RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 CHMP4AQ9BY43 222 aa20.76■□□□□ 0.91
CCM2-207ENST00000475551 PSDA5PKW4 1024 aaPredicted RBP20.76■□□□□ 0.91
CCM2-207ENST00000475551 H3BQV1 296 aa20.76■□□□□ 0.91
CCM2-207ENST00000475551 IFFO2Q5TF58 517 aa20.76■□□□□ 0.91
CCM2-207ENST00000475551 AACSQ86V21 672 aa20.76■□□□□ 0.91
CCM2-207ENST00000475551 A0A0D9SFI3 127 aa20.75■□□□□ 0.91
CCM2-207ENST00000475551 HOXB7P09629 217 aa20.75■□□□□ 0.91
CCM2-207ENST00000475551 ADD1P35611 737 aaKnown RBP20.75■□□□□ 0.91
CCM2-207ENST00000475551 ERCC6LQ2NKX8 1250 aa20.75■□□□□ 0.91
CCM2-207ENST00000475551 DNAJC2Q99543 621 aaKnown RBP20.75■□□□□ 0.91
CCM2-207ENST00000475551 PHF8Q9UPP1 1060 aa20.75■□□□□ 0.91
CCM2-207ENST00000475551 TAF6LQ9Y6J9 622 aa20.75■□□□□ 0.91
CCM2-207ENST00000475551 KRT32Q14532 448 aa20.75■□□□□ 0.91
CCM2-207ENST00000475551 E4F1Q66K89 784 aaPredicted RBP20.75■□□□□ 0.91
CCM2-207ENST00000475551 CEP57L1Q8IYX8 460 aa20.75■□□□□ 0.91
CCM2-207ENST00000475551 CLCN6P51797 869 aa20.74■□□□□ 0.91
CCM2-207ENST00000475551 NBPF11Q86T75 865 aa20.74■□□□□ 0.91
CCM2-207ENST00000475551 NGDNQ8NEJ9 315 aaKnown RBP20.74■□□□□ 0.91
CCM2-207ENST00000475551 DHX8Q14562 1220 aaKnown RBP20.73■□□□□ 0.91
CCM2-207ENST00000475551 CCDC73Q6ZRK6 1079 aa20.73■□□□□ 0.91
CCM2-207ENST00000475551 ENGASEQ8NFI3 743 aa20.73■□□□□ 0.91
CCM2-207ENST00000475551 PPP1R13BQ96KQ4 1090 aa20.73■□□□□ 0.91
CCM2-207ENST00000475551 NAT10Q9H0A0 1025 aaKnown RBP20.73■□□□□ 0.91
CCM2-207ENST00000475551 GOLPH3LQ9H4A5 285 aa20.73■□□□□ 0.91
CCM2-207ENST00000475551 EIF2S2P20042 333 aaKnown RBP20.73■□□□□ 0.91
CCM2-207ENST00000475551 CCDC150Q8NCX0 1101 aa20.73■□□□□ 0.91
CCM2-207ENST00000475551 DDX11Q96FC9 970 aa20.73■□□□□ 0.91
CCM2-207ENST00000475551 KINO60870 393 aaKnown RBP20.72■□□□□ 0.91
CCM2-207ENST00000475551 USPL1Q5W0Q7 1092 aa20.72■□□□□ 0.91
CCM2-207ENST00000475551 ATL3Q6DD88 541 aa20.72■□□□□ 0.91
CCM2-207ENST00000475551 SLAIN2Q9P270 581 aa20.72■□□□□ 0.91
CCM2-207ENST00000475551 CHPF2Q9P2E5 772 aa20.72■□□□□ 0.91
CCM2-207ENST00000475551 HDAC5Q9UQL6 1122 aa20.72■□□□□ 0.91
CCM2-207ENST00000475551 PA2G4Q9UQ80 394 aaKnown RBP20.72■□□□□ 0.91
CCM2-207ENST00000475551 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.72■□□□□ 0.91
CCM2-207ENST00000475551 NPHP1O15259 732 aa20.71■□□□□ 0.91
CCM2-207ENST00000475551 PNMA6AP0CW24 399 aaPredicted RBP20.71■□□□□ 0.91
CCM2-207ENST00000475551 FAM160A1Q05DH4 1040 aa20.71■□□□□ 0.91
CCM2-207ENST00000475551 NAA16Q6N069 864 aaPredicted RBP20.71■□□□□ 0.91
CCM2-207ENST00000475551 AOPEPQ8N6M6 819 aa20.71■□□□□ 0.91
CCM2-207ENST00000475551 SMARCC2Q8TAQ2 1214 aa20.71■□□□□ 0.91
CCM2-207ENST00000475551 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.71■□□□□ 0.91
CCM2-207ENST00000475551 PLA2G4AP47712 749 aa20.71■□□□□ 0.91
CCM2-207ENST00000475551 EIF4A1P60842 406 aaKnown RBP20.71■□□□□ 0.91
CCM2-207ENST00000475551 SYT10Q6XYQ8 523 aa20.71■□□□□ 0.91
CCM2-207ENST00000475551 LLPHQ9BRT6 129 aaKnown RBP20.71■□□□□ 0.91
CCM2-207ENST00000475551 FSD1Q9BTV5 496 aa20.71■□□□□ 0.91
CCM2-207ENST00000475551 TSPYL1Q9H0U9 437 aa20.71■□□□□ 0.91
CCM2-207ENST00000475551 ALDH1L1O75891 902 aa20.7■□□□□ 0.9
CCM2-207ENST00000475551 ZRANB2O95218 330 aaKnown RBP eCLIP20.7■□□□□ 0.9
CCM2-207ENST00000475551 EAF2Q96CJ1 260 aaPredicted RBP20.7■□□□□ 0.9
CCM2-207ENST00000475551 NEK1Q96PY6 1258 aa20.7■□□□□ 0.9
CCM2-207ENST00000475551 TAF5LO75529 589 aa20.69■□□□□ 0.9
CCM2-207ENST00000475551 CAPN2P17655 700 aa20.69■□□□□ 0.9
CCM2-207ENST00000475551 CEBPZQ03701 1054 aaKnown RBP20.69■□□□□ 0.9
CCM2-207ENST00000475551 CEMIPQ8WUJ3 1361 aa20.69■□□□□ 0.9
CCM2-207ENST00000475551 SASH1O94885 1247 aa20.69■□□□□ 0.9
CCM2-207ENST00000475551 ARHGAP29Q52LW3 1261 aa20.69■□□□□ 0.9
CCM2-207ENST00000475551 NUTM2GQ5VZR2 741 aa20.69■□□□□ 0.9
CCM2-207ENST00000475551 ZNF589Q86UQ0 364 aaPredicted RBP20.69■□□□□ 0.9
CCM2-207ENST00000475551 LRRN4CLQ8ND94 238 aa20.69■□□□□ 0.9
CCM2-207ENST00000475551 BPIFA3Q9BQP9 254 aa20.69■□□□□ 0.9
CCM2-207ENST00000475551 ARGLU1Q9NWB6 273 aaPredicted RBP20.69■□□□□ 0.9
CCM2-207ENST00000475551 HNRNPH2P55795 449 aaKnown RBP20.68■□□□□ 0.9
CCM2-207ENST00000475551 C9orf78Q9NZ63 289 aaPredicted RBP20.68■□□□□ 0.9
CCM2-207ENST00000475551 NRDCO43847 1150 aa20.68■□□□□ 0.9
CCM2-207ENST00000475551 ARMCX5Q6P1M9 558 aa20.68■□□□□ 0.9
CCM2-207ENST00000475551 Q6ZUG5 572 aa20.68■□□□□ 0.9
CCM2-207ENST00000475551 DDX17Q92841 729 aaKnown RBP20.68■□□□□ 0.9
CCM2-207ENST00000475551 ZNF396Q96N95 335 aaPredicted RBP20.68■□□□□ 0.9
CCM2-207ENST00000475551 MYH15Q9Y2K3 1946 aa20.68■□□□□ 0.9
CCM2-207ENST00000475551 TEX35Q5T0J7 233 aa20.67■□□□□ 0.9
CCM2-207ENST00000475551 BRINP3Q76B58 766 aa20.67■□□□□ 0.9
CCM2-207ENST00000475551 NAP1L2Q9ULW6 460 aaPredicted RBP20.67■□□□□ 0.9
CCM2-207ENST00000475551 ATP8B1O43520 1251 aa20.67■□□□□ 0.9
CCM2-207ENST00000475551 SFPQP23246 707 aaKnown RBP eCLIP20.67■□□□□ 0.9
CCM2-207ENST00000475551 TMCO3Q6UWJ1 677 aa20.67■□□□□ 0.9
CCM2-207ENST00000475551 IPO4Q8TEX9 1081 aaKnown RBP20.67■□□□□ 0.9
CCM2-207ENST00000475551 USP28Q96RU2 1077 aa20.67■□□□□ 0.9
CCM2-207ENST00000475551 CCDC8Q9H0W5 538 aaPredicted RBP20.67■□□□□ 0.9
CCM2-207ENST00000475551 BOLA2Q9H3K6 86 aa20.67■□□□□ 0.9
CCM2-207ENST00000475551 PHLPP2Q6ZVD8 1323 aa20.67■□□□□ 0.9
CCM2-207ENST00000475551 A0A087WWV3 80 aa20.66■□□□□ 0.9
CCM2-207ENST00000475551 CCP110O43303 1012 aa20.66■□□□□ 0.9
CCM2-207ENST00000475551 HSP90B1P14625 803 aaKnown RBP20.66■□□□□ 0.9
CCM2-207ENST00000475551 TPM4P67936 248 aa20.66■□□□□ 0.9
CCM2-207ENST00000475551 SCRN1Q12765 414 aa20.66■□□□□ 0.9
CCM2-207ENST00000475551 G3BP1Q13283 466 aaKnown RBP eCLIP20.66■□□□□ 0.9
CCM2-207ENST00000475551 FSIP1Q8NA03 581 aa20.66■□□□□ 0.9
CCM2-207ENST00000475551 ORC3Q9UBD5 711 aaPredicted RBP20.66■□□□□ 0.9
CCM2-207ENST00000475551 VGLL3A8MV65 326 aa20.66■□□□□ 0.9
CCM2-207ENST00000475551 SRRTQ9BXP5 876 aaKnown RBP20.66■□□□□ 0.9
CCM2-207ENST00000475551 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.66■□□□□ 0.9
CCM2-207ENST00000475551 MED1Q15648 1581 aaPredicted RBP20.66■□□□□ 0.9
CCM2-207ENST00000475551 KIF1AQ12756 1690 aa20.65■□□□□ 0.9
CCM2-207ENST00000475551 PFKFB2O60825 505 aa20.65■□□□□ 0.9
CCM2-207ENST00000475551 HOXC9P31274 260 aa20.65■□□□□ 0.9
CCM2-207ENST00000475551 ETF1P62495 437 aaKnown RBP20.65■□□□□ 0.9
CCM2-207ENST00000475551 PSME1Q06323 249 aa20.65■□□□□ 0.9
CCM2-207ENST00000475551 PDE4CQ08493 712 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms