RNA–Protein interactions for RNA: ENST00000475684.2

CCHCR1-212, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 786 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-212ENST00000475684 GRAPQ13588 217 aa13.41□□□□□ -0.26
CCHCR1-212ENST00000475684 PRAMEF18Q5VWM3 479 aa13.41□□□□□ -0.26
CCHCR1-212ENST00000475684 GRAPLQ8TC17 118 aaPredicted RBP13.41□□□□□ -0.26
CCHCR1-212ENST00000475684 CD99L2Q8TCZ2 262 aa13.41□□□□□ -0.26
CCHCR1-212ENST00000475684 RRP7AQ9Y3A4 280 aaKnown RBP13.41□□□□□ -0.26
CCHCR1-212ENST00000475684 KNSTRNQ9Y448 316 aa13.41□□□□□ -0.26
CCHCR1-212ENST00000475684 RTL9Q8NET4 1388 aa13.41□□□□□ -0.26
CCHCR1-212ENST00000475684 PITPNM2Q9BZ72 1349 aa13.4□□□□□ -0.26
CCHCR1-212ENST00000475684 MYL6BP14649 208 aa13.4□□□□□ -0.26
CCHCR1-212ENST00000475684 SLC4A8Q2Y0W8 1093 aa13.4□□□□□ -0.26
CCHCR1-212ENST00000475684 PARP10Q53GL7 1025 aa13.4□□□□□ -0.26
CCHCR1-212ENST00000475684 DPF3Q92784 378 aa13.4□□□□□ -0.26
CCHCR1-212ENST00000475684 UTP14AQ9BVJ6 771 aaKnown RBP13.4□□□□□ -0.26
CCHCR1-212ENST00000475684 EFCC1Q9HA90 598 aa13.4□□□□□ -0.26
CCHCR1-212ENST00000475684 NSFL1CQ9UNZ2 370 aaKnown RBP13.4□□□□□ -0.26
CCHCR1-212ENST00000475684 DUOX1Q9NRD9 1551 aa13.4□□□□□ -0.26
CCHCR1-212ENST00000475684 VIL1P09327 827 aaKnown RBP13.39□□□□□ -0.27
CCHCR1-212ENST00000475684 TMC4Q7Z404 712 aa13.39□□□□□ -0.27
CCHCR1-212ENST00000475684 NBPF11Q86T75 865 aa13.39□□□□□ -0.27
CCHCR1-212ENST00000475684 ZNF333Q96JL9 665 aa13.39□□□□□ -0.27
CCHCR1-212ENST00000475684 NF2P35240 595 aa13.38□□□□□ -0.27
CCHCR1-212ENST00000475684 INHBEP58166 350 aa13.38□□□□□ -0.27
CCHCR1-212ENST00000475684 ZNF280AP59817 542 aaPredicted RBP13.38□□□□□ -0.27
CCHCR1-212ENST00000475684 PTPN12Q05209 780 aaKnown RBP13.38□□□□□ -0.27
CCHCR1-212ENST00000475684 SPRYD7Q5W111 196 aa13.38□□□□□ -0.27
CCHCR1-212ENST00000475684 GIGYF2Q6Y7W6 1299 aaKnown RBP13.38□□□□□ -0.27
CCHCR1-212ENST00000475684 MCM10Q7L590 875 aa13.38□□□□□ -0.27
CCHCR1-212ENST00000475684 IFNL1Q8IU54 200 aa13.38□□□□□ -0.27
CCHCR1-212ENST00000475684 RTF1Q92541 710 aaKnown RBP13.38□□□□□ -0.27
CCHCR1-212ENST00000475684 EYA3Q99504 573 aa13.38□□□□□ -0.27
CCHCR1-212ENST00000475684 RANBP2P49792 3224 aaKnown RBP13.37□□□□□ -0.27
CCHCR1-212ENST00000475684 G3V3G9 751 aa13.37□□□□□ -0.27
CCHCR1-212ENST00000475684 HCLS1P14317 486 aaPredicted RBP13.37□□□□□ -0.27
CCHCR1-212ENST00000475684 PRKG1Q13976 671 aa13.37□□□□□ -0.27
CCHCR1-212ENST00000475684 DCAF8Q5TAQ9 597 aa13.37□□□□□ -0.27
CCHCR1-212ENST00000475684 PHACTR3Q96KR7 559 aa13.37□□□□□ -0.27
CCHCR1-212ENST00000475684 MYOZ2Q9NPC6 264 aa13.37□□□□□ -0.27
CCHCR1-212ENST00000475684 POLLQ9UGP5 575 aa13.37□□□□□ -0.27
CCHCR1-212ENST00000475684 MANSC4A6NHS7 340 aaPredicted RBP13.36□□□□□ -0.27
CCHCR1-212ENST00000475684 MYCP01106 439 aaPredicted RBP13.36□□□□□ -0.27
CCHCR1-212ENST00000475684 SLC9C1Q4G0N8 1177 aa13.36□□□□□ -0.27
CCHCR1-212ENST00000475684 ARMC9Q7Z3E5 817 aa13.36□□□□□ -0.27
CCHCR1-212ENST00000475684 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.36□□□□□ -0.27
CCHCR1-212ENST00000475684 ZNF609O15014 1411 aa13.36□□□□□ -0.27
CCHCR1-212ENST00000475684 TRIOBPQ9H2D6 2365 aa13.35□□□□□ -0.27
CCHCR1-212ENST00000475684 WTIPA6NIX2 430 aaPredicted RBP13.35□□□□□ -0.27
CCHCR1-212ENST00000475684 USP17L8P0C7I0 530 aa13.35□□□□□ -0.27
CCHCR1-212ENST00000475684 GPSM2P81274 684 aa13.35□□□□□ -0.27
CCHCR1-212ENST00000475684 RSBN1LQ6PCB5 846 aaPredicted RBP13.35□□□□□ -0.27
CCHCR1-212ENST00000475684 AGBL3Q8NEM8 1001 aa13.35□□□□□ -0.27
CCHCR1-212ENST00000475684 COL25A1Q9BXS0 654 aaPredicted RBP13.35□□□□□ -0.27
CCHCR1-212ENST00000475684 ZC3H12CQ9C0D7 883 aaKnown RBP13.35□□□□□ -0.27
CCHCR1-212ENST00000475684 MIS18AQ9NYP9 233 aa13.35□□□□□ -0.27
CCHCR1-212ENST00000475684 IGF2BP3O00425 579 aaKnown RBP eCLIP13.34□□□□□ -0.27
CCHCR1-212ENST00000475684 SP3Q02447 781 aa13.34□□□□□ -0.27
CCHCR1-212ENST00000475684 NECTIN2Q92692 538 aa13.34□□□□□ -0.27
CCHCR1-212ENST00000475684 PRO3102Q9H379 93 aa13.34□□□□□ -0.27
CCHCR1-212ENST00000475684 DDX60Q8IY21 1712 aaKnown RBP13.33□□□□□ -0.27
CCHCR1-212ENST00000475684 LAMB4A4D0S4 1761 aa13.33□□□□□ -0.28
CCHCR1-212ENST00000475684 LAMB2P55268 1798 aa13.33□□□□□ -0.28
CCHCR1-212ENST00000475684 ANKRD36CQ5JPF3 1778 aa13.33□□□□□ -0.28
CCHCR1-212ENST00000475684 SOX1O00570 391 aaPredicted RBP13.33□□□□□ -0.28
CCHCR1-212ENST00000475684 PRKAR2BP31323 418 aa13.33□□□□□ -0.28
CCHCR1-212ENST00000475684 CRHR2Q13324 411 aa13.33□□□□□ -0.28
CCHCR1-212ENST00000475684 DCTN1Q14203 1278 aa13.33□□□□□ -0.28
CCHCR1-212ENST00000475684 TAF7Q15545 349 aaPredicted RBP13.33□□□□□ -0.28
CCHCR1-212ENST00000475684 AMER1Q5JTC6 1135 aaPredicted RBP13.33□□□□□ -0.28
CCHCR1-212ENST00000475684 TBC1D16Q8TBP0 767 aa13.33□□□□□ -0.28
CCHCR1-212ENST00000475684 SLC10A4Q96EP9 437 aa13.33□□□□□ -0.28
CCHCR1-212ENST00000475684 LRCH3Q96II8 777 aa13.33□□□□□ -0.28
CCHCR1-212ENST00000475684 LRRC37AA6NMS7 1700 aa13.33□□□□□ -0.28
CCHCR1-212ENST00000475684 UNC80Q8N2C7 3258 aa13.33□□□□□ -0.28
CCHCR1-212ENST00000475684 CAP1Q01518 475 aa13.32□□□□□ -0.28
CCHCR1-212ENST00000475684 ARHGEF6Q15052 776 aa13.32□□□□□ -0.28
CCHCR1-212ENST00000475684 NBPF9Q3BBW0 867 aa13.32□□□□□ -0.28
CCHCR1-212ENST00000475684 LDLRAD1Q5T700 205 aa13.32□□□□□ -0.28
CCHCR1-212ENST00000475684 OTUD7BQ6GQQ9 843 aa13.32□□□□□ -0.28
CCHCR1-212ENST00000475684 ANGEL1Q9UNK9 670 aaKnown RBP13.32□□□□□ -0.28
CCHCR1-212ENST00000475684 PTCH2Q9Y6C5 1203 aa13.32□□□□□ -0.28
CCHCR1-212ENST00000475684 CUL9Q8IWT3 2517 aa13.31□□□□□ -0.28
CCHCR1-212ENST00000475684 CELF1Q92879 486 aaKnown RBP13.31□□□□□ -0.28
CCHCR1-212ENST00000475684 TRMT112Q9UI30 125 aaKnown RBP13.31□□□□□ -0.28
CCHCR1-212ENST00000475684 TAF1P21675 1872 aa13.31□□□□□ -0.28
CCHCR1-212ENST00000475684 A0A1W2PPC1 479 aa13.3□□□□□ -0.28
CCHCR1-212ENST00000475684 ZBTB48P10074 688 aaPredicted RBP13.3□□□□□ -0.28
CCHCR1-212ENST00000475684 ANKRD13DQ6ZTN6 518 aa13.3□□□□□ -0.28
CCHCR1-212ENST00000475684 NLRP10Q86W26 655 aa13.3□□□□□ -0.28
CCHCR1-212ENST00000475684 GMLQ99445 158 aa13.3□□□□□ -0.28
CCHCR1-212ENST00000475684 NR2E3Q9Y5X4 410 aa13.3□□□□□ -0.28
CCHCR1-212ENST00000475684 SH3TC1Q8TE82 1336 aa13.3□□□□□ -0.28
CCHCR1-212ENST00000475684 ABCB7O75027 752 aa13.29□□□□□ -0.28
CCHCR1-212ENST00000475684 SH3TC2Q8TF17 1288 aa13.29□□□□□ -0.28
CCHCR1-212ENST00000475684 WNK4Q96J92 1243 aa13.29□□□□□ -0.28
CCHCR1-212ENST00000475684 HTATIP2Q9BUP3 242 aa13.29□□□□□ -0.28
CCHCR1-212ENST00000475684 FZD1Q9UP38 647 aa13.29□□□□□ -0.28
CCHCR1-212ENST00000475684 KDM3BQ7LBC6 1761 aa13.29□□□□□ -0.28
CCHCR1-212ENST00000475684 KIAA0100Q14667 2235 aaKnown RBP13.28□□□□□ -0.28
CCHCR1-212ENST00000475684 DEFB123Q8N688 67 aa13.28□□□□□ -0.28
CCHCR1-212ENST00000475684 THUMPD2Q9BTF0 503 aaKnown RBP13.28□□□□□ -0.28
CCHCR1-212ENST00000475684 RSPH6AQ9H0K4 717 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms