RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 NWD1Q149M9 1564 aa16.09■□□□□ 0.17
SEMA4D-217ENST00000475255 A0A1B0GVL5 298 aa16.09■□□□□ 0.17
SEMA4D-217ENST00000475255 VGLL3A8MV65 326 aa16.09■□□□□ 0.17
SEMA4D-217ENST00000475255 GIGYF1O75420 1035 aaPredicted RBP16.09■□□□□ 0.17
SEMA4D-217ENST00000475255 ADD1P35611 737 aaKnown RBP16.09■□□□□ 0.17
SEMA4D-217ENST00000475255 LMOD2Q6P5Q4 547 aa16.09■□□□□ 0.17
SEMA4D-217ENST00000475255 MED23Q9ULK4 1368 aa16.09■□□□□ 0.17
SEMA4D-217ENST00000475255 CACNA1FO60840 1977 aa16.08■□□□□ 0.17
SEMA4D-217ENST00000475255 CCDC73Q6ZRK6 1079 aa16.08■□□□□ 0.17
SEMA4D-217ENST00000475255 GPHNQ9NQX3 736 aaPredicted RBP16.08■□□□□ 0.17
SEMA4D-217ENST00000475255 GJB4Q9NTQ9 266 aa16.08■□□□□ 0.17
SEMA4D-217ENST00000475255 KINO60870 393 aaKnown RBP16.08■□□□□ 0.16
SEMA4D-217ENST00000475255 IGKV5-2P06315 115 aa16.08■□□□□ 0.16
SEMA4D-217ENST00000475255 TFCP2Q12800 502 aa16.08■□□□□ 0.16
SEMA4D-217ENST00000475255 STX1AQ16623 288 aa16.08■□□□□ 0.16
SEMA4D-217ENST00000475255 CEMIPQ8WUJ3 1361 aa16.08■□□□□ 0.16
SEMA4D-217ENST00000475255 HIP1O00291 1037 aa16.08■□□□□ 0.16
SEMA4D-217ENST00000475255 ERCC6LQ2NKX8 1250 aa16.08■□□□□ 0.16
SEMA4D-217ENST00000475255 DBNDD2Q9BQY9 259 aa16.08■□□□□ 0.16
SEMA4D-217ENST00000475255 PTPDC1A2A3K4 754 aa16.07■□□□□ 0.16
SEMA4D-217ENST00000475255 LRRC37A3O60309 1634 aa16.07■□□□□ 0.16
SEMA4D-217ENST00000475255 SMC2O95347 1197 aa16.07■□□□□ 0.16
SEMA4D-217ENST00000475255 CTDNEP1O95476 244 aa16.07■□□□□ 0.16
SEMA4D-217ENST00000475255 SNW1Q13573 536 aaKnown RBP16.07■□□□□ 0.16
SEMA4D-217ENST00000475255 SDF4Q9BRK5 362 aa16.07■□□□□ 0.16
SEMA4D-217ENST00000475255 ALDH1L1O75891 902 aa16.07■□□□□ 0.16
SEMA4D-217ENST00000475255 RBM6P78332 1123 aaKnown RBP16.07■□□□□ 0.16
SEMA4D-217ENST00000475255 CCAR2Q8N163 923 aaKnown RBP16.07■□□□□ 0.16
SEMA4D-217ENST00000475255 MYD88Q99836 296 aa16.07■□□□□ 0.16
SEMA4D-217ENST00000475255 CFAP45Q9UL16 551 aa16.07■□□□□ 0.16
SEMA4D-217ENST00000475255 ERBB3P21860 1342 aa16.06■□□□□ 0.16
SEMA4D-217ENST00000475255 SYT10Q6XYQ8 523 aa16.06■□□□□ 0.16
SEMA4D-217ENST00000475255 NYAP1Q6ZVC0 841 aa16.06■□□□□ 0.16
SEMA4D-217ENST00000475255 LINS1Q8NG48 757 aa16.06■□□□□ 0.16
SEMA4D-217ENST00000475255 BABAM1Q9NWV8 329 aa16.06■□□□□ 0.16
SEMA4D-217ENST00000475255 PIK3C2AO00443 1686 aa16.06■□□□□ 0.16
SEMA4D-217ENST00000475255 POLR3DP05423 398 aaPredicted RBP16.06■□□□□ 0.16
SEMA4D-217ENST00000475255 NSUN7Q8NE18 718 aaKnown RBP16.06■□□□□ 0.16
SEMA4D-217ENST00000475255 GOLGA8FQ08AF8 430 aa16.05■□□□□ 0.16
SEMA4D-217ENST00000475255 GOLGA8DPQ0D2H9 430 aa16.05■□□□□ 0.16
SEMA4D-217ENST00000475255 DPCR1Q3MIW9 517 aa16.05■□□□□ 0.16
SEMA4D-217ENST00000475255 TMC6Q7Z403 805 aa16.05■□□□□ 0.16
SEMA4D-217ENST00000475255 ZNF397Q8NF99 534 aaPredicted RBP16.05■□□□□ 0.16
SEMA4D-217ENST00000475255 MORC2Q9Y6X9 1032 aaPredicted RBP16.05■□□□□ 0.16
SEMA4D-217ENST00000475255 ATP5J2-PTCD1G3V325 749 aa16.05■□□□□ 0.16
SEMA4D-217ENST00000475255 PTCD1O75127 700 aaKnown RBP16.05■□□□□ 0.16
SEMA4D-217ENST00000475255 KCNA6P17658 529 aa16.05■□□□□ 0.16
SEMA4D-217ENST00000475255 KRT222Q8N1A0 295 aa16.05■□□□□ 0.16
SEMA4D-217ENST00000475255 ZNF446Q9NWS9 450 aa16.05■□□□□ 0.16
SEMA4D-217ENST00000475255 TOPAZ1Q8N9V7 1692 aa16.05■□□□□ 0.16
SEMA4D-217ENST00000475255 RNMTO43148 476 aaKnown RBP16.05■□□□□ 0.16
SEMA4D-217ENST00000475255 NBPF11Q86T75 865 aa16.05■□□□□ 0.16
SEMA4D-217ENST00000475255 MRFAP1L1Q96HT8 127 aa16.05■□□□□ 0.16
SEMA4D-217ENST00000475255 IFNKQ9P0W0 207 aa16.05■□□□□ 0.16
SEMA4D-217ENST00000475255 CRYBG1Q9Y4K1 1723 aa16.04■□□□□ 0.16
SEMA4D-217ENST00000475255 TERF2Q15554 542 aa16.04■□□□□ 0.16
SEMA4D-217ENST00000475255 C1orf141Q5JVX7 400 aa16.04■□□□□ 0.16
SEMA4D-217ENST00000475255 TMX1Q9H3N1 280 aa16.04■□□□□ 0.16
SEMA4D-217ENST00000475255 ZNF609O15014 1411 aa16.04■□□□□ 0.16
SEMA4D-217ENST00000475255 PDIA4P13667 645 aaKnown RBP16.04■□□□□ 0.16
SEMA4D-217ENST00000475255 XPO4Q9C0E2 1151 aaKnown RBP16.04■□□□□ 0.16
SEMA4D-217ENST00000475255 HMG20BQ9P0W2 317 aa16.04■□□□□ 0.16
SEMA4D-217ENST00000475255 EID1Q9Y6B2 187 aa16.04■□□□□ 0.16
SEMA4D-217ENST00000475255 E4F1Q66K89 784 aaPredicted RBP16.03■□□□□ 0.16
SEMA4D-217ENST00000475255 TTLL5Q6EMB2 1281 aa16.03■□□□□ 0.16
SEMA4D-217ENST00000475255 ILDR1Q86SU0 546 aaPredicted RBP16.03■□□□□ 0.16
SEMA4D-217ENST00000475255 XAGE3Q8WTP9 111 aa16.03■□□□□ 0.16
SEMA4D-217ENST00000475255 NEUROD6Q96NK8 337 aa16.03■□□□□ 0.16
SEMA4D-217ENST00000475255 SARM1Q6SZW1 724 aa16.03■□□□□ 0.16
SEMA4D-217ENST00000475255 UBE3BQ7Z3V4 1068 aa16.03■□□□□ 0.16
SEMA4D-217ENST00000475255 CEP57L1Q8IYX8 460 aa16.03■□□□□ 0.16
SEMA4D-217ENST00000475255 FAM177A1Q8N128 213 aaPredicted RBP16.03■□□□□ 0.16
SEMA4D-217ENST00000475255 RCOR1Q9UKL0 485 aa16.03■□□□□ 0.16
SEMA4D-217ENST00000475255 DIP2BQ9P265 1576 aa16.03■□□□□ 0.16
SEMA4D-217ENST00000475255 CDC25BP30305 580 aa16.03■□□□□ 0.16
SEMA4D-217ENST00000475255 NDUFA8P51970 172 aa16.03■□□□□ 0.16
SEMA4D-217ENST00000475255 COPS6Q7L5N1 327 aa16.03■□□□□ 0.16
SEMA4D-217ENST00000475255 IP6K1Q92551 441 aa16.03■□□□□ 0.16
SEMA4D-217ENST00000475255 EPC1Q9H2F5 836 aa16.03■□□□□ 0.16
SEMA4D-217ENST00000475255 ZSCAN16Q9H4T2 348 aaPredicted RBP16.03■□□□□ 0.16
SEMA4D-217ENST00000475255 ANO10Q9NW15 660 aa16.03■□□□□ 0.16
SEMA4D-217ENST00000475255 PCDHA7Q9UN72 937 aa16.03■□□□□ 0.16
SEMA4D-217ENST00000475255 GOLIM4O00461 696 aa16.02■□□□□ 0.16
SEMA4D-217ENST00000475255 SLU7O95391 586 aaKnown RBP16.02■□□□□ 0.16
SEMA4D-217ENST00000475255 HOXB7P09629 217 aa16.02■□□□□ 0.16
SEMA4D-217ENST00000475255 LMOD1P29536 600 aaPredicted RBP16.02■□□□□ 0.16
SEMA4D-217ENST00000475255 SYCP1Q15431 976 aa16.02■□□□□ 0.16
SEMA4D-217ENST00000475255 HSP90AA4PQ58FG1 418 aa16.02■□□□□ 0.16
SEMA4D-217ENST00000475255 AKAP4Q5JQC9 854 aa16.02■□□□□ 0.16
SEMA4D-217ENST00000475255 TNNI3KQ59H18 835 aa16.02■□□□□ 0.15
SEMA4D-217ENST00000475255 ARMCX5Q6P1M9 558 aa16.02■□□□□ 0.15
SEMA4D-217ENST00000475255 ENGASEQ8NFI3 743 aa16.02■□□□□ 0.15
SEMA4D-217ENST00000475255 FPGT-TNNI3KV9GXZ4 949 aa16.02■□□□□ 0.15
SEMA4D-217ENST00000475255 PXDNQ92626 1479 aa16.01■□□□□ 0.15
SEMA4D-217ENST00000475255 HAND2P61296 217 aa16.01■□□□□ 0.15
SEMA4D-217ENST00000475255 FAM160A1Q05DH4 1040 aa16.01■□□□□ 0.15
SEMA4D-217ENST00000475255 PLEKHO1Q53GL0 409 aaPredicted RBP16.01■□□□□ 0.15
SEMA4D-217ENST00000475255 GABPB1Q06547 395 aaPredicted RBP16.01■□□□□ 0.15
SEMA4D-217ENST00000475255 KRT32Q14532 448 aa16.01■□□□□ 0.15
SEMA4D-217ENST00000475255 SF3A1Q15459 793 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms