RNA–Protein interactions for RNA: ENST00000474888.1

SNRPCP3-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 3, humanhuman

BASIC

Gene SNRPCP3, Length 476 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP3-201ENST00000474888 VDRP11473 427 aa6.72□□□□□ -1.33
SNRPCP3-201ENST00000474888 ZNF24P17028 368 aa6.72□□□□□ -1.33
SNRPCP3-201ENST00000474888 GBP2P32456 591 aaPredicted RBP6.72□□□□□ -1.33
SNRPCP3-201ENST00000474888 CCDC15Q0P6D6 951 aa6.72□□□□□ -1.33
SNRPCP3-201ENST00000474888 DCTN1Q14203 1278 aa6.72□□□□□ -1.33
SNRPCP3-201ENST00000474888 MVPQ14764 893 aaKnown RBP6.72□□□□□ -1.33
SNRPCP3-201ENST00000474888 LONRF2Q1L5Z9 754 aa6.72□□□□□ -1.33
SNRPCP3-201ENST00000474888 CEP85LQ5SZL2 805 aa6.72□□□□□ -1.33
SNRPCP3-201ENST00000474888 CCDC181Q5TID7 509 aa6.72□□□□□ -1.33
SNRPCP3-201ENST00000474888 MYSM1Q5VVJ2 828 aa6.72□□□□□ -1.33
SNRPCP3-201ENST00000474888 ZKSCAN2Q63HK3 967 aa6.72□□□□□ -1.33
SNRPCP3-201ENST00000474888 CAPRIN2Q6IMN6 1127 aaKnown RBP6.72□□□□□ -1.33
SNRPCP3-201ENST00000474888 SARM1Q6SZW1 724 aa6.72□□□□□ -1.33
SNRPCP3-201ENST00000474888 MTHFD1LQ6UB35 978 aa6.72□□□□□ -1.33
SNRPCP3-201ENST00000474888 GET4Q7L5D6 327 aaPredicted RBP6.72□□□□□ -1.33
SNRPCP3-201ENST00000474888 IQCF2Q8IXL9 164 aa6.72□□□□□ -1.33
SNRPCP3-201ENST00000474888 CNNM3Q8NE01 707 aa6.72□□□□□ -1.33
SNRPCP3-201ENST00000474888 TRIM58Q8NG06 486 aa6.72□□□□□ -1.33
SNRPCP3-201ENST00000474888 NUP133Q8WUM0 1156 aa6.72□□□□□ -1.33
SNRPCP3-201ENST00000474888 LMBR1Q8WVP7 490 aa6.72□□□□□ -1.33
SNRPCP3-201ENST00000474888 LZICQ8WZA0 190 aa6.72□□□□□ -1.33
SNRPCP3-201ENST00000474888 ARHGAP45Q92619 1136 aa6.72□□□□□ -1.33
SNRPCP3-201ENST00000474888 BHMTQ93088 406 aa6.72□□□□□ -1.33
SNRPCP3-201ENST00000474888 RBM42Q9BTD8 480 aaKnown RBP6.72□□□□□ -1.33
SNRPCP3-201ENST00000474888 TSGA10Q9BZW7 698 aa6.72□□□□□ -1.33
SNRPCP3-201ENST00000474888 TRIM5Q9C035 493 aa6.72□□□□□ -1.33
SNRPCP3-201ENST00000474888 MMADHCQ9H3L0 296 aaPredicted RBP6.72□□□□□ -1.33
SNRPCP3-201ENST00000474888 IMPACTQ9P2X3 320 aa6.72□□□□□ -1.33
SNRPCP3-201ENST00000474888 ITGB1BP2Q9UKP3 347 aa6.72□□□□□ -1.33
SNRPCP3-201ENST00000474888 THRAP3Q9Y2W1 955 aaKnown RBP6.72□□□□□ -1.33
SNRPCP3-201ENST00000474888 ATP6V1DQ9Y5K8 247 aa6.72□□□□□ -1.33
SNRPCP3-201ENST00000474888 CAPN7Q9Y6W3 813 aa6.72□□□□□ -1.33
SNRPCP3-201ENST00000474888 FHOD3Q2V2M9 1422 aa6.72□□□□□ -1.33
SNRPCP3-201ENST00000474888 UHRF1BP1Q6BDS2 1440 aa6.72□□□□□ -1.33
SNRPCP3-201ENST00000474888 SYNMO15061 1565 aa6.72□□□□□ -1.33
SNRPCP3-201ENST00000474888 MBD5Q9P267 1494 aa6.72□□□□□ -1.33
SNRPCP3-201ENST00000474888 RPAP1Q9BWH6 1393 aaPredicted RBP6.71□□□□□ -1.33
SNRPCP3-201ENST00000474888 SHTN1A0MZ66 631 aa6.71□□□□□ -1.34
SNRPCP3-201ENST00000474888 SHOX2O60902 331 aaPredicted RBP6.71□□□□□ -1.34
SNRPCP3-201ENST00000474888 KIAA0754O94854 1291 aa6.71□□□□□ -1.34
SNRPCP3-201ENST00000474888 FCHSD2O94868 740 aa6.71□□□□□ -1.34
SNRPCP3-201ENST00000474888 HARSP12081 509 aaKnown RBP6.71□□□□□ -1.34
SNRPCP3-201ENST00000474888 USP5P45974 858 aa6.71□□□□□ -1.34
SNRPCP3-201ENST00000474888 PAPOLAP51003 745 aaKnown RBP6.71□□□□□ -1.34
SNRPCP3-201ENST00000474888 EVCP57679 992 aa6.71□□□□□ -1.34
SNRPCP3-201ENST00000474888 ZBED6P86452 979 aa6.71□□□□□ -1.34
SNRPCP3-201ENST00000474888 CUL4AQ13619 759 aa6.71□□□□□ -1.34
SNRPCP3-201ENST00000474888 KCNB1Q14721 858 aa6.71□□□□□ -1.34
SNRPCP3-201ENST00000474888 SNCBQ16143 134 aa6.71□□□□□ -1.34
SNRPCP3-201ENST00000474888 KIF4BQ2VIQ3 1234 aa6.71□□□□□ -1.34
SNRPCP3-201ENST00000474888 SLC4A8Q2Y0W8 1093 aa6.71□□□□□ -1.34
SNRPCP3-201ENST00000474888 PUS10Q3MIT2 529 aaKnown RBP6.71□□□□□ -1.34
SNRPCP3-201ENST00000474888 KBTBD12Q3ZCT8 623 aa6.71□□□□□ -1.34
SNRPCP3-201ENST00000474888 SFMBT2Q5VUG0 894 aa6.71□□□□□ -1.34
SNRPCP3-201ENST00000474888 RSRC2Q7L4I2 434 aaKnown RBP6.71□□□□□ -1.34
SNRPCP3-201ENST00000474888 MYOCDQ8IZQ8 938 aa6.71□□□□□ -1.34
SNRPCP3-201ENST00000474888 GBP7Q8N8V2 638 aaPredicted RBP6.71□□□□□ -1.34
SNRPCP3-201ENST00000474888 AFAP1L1Q8TED9 768 aa6.71□□□□□ -1.34
SNRPCP3-201ENST00000474888 CCDC47Q96A33 483 aaKnown RBP6.71□□□□□ -1.34
SNRPCP3-201ENST00000474888 JAKMIP2Q96AA8 810 aa6.71□□□□□ -1.34
SNRPCP3-201ENST00000474888 RBM41Q96IZ5 413 aaKnown RBP6.71□□□□□ -1.34
SNRPCP3-201ENST00000474888 USP26Q9BXU7 913 aa6.71□□□□□ -1.34
SNRPCP3-201ENST00000474888 CD248Q9HCU0 757 aa6.71□□□□□ -1.34
SNRPCP3-201ENST00000474888 SPATA7Q9P0W8 599 aa6.71□□□□□ -1.34
SNRPCP3-201ENST00000474888 GGA2Q9UJY4 613 aa6.71□□□□□ -1.34
SNRPCP3-201ENST00000474888 ATP8A1Q9Y2Q0 1164 aa6.71□□□□□ -1.34
SNRPCP3-201ENST00000474888 PCDHGC5Q9Y5F6 944 aa6.71□□□□□ -1.34
SNRPCP3-201ENST00000474888 KIF14Q15058 1648 aa6.71□□□□□ -1.34
SNRPCP3-201ENST00000474888 GCC2Q8IWJ2 1684 aa6.71□□□□□ -1.34
SNRPCP3-201ENST00000474888 FAM135AQ9P2D6 1515 aa6.71□□□□□ -1.34
SNRPCP3-201ENST00000474888 PTPRKQ15262 1439 aa6.7□□□□□ -1.34
SNRPCP3-201ENST00000474888 SPDYE3A6NKU9 549 aa6.7□□□□□ -1.34
SNRPCP3-201ENST00000474888 KIF3BO15066 747 aa6.7□□□□□ -1.34
SNRPCP3-201ENST00000474888 GADD45BO75293 160 aaPredicted RBP6.7□□□□□ -1.34
SNRPCP3-201ENST00000474888 RASSF9O75901 435 aa6.7□□□□□ -1.34
SNRPCP3-201ENST00000474888 TXLNAP40222 546 aa6.7□□□□□ -1.34
SNRPCP3-201ENST00000474888 ETF1P62495 437 aaKnown RBP6.7□□□□□ -1.34
SNRPCP3-201ENST00000474888 IFT88Q13099 833 aa6.7□□□□□ -1.34
SNRPCP3-201ENST00000474888 DYNC1I2Q13409 638 aaKnown RBP6.7□□□□□ -1.34
SNRPCP3-201ENST00000474888 TUBB2AQ13885 445 aa6.7□□□□□ -1.34
SNRPCP3-201ENST00000474888 POSTNQ15063 836 aa6.7□□□□□ -1.34
SNRPCP3-201ENST00000474888 DPY19L2Q6NUT2 758 aa6.7□□□□□ -1.34
SNRPCP3-201ENST00000474888 MIS18BP1Q6P0N0 1132 aa6.7□□□□□ -1.34
SNRPCP3-201ENST00000474888 C16orf87Q6PH81 154 aa6.7□□□□□ -1.34
SNRPCP3-201ENST00000474888 TBC1D9Q6ZT07 1266 aa6.7□□□□□ -1.34
SNRPCP3-201ENST00000474888 CACTIN-AS1Q8N1I8 211 aa6.7□□□□□ -1.34
SNRPCP3-201ENST00000474888 ZGPATQ8N5A5 531 aaKnown RBP6.7□□□□□ -1.34
SNRPCP3-201ENST00000474888 CCDC150Q8NCX0 1101 aa6.7□□□□□ -1.34
SNRPCP3-201ENST00000474888 CCDC102AQ96A19 550 aa6.7□□□□□ -1.34
SNRPCP3-201ENST00000474888 FAM163AQ96GL9 167 aaPredicted RBP6.7□□□□□ -1.34
SNRPCP3-201ENST00000474888 MPHOSPH8Q99549 860 aa6.7□□□□□ -1.34
SNRPCP3-201ENST00000474888 EPAS1Q99814 870 aa6.7□□□□□ -1.34
SNRPCP3-201ENST00000474888 GORASP1Q9BQQ3 440 aa6.7□□□□□ -1.34
SNRPCP3-201ENST00000474888 PAGR1Q9BTK6 254 aa6.7□□□□□ -1.34
SNRPCP3-201ENST00000474888 TUBB2BQ9BVA1 445 aa6.7□□□□□ -1.34
SNRPCP3-201ENST00000474888 YIPF2Q9BWQ6 316 aa6.7□□□□□ -1.34
SNRPCP3-201ENST00000474888 PARD6BQ9BYG5 372 aa6.7□□□□□ -1.34
SNRPCP3-201ENST00000474888 TRIM4Q9C037 500 aa6.7□□□□□ -1.34
SNRPCP3-201ENST00000474888 VIPAS39Q9H9C1 493 aa6.7□□□□□ -1.34
SNRPCP3-201ENST00000474888 PDE11AQ9HCR9 933 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms