RNA–Protein interactions for RNA: ENST00000475403.2

LSAMP-204, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-204ENST00000475403 ANKRD36CQ5JPF3 1778 aa8.91□□□□□ -0.98
LSAMP-204ENST00000475403 DUOX1Q9NRD9 1551 aa8.91□□□□□ -0.98
LSAMP-204ENST00000475403 ASTN2O75129 1339 aaPredicted RBP8.91□□□□□ -0.98
LSAMP-204ENST00000475403 HCLS1P14317 486 aaPredicted RBP8.91□□□□□ -0.98
LSAMP-204ENST00000475403 DEKP35659 375 aaKnown RBP8.91□□□□□ -0.98
LSAMP-204ENST00000475403 SCARF1Q14162 830 aa8.91□□□□□ -0.98
LSAMP-204ENST00000475403 DCTN1Q14203 1278 aa8.91□□□□□ -0.98
LSAMP-204ENST00000475403 TAF7Q15545 349 aaPredicted RBP8.91□□□□□ -0.98
LSAMP-204ENST00000475403 DOK7Q18PE1 504 aa8.91□□□□□ -0.98
LSAMP-204ENST00000475403 PNISRQ8TF01 805 aaKnown RBP8.91□□□□□ -0.98
LSAMP-204ENST00000475403 MIS18AQ9NYP9 233 aa8.91□□□□□ -0.98
LSAMP-204ENST00000475403 NUDCQ9Y266 331 aa8.91□□□□□ -0.98
LSAMP-204ENST00000475403 CENPFP49454 3210 aa8.9□□□□□ -0.98
LSAMP-204ENST00000475403 RTL9Q8NET4 1388 aa8.9□□□□□ -0.98
LSAMP-204ENST00000475403 UBE2Q2LH0YL09 131 aa8.9□□□□□ -0.98
LSAMP-204ENST00000475403 ALDH1A1P00352 501 aa8.9□□□□□ -0.98
LSAMP-204ENST00000475403 NEFMP07197 916 aa8.9□□□□□ -0.98
LSAMP-204ENST00000475403 MOB2Q70IA6 237 aa8.9□□□□□ -0.98
LSAMP-204ENST00000475403 TMEM106CQ9BVX2 250 aa8.9□□□□□ -0.98
LSAMP-204ENST00000475403 RSPH6AQ9H0K4 717 aa8.9□□□□□ -0.98
LSAMP-204ENST00000475403 TRMT112Q9UI30 125 aaKnown RBP8.9□□□□□ -0.98
LSAMP-204ENST00000475403 TIMELESSQ9UNS1 1208 aa8.9□□□□□ -0.98
LSAMP-204ENST00000475403 KIAA0100Q14667 2235 aaKnown RBP8.89□□□□□ -0.99
LSAMP-204ENST00000475403 BRCA2P51587 3418 aa8.89□□□□□ -0.99
LSAMP-204ENST00000475403 RBBP6Q7Z6E9 1792 aaKnown RBP8.89□□□□□ -0.99
LSAMP-204ENST00000475403 LRRC37AA6NMS7 1700 aa8.89□□□□□ -0.99
LSAMP-204ENST00000475403 SH3TC1Q8TE82 1336 aa8.89□□□□□ -0.99
LSAMP-204ENST00000475403 U2AF1L5P0DN76 240 aaPredicted RBP8.89□□□□□ -0.99
LSAMP-204ENST00000475403 TM4SF4P48230 202 aa8.89□□□□□ -0.99
LSAMP-204ENST00000475403 U2AF1Q01081 240 aaKnown RBP eCLIP8.89□□□□□ -0.99
LSAMP-204ENST00000475403 HSP90AB3PQ58FF7 597 aa8.89□□□□□ -0.99
LSAMP-204ENST00000475403 SLC10A5Q5PT55 438 aa8.89□□□□□ -0.99
LSAMP-204ENST00000475403 OTOP1Q7RTM1 612 aa8.89□□□□□ -0.99
LSAMP-204ENST00000475403 ZC3H12CQ9C0D7 883 aaKnown RBP8.89□□□□□ -0.99
LSAMP-204ENST00000475403 ERBB4Q15303 1308 aa8.88□□□□□ -0.99
LSAMP-204ENST00000475403 PITPNM2Q9BZ72 1349 aa8.88□□□□□ -0.99
LSAMP-204ENST00000475403 TAF1P21675 1872 aa8.88□□□□□ -0.99
LSAMP-204ENST00000475403 HTATSF1O43719 755 aaKnown RBP8.88□□□□□ -0.99
LSAMP-204ENST00000475403 EN2P19622 333 aaPredicted RBP8.88□□□□□ -0.99
LSAMP-204ENST00000475403 ARMC9Q7Z3E5 817 aa8.88□□□□□ -0.99
LSAMP-204ENST00000475403 ERO1AQ96HE7 468 aa8.88□□□□□ -0.99
LSAMP-204ENST00000475403 MYOZ2Q9NPC6 264 aa8.88□□□□□ -0.99
LSAMP-204ENST00000475403 KCNQ5Q9NR82 932 aa8.88□□□□□ -0.99
LSAMP-204ENST00000475403 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.88□□□□□ -0.99
LSAMP-204ENST00000475403 SCAF8Q9UPN6 1271 aaKnown RBP8.88□□□□□ -0.99
LSAMP-204ENST00000475403 KDM3BQ7LBC6 1761 aa8.88□□□□□ -0.99
LSAMP-204ENST00000475403 HTTP42858 3142 aa8.88□□□□□ -0.99
LSAMP-204ENST00000475403 TRIOBPQ9H2D6 2365 aa8.87□□□□□ -0.99
LSAMP-204ENST00000475403 VIL1P09327 827 aaKnown RBP8.87□□□□□ -0.99
LSAMP-204ENST00000475403 USP17L8P0C7I0 530 aa8.87□□□□□ -0.99
LSAMP-204ENST00000475403 GPSM2P81274 684 aa8.87□□□□□ -0.99
LSAMP-204ENST00000475403 SLC4A8Q2Y0W8 1093 aa8.87□□□□□ -0.99
LSAMP-204ENST00000475403 RSBN1LQ6PCB5 846 aaPredicted RBP8.87□□□□□ -0.99
LSAMP-204ENST00000475403 CHRDL2Q6WN34 429 aa8.87□□□□□ -0.99
LSAMP-204ENST00000475403 AGBL3Q8NEM8 1001 aa8.87□□□□□ -0.99
LSAMP-204ENST00000475403 THUMPD2Q9BTF0 503 aaKnown RBP8.87□□□□□ -0.99
LSAMP-204ENST00000475403 CFHR5Q9BXR6 569 aa8.87□□□□□ -0.99
LSAMP-204ENST00000475403 ANKIB1Q9P2G1 1089 aa8.87□□□□□ -0.99
LSAMP-204ENST00000475403 POLLQ9UGP5 575 aa8.87□□□□□ -0.99
LSAMP-204ENST00000475403 SZT2Q5T011 3432 aa8.86□□□□□ -0.99
LSAMP-204ENST00000475403 CCER2I3L3R5 266 aa8.86□□□□□ -0.99
LSAMP-204ENST00000475403 UFL1O94874 794 aa8.86□□□□□ -0.99
LSAMP-204ENST00000475403 EIF2S2P20042 333 aaKnown RBP8.86□□□□□ -0.99
LSAMP-204ENST00000475403 ZNF280AP59817 542 aaPredicted RBP8.86□□□□□ -0.99
LSAMP-204ENST00000475403 EIF4A1P60842 406 aaKnown RBP8.86□□□□□ -0.99
LSAMP-204ENST00000475403 AIMP1Q12904 312 aaKnown RBP8.86□□□□□ -0.99
LSAMP-204ENST00000475403 PRKG1Q13976 671 aa8.86□□□□□ -0.99
LSAMP-204ENST00000475403 PRAMEF18Q5VWM3 479 aa8.86□□□□□ -0.99
LSAMP-204ENST00000475403 NLRP10Q86W26 655 aa8.86□□□□□ -0.99
LSAMP-204ENST00000475403 ZNF428Q96B54 188 aa8.86□□□□□ -0.99
LSAMP-204ENST00000475403 R3HDMLQ9H3Y0 253 aa8.86□□□□□ -0.99
LSAMP-204ENST00000475403 EFCC1Q9HA90 598 aa8.86□□□□□ -0.99
LSAMP-204ENST00000475403 PTPN22Q9Y2R2 807 aa8.86□□□□□ -0.99
LSAMP-204ENST00000475403 SCN9AQ15858 1988 aa8.86□□□□□ -0.99
LSAMP-204ENST00000475403 MANSC4A6NHS7 340 aaPredicted RBP8.85□□□□□ -0.99
LSAMP-204ENST00000475403 H0YGN5 161 aa8.85□□□□□ -0.99
LSAMP-204ENST00000475403 SLC9C1Q4G0N8 1177 aa8.85□□□□□ -0.99
LSAMP-204ENST00000475403 OTUD7BQ6GQQ9 843 aa8.85□□□□□ -0.99
LSAMP-204ENST00000475403 NBPF11Q86T75 865 aa8.85□□□□□ -0.99
LSAMP-204ENST00000475403 IFNL1Q8IU54 200 aa8.85□□□□□ -0.99
LSAMP-204ENST00000475403 OGFOD1Q8N543 542 aa8.85□□□□□ -0.99
LSAMP-204ENST00000475403 TBC1D16Q8TBP0 767 aa8.85□□□□□ -0.99
LSAMP-204ENST00000475403 CD99L2Q8TCZ2 262 aa8.85□□□□□ -0.99
LSAMP-204ENST00000475403 NECTIN2Q92692 538 aa8.85□□□□□ -0.99
LSAMP-204ENST00000475403 CELF1Q92879 486 aaKnown RBP8.85□□□□□ -0.99
LSAMP-204ENST00000475403 FBXW7Q969H0 707 aa8.85□□□□□ -0.99
LSAMP-204ENST00000475403 ARMC5Q96C12 935 aa8.85□□□□□ -0.99
LSAMP-204ENST00000475403 GGA1Q9UJY5 639 aa8.85□□□□□ -0.99
LSAMP-204ENST00000475403 ZNF609O15014 1411 aa8.85□□□□□ -0.99
LSAMP-204ENST00000475403 MYCP01106 439 aaPredicted RBP8.84□□□□□ -0.99
LSAMP-204ENST00000475403 INHBEP58166 350 aa8.84□□□□□ -0.99
LSAMP-204ENST00000475403 PTPN12Q05209 780 aaKnown RBP8.84□□□□□ -0.99
LSAMP-204ENST00000475403 ARHGEF6Q15052 776 aa8.84□□□□□ -0.99
LSAMP-204ENST00000475403 SPRYD7Q5W111 196 aa8.84□□□□□ -0.99
LSAMP-204ENST00000475403 ANGEL1Q9UNK9 670 aaKnown RBP8.84□□□□□ -0.99
LSAMP-204ENST00000475403 CEP290O15078 2479 aa8.83□□□□□ -1
LSAMP-204ENST00000475403 USP17L3A6NCW0 530 aa8.83□□□□□ -1
LSAMP-204ENST00000475403 USP17L4A6NCW7 530 aa8.83□□□□□ -1
LSAMP-204ENST00000475403 ANXA1P04083 346 aa8.83□□□□□ -1
LSAMP-204ENST00000475403 NBPF9Q3BBW0 867 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms