YDJCA8MPS7 323 aa18.03■□□□□ 0.48
ABCF3-211ENST00000475728 ITPRIPQ8IWB1 547 aa18.03■□□□□ 0.48
ABCF3-211ENST00000475728 SMC1BQ8NDV3 1235 aa18.03■□□□□ 0.48
ABCF3-211ENST00000475728 COA1Q9GZY4 146 aa18.03■□□□□ 0.48
ABCF3-211ENST00000475728 TAF1DQ9H5J8 278 aaPredicted RBP18.03■□□□□ 0.48
ABCF3-211ENST00000475728 RPS12P25398 132 aaKnown RBP18.02■□□□□ 0.48
ABCF3-211ENST00000475728 EPHX2P34913 555 aa18.02■□□□□ 0.48
ABCF3-211ENST00000475728 C15orf52Q6ZUT6 534 aaKnown RBP18.02■□□□□ 0.48
ABCF3-211ENST00000475728 HELBQ8NG08 1087 aaPredicted RBP18.02■□□□□ 0.48
ABCF3-211ENST00000475728 YTHDC1Q96MU7 727 aaKnown RBP18.02■□□□□ 0.48
ABCF3-211ENST00000475728 RIPOR2Q9Y4F9 1068 aa18.02■□□□□ 0.48
ABCF3-211ENST00000475728 SPEF2Q9C093 1822 aa18.02■□□□□ 0.47
ABCF3-211ENST00000475728 PLIN1O60240 522 aa18.01■□□□□ 0.47
ABCF3-211ENST00000475728 TAF5LO75529 589 aa18.01■□□□□ 0.47
ABCF3-211ENST00000475728 UBE4AQ14139 1066 aa18.01■□□□□ 0.47
ABCF3-211ENST00000475728 METTL24Q5JXM2 366 aa18.01■□□□□ 0.47
ABCF3-211ENST00000475728 SCN4AP35499 1836 aa18■□□□□ 0.47
ABCF3-211ENST00000475728 EYA2O00167 538 aa18■□□□□ 0.47
ABCF3-211ENST00000475728 PSMD14O00487 310 aa18■□□□□ 0.47
ABCF3-211ENST00000475728 RFX5P48382 616 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms