RNA–Protein interactions for RNA: ENST00000475323.5

ARHGEF39-203, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 2

Gene ARHGEF39, Length 2,862 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-203ENST00000475323 STOX1Q6ZVD7 989 aa15.91■□□□□ 0.14
ARHGEF39-203ENST00000475323 HMG20BQ9P0W2 317 aa15.91■□□□□ 0.14
ARHGEF39-203ENST00000475323 ADGRL3Q9HAR2 1447 aa15.9■□□□□ 0.14
ARHGEF39-203ENST00000475323 USPL1Q5W0Q7 1092 aa15.9■□□□□ 0.14
ARHGEF39-203ENST00000475323 DDX46Q7L014 1031 aaKnown RBP15.9■□□□□ 0.14
ARHGEF39-203ENST00000475323 CCT2P78371 535 aaKnown RBP15.9■□□□□ 0.14
ARHGEF39-203ENST00000475323 TFCP2Q12800 502 aa15.9■□□□□ 0.14
ARHGEF39-203ENST00000475323 NCOA5Q9HCD5 579 aaKnown RBP15.9■□□□□ 0.14
ARHGEF39-203ENST00000475323 PHF8Q9UPP1 1060 aa15.9■□□□□ 0.14
ARHGEF39-203ENST00000475323 ZNF609O15014 1411 aa15.9■□□□□ 0.14
ARHGEF39-203ENST00000475323 SKILP12757 684 aa15.89■□□□□ 0.13
ARHGEF39-203ENST00000475323 USP28Q96RU2 1077 aa15.89■□□□□ 0.13
ARHGEF39-203ENST00000475323 CHMP4AQ9BY43 222 aa15.89■□□□□ 0.13
ARHGEF39-203ENST00000475323 ZNF215Q9UL58 517 aaPredicted RBP15.89■□□□□ 0.13
ARHGEF39-203ENST00000475323 JCADQ9P266 1359 aa15.89■□□□□ 0.13
ARHGEF39-203ENST00000475323 UTYO14607 1347 aa15.89■□□□□ 0.13
ARHGEF39-203ENST00000475323 CTDNEP1O95476 244 aa15.89■□□□□ 0.13
ARHGEF39-203ENST00000475323 APOBRQ0VD83 1088 aa15.89■□□□□ 0.13
ARHGEF39-203ENST00000475323 SNW1Q13573 536 aaKnown RBP15.89■□□□□ 0.13
ARHGEF39-203ENST00000475323 SYTL4Q96C24 671 aaPredicted RBP15.89■□□□□ 0.13
ARHGEF39-203ENST00000475323 PAXBP1Q9Y5B6 917 aa15.89■□□□□ 0.13
ARHGEF39-203ENST00000475323 CHST3Q7LGC8 479 aa15.89■□□□□ 0.13
ARHGEF39-203ENST00000475323 MYD88Q99836 296 aa15.89■□□□□ 0.13
ARHGEF39-203ENST00000475323 DBNDD2Q9BQY9 259 aa15.89■□□□□ 0.13
ARHGEF39-203ENST00000475323 DDX21Q9NR30 783 aaKnown RBP eCLIP15.89■□□□□ 0.13
ARHGEF39-203ENST00000475323 OGFRQ9NZT2 677 aa15.89■□□□□ 0.13
ARHGEF39-203ENST00000475323 NEURL1BA8MQ27 555 aa15.88■□□□□ 0.13
ARHGEF39-203ENST00000475323 DHX40Q8IX18 779 aaKnown RBP15.88■□□□□ 0.13
ARHGEF39-203ENST00000475323 FEZ1Q99689 392 aa15.88■□□□□ 0.13
ARHGEF39-203ENST00000475323 CFAP45Q9UL16 551 aa15.88■□□□□ 0.13
ARHGEF39-203ENST00000475323 CCDC69A6NI79 296 aa15.88■□□□□ 0.13
ARHGEF39-203ENST00000475323 BECN2A8MW95 431 aa15.88■□□□□ 0.13
ARHGEF39-203ENST00000475323 NPHP1O15259 732 aa15.88■□□□□ 0.13
ARHGEF39-203ENST00000475323 NSUN7Q8NE18 718 aaKnown RBP15.88■□□□□ 0.13
ARHGEF39-203ENST00000475323 HDAC5Q9UQL6 1122 aa15.88■□□□□ 0.13
ARHGEF39-203ENST00000475323 HEG1Q9ULI3 1381 aa15.87■□□□□ 0.13
ARHGEF39-203ENST00000475323 XAGE3Q8WTP9 111 aa15.87■□□□□ 0.13
ARHGEF39-203ENST00000475323 DDX58O95786 925 aaKnown RBP15.87■□□□□ 0.13
ARHGEF39-203ENST00000475323 CDC25BP30305 580 aa15.87■□□□□ 0.13
ARHGEF39-203ENST00000475323 CCZ1BP86790 482 aa15.87■□□□□ 0.13
ARHGEF39-203ENST00000475323 CCZ1P86791 482 aaPredicted RBP15.87■□□□□ 0.13
ARHGEF39-203ENST00000475323 GCKRQ14397 625 aa15.87■□□□□ 0.13
ARHGEF39-203ENST00000475323 KRT32Q14532 448 aa15.87■□□□□ 0.13
ARHGEF39-203ENST00000475323 STX1AQ16623 288 aa15.87■□□□□ 0.13
ARHGEF39-203ENST00000475323 TNNI3KQ59H18 835 aa15.87■□□□□ 0.13
ARHGEF39-203ENST00000475323 COPS6Q7L5N1 327 aa15.87■□□□□ 0.13
ARHGEF39-203ENST00000475323 ZSCAN16Q9H4T2 348 aaPredicted RBP15.87■□□□□ 0.13
ARHGEF39-203ENST00000475323 DDX41Q9UJV9 622 aaKnown RBP15.87■□□□□ 0.13
ARHGEF39-203ENST00000475323 FPGT-TNNI3KV9GXZ4 949 aa15.87■□□□□ 0.13
ARHGEF39-203ENST00000475323 PTPDC1A2A3K4 754 aa15.86■□□□□ 0.13
ARHGEF39-203ENST00000475323 ATP5JP18859 108 aa15.86■□□□□ 0.13
ARHGEF39-203ENST00000475323 PTPN14Q15678 1187 aa15.86■□□□□ 0.13
ARHGEF39-203ENST00000475323 SARM1Q6SZW1 724 aa15.86■□□□□ 0.13
ARHGEF39-203ENST00000475323 AOPEPQ8N6M6 819 aa15.86■□□□□ 0.13
ARHGEF39-203ENST00000475323 SMARCC2Q8TAQ2 1214 aa15.86■□□□□ 0.13
ARHGEF39-203ENST00000475323 MRFAP1L1Q96HT8 127 aa15.86■□□□□ 0.13
ARHGEF39-203ENST00000475323 RCOR1Q9UKL0 485 aa15.86■□□□□ 0.13
ARHGEF39-203ENST00000475323 PTPN12Q05209 780 aaKnown RBP15.86■□□□□ 0.13
ARHGEF39-203ENST00000475323 KMT5BQ4FZB7 885 aa15.86■□□□□ 0.13
ARHGEF39-203ENST00000475323 ANKARQ7Z5J8 1434 aa15.86■□□□□ 0.13
ARHGEF39-203ENST00000475323 KIF20AO95235 890 aa15.85■□□□□ 0.13
ARHGEF39-203ENST00000475323 GTF2E1P29083 439 aaPredicted RBP15.85■□□□□ 0.13
ARHGEF39-203ENST00000475323 ME1P48163 572 aa15.85■□□□□ 0.13
ARHGEF39-203ENST00000475323 RBM6P78332 1123 aaKnown RBP15.85■□□□□ 0.13
ARHGEF39-203ENST00000475323 PSME1Q06323 249 aa15.85■□□□□ 0.13
ARHGEF39-203ENST00000475323 LMOD2Q6P5Q4 547 aa15.85■□□□□ 0.13
ARHGEF39-203ENST00000475323 NYAP1Q6ZVC0 841 aa15.85■□□□□ 0.13
ARHGEF39-203ENST00000475323 ILDR1Q86SU0 546 aaPredicted RBP15.85■□□□□ 0.13
ARHGEF39-203ENST00000475323 FSIP1Q8NA03 581 aa15.85■□□□□ 0.13
ARHGEF39-203ENST00000475323 CGNQ9P2M7 1197 aaKnown RBP15.85■□□□□ 0.13
ARHGEF39-203ENST00000475323 LMO7Q8WWI1 1683 aa15.85■□□□□ 0.13
ARHGEF39-203ENST00000475323 SYCP1Q15431 976 aa15.85■□□□□ 0.13
ARHGEF39-203ENST00000475323 ZNF771Q7L3S4 317 aaPredicted RBP15.85■□□□□ 0.13
ARHGEF39-203ENST00000475323 KIF18AQ8NI77 898 aa15.85■□□□□ 0.13
ARHGEF39-203ENST00000475323 FER1L4A9Z1Z3 1794 aa15.85■□□□□ 0.13
ARHGEF39-203ENST00000475323 NFAT5O94916 1531 aa15.85■□□□□ 0.13
ARHGEF39-203ENST00000475323 KINO60870 393 aaKnown RBP15.85■□□□□ 0.13
ARHGEF39-203ENST00000475323 MCMDC2Q4G0Z9 681 aa15.85■□□□□ 0.13
ARHGEF39-203ENST00000475323 ESCO1Q5FWF5 840 aa15.85■□□□□ 0.13
ARHGEF39-203ENST00000475323 OTUD7BQ6GQQ9 843 aa15.85■□□□□ 0.13
ARHGEF39-203ENST00000475323 CCDC73Q6ZRK6 1079 aa15.85■□□□□ 0.13
ARHGEF39-203ENST00000475323 UBE3BQ7Z3V4 1068 aa15.85■□□□□ 0.13
ARHGEF39-203ENST00000475323 ENGASEQ8NFI3 743 aa15.85■□□□□ 0.13
ARHGEF39-203ENST00000475323 U3KPZ7 1027 aaPredicted RBP15.85■□□□□ 0.13
ARHGEF39-203ENST00000475323 ATP5J2-PTCD1G3V325 749 aa15.84■□□□□ 0.13
ARHGEF39-203ENST00000475323 PFKFB2O60825 505 aa15.84■□□□□ 0.13
ARHGEF39-203ENST00000475323 PTCD1O75127 700 aaKnown RBP15.84■□□□□ 0.13
ARHGEF39-203ENST00000475323 RFX5P48382 616 aaPredicted RBP15.84■□□□□ 0.13
ARHGEF39-203ENST00000475323 ELF2Q15723 593 aa15.84■□□□□ 0.13
ARHGEF39-203ENST00000475323 AMOTQ4VCS5 1084 aa15.84■□□□□ 0.13
ARHGEF39-203ENST00000475323 AXIN2Q9Y2T1 843 aa15.84■□□□□ 0.13
ARHGEF39-203ENST00000475323 A0A1B0GVL5 298 aa15.84■□□□□ 0.13
ARHGEF39-203ENST00000475323 NEXNQ0ZGT2 675 aa15.84■□□□□ 0.13
ARHGEF39-203ENST00000475323 THEMISQ8N1K5 641 aaPredicted RBP15.84■□□□□ 0.13
ARHGEF39-203ENST00000475323 SLIT1O75093 1534 aa15.83■□□□□ 0.13
ARHGEF39-203ENST00000475323 NBPF11Q86T75 865 aa15.83■□□□□ 0.13
ARHGEF39-203ENST00000475323 CCAR2Q8N163 923 aaKnown RBP15.83■□□□□ 0.13
ARHGEF39-203ENST00000475323 ANKRD24Q8TF21 1146 aa15.83■□□□□ 0.13
ARHGEF39-203ENST00000475323 GPHNQ9NQX3 736 aaPredicted RBP15.83■□□□□ 0.13
ARHGEF39-203ENST00000475323 ERBB3P21860 1342 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms