RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 LAMB4A4D0S4 1761 aa25.26■■□□□ 1.63
SH3D21-202ENST00000474766 COL23A1Q86Y22 540 aaPredicted RBP25.25■■□□□ 1.63
SH3D21-202ENST00000474766 SUCLG2Q96I99 432 aa25.25■■□□□ 1.63
SH3D21-202ENST00000474766 GTPBP4Q9BZE4 634 aaKnown RBP25.25■■□□□ 1.63
SH3D21-202ENST00000474766 ZSCAN20P17040 1043 aaPredicted RBP25.25■■□□□ 1.63
SH3D21-202ENST00000474766 ECHDC1Q9NTX5 307 aa25.25■■□□□ 1.63
SH3D21-202ENST00000474766 CHAMP1Q96JM3 812 aa25.24■■□□□ 1.63
SH3D21-202ENST00000474766 PA2G4Q9UQ80 394 aaKnown RBP25.24■■□□□ 1.63
SH3D21-202ENST00000474766 C4AP0C0L4 1744 aa25.24■■□□□ 1.63
SH3D21-202ENST00000474766 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.24■■□□□ 1.63
SH3D21-202ENST00000474766 IGKV5-2P06315 115 aa25.24■■□□□ 1.63
SH3D21-202ENST00000474766 CCDC87Q9NVE4 849 aa25.24■■□□□ 1.63
SH3D21-202ENST00000474766 WDR33Q9C0J8 1336 aaKnown RBP25.23■■□□□ 1.63
SH3D21-202ENST00000474766 ZNF710Q8N1W2 664 aa25.23■■□□□ 1.63
SH3D21-202ENST00000474766 UPF3BQ9BZI7 483 aaKnown RBP25.23■■□□□ 1.63
SH3D21-202ENST00000474766 AIMP1Q12904 312 aaKnown RBP25.22■■□□□ 1.63
SH3D21-202ENST00000474766 CCDC183Q5T5S1 534 aa25.22■■□□□ 1.63
SH3D21-202ENST00000474766 TEX13AQ9BXU3 409 aaPredicted RBP25.22■■□□□ 1.63
SH3D21-202ENST00000474766 BICC1Q9H694 974 aaKnown RBP25.22■■□□□ 1.63
SH3D21-202ENST00000474766 ZBTB1Q9Y2K1 713 aa25.22■■□□□ 1.63
SH3D21-202ENST00000474766 ZBTB7AO95365 584 aa25.22■■□□□ 1.63
SH3D21-202ENST00000474766 GPATCH3Q96I76 525 aa25.22■■□□□ 1.63
SH3D21-202ENST00000474766 KIF3AQ9Y496 699 aa25.22■■□□□ 1.63
SH3D21-202ENST00000474766 SNX14Q9Y5W7 946 aa25.22■■□□□ 1.63
SH3D21-202ENST00000474766 RPS6KA4O75676 772 aa25.21■■□□□ 1.63
SH3D21-202ENST00000474766 RIC3Q7Z5B4 369 aa25.21■■□□□ 1.63
SH3D21-202ENST00000474766 RTCBQ9Y3I0 505 aaKnown RBP25.21■■□□□ 1.63
SH3D21-202ENST00000474766 STARD3NLO95772 234 aa25.2■■□□□ 1.63
SH3D21-202ENST00000474766 IFIT2P09913 472 aaKnown RBP25.2■■□□□ 1.63
SH3D21-202ENST00000474766 LRP10Q7Z4F1 713 aa25.2■■□□□ 1.63
SH3D21-202ENST00000474766 SASH1O94885 1247 aa25.2■■□□□ 1.62
SH3D21-202ENST00000474766 TPM3P06753 285 aa25.2■■□□□ 1.62
SH3D21-202ENST00000474766 FOXD4L5Q5VV16 416 aaPredicted RBP25.2■■□□□ 1.62
SH3D21-202ENST00000474766 CWC27Q6UX04 472 aaKnown RBP25.2■■□□□ 1.62
SH3D21-202ENST00000474766 FOXD4L4Q8WXT5 416 aaPredicted RBP25.2■■□□□ 1.62
SH3D21-202ENST00000474766 NEURL1BA8MQ27 555 aa25.19■■□□□ 1.62
SH3D21-202ENST00000474766 A1BGP04217 495 aa25.19■■□□□ 1.62
SH3D21-202ENST00000474766 LRP5O75197 1615 aa25.19■■□□□ 1.62
SH3D21-202ENST00000474766 FLAD1Q8NFF5 587 aa25.19■■□□□ 1.62
SH3D21-202ENST00000474766 XAGE3Q8WTP9 111 aa25.19■■□□□ 1.62
SH3D21-202ENST00000474766 RUFY2Q8WXA3 655 aa25.19■■□□□ 1.62
SH3D21-202ENST00000474766 TTC14Q96N46 770 aa25.19■■□□□ 1.62
SH3D21-202ENST00000474766 METTL22Q9BUU2 404 aaPredicted RBP25.19■■□□□ 1.62
SH3D21-202ENST00000474766 COL24A1Q17RW2 1714 aa25.18■■□□□ 1.62
SH3D21-202ENST00000474766 NEXNQ0ZGT2 675 aa25.18■■□□□ 1.62
SH3D21-202ENST00000474766 USP48Q86UV5 1035 aa25.18■■□□□ 1.62
SH3D21-202ENST00000474766 AACSQ86V21 672 aa25.18■■□□□ 1.62
SH3D21-202ENST00000474766 DIAPH3Q9NSV4 1193 aa25.18■■□□□ 1.62
SH3D21-202ENST00000474766 KIF20AO95235 890 aa25.17■■□□□ 1.62
SH3D21-202ENST00000474766 PIP4K2AP48426 406 aaPredicted RBP25.17■■□□□ 1.62
SH3D21-202ENST00000474766 G3BP1Q13283 466 aaKnown RBP eCLIP25.17■■□□□ 1.62
SH3D21-202ENST00000474766 GCKRQ14397 625 aa25.17■■□□□ 1.62
SH3D21-202ENST00000474766 COPS6Q7L5N1 327 aa25.17■■□□□ 1.62
SH3D21-202ENST00000474766 RASEFQ8IZ41 740 aa25.17■■□□□ 1.62
SH3D21-202ENST00000474766 EVI5LQ96CN4 794 aa25.17■■□□□ 1.62
SH3D21-202ENST00000474766 NBPF26B4DH59 902 aa25.17■■□□□ 1.62
SH3D21-202ENST00000474766 ADCY5O95622 1261 aa25.17■■□□□ 1.62
SH3D21-202ENST00000474766 NBPF10Q6P3W6 841 aaKnown RBP25.17■■□□□ 1.62
SH3D21-202ENST00000474766 NBPF15Q8N660 670 aa25.17■■□□□ 1.62
SH3D21-202ENST00000474766 ARHGEF1Q92888 912 aaKnown RBP25.17■■□□□ 1.62
SH3D21-202ENST00000474766 ATF5Q9Y2D1 282 aaPredicted RBP25.17■■□□□ 1.62
SH3D21-202ENST00000474766 MYL6BP14649 208 aa25.16■■□□□ 1.62
SH3D21-202ENST00000474766 NOL8Q76FK4 1167 aaKnown RBP25.16■■□□□ 1.62
SH3D21-202ENST00000474766 EAF2Q96CJ1 260 aaPredicted RBP25.16■■□□□ 1.62
SH3D21-202ENST00000474766 MTFR1LQ9H019 292 aa25.16■■□□□ 1.62
SH3D21-202ENST00000474766 USP25Q9UHP3 1055 aa25.16■■□□□ 1.62
SH3D21-202ENST00000474766 GADD45BO75293 160 aaPredicted RBP25.15■■□□□ 1.62
SH3D21-202ENST00000474766 TRAPPC3LQ5T215 181 aa25.15■■□□□ 1.62
SH3D21-202ENST00000474766 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.15■■□□□ 1.62
SH3D21-202ENST00000474766 ADRA2BP18089 450 aa25.15■■□□□ 1.62
SH3D21-202ENST00000474766 SLC16A10Q8TF71 515 aa25.15■■□□□ 1.62
SH3D21-202ENST00000474766 KCNB2Q92953 911 aa25.15■■□□□ 1.62
SH3D21-202ENST00000474766 PRDM10Q9NQV6 1147 aa25.15■■□□□ 1.62
SH3D21-202ENST00000474766 RPAP1Q9BWH6 1393 aaPredicted RBP25.15■■□□□ 1.62
SH3D21-202ENST00000474766 ANKRD13DQ6ZTN6 518 aa25.14■■□□□ 1.62
SH3D21-202ENST00000474766 COL15A1P39059 1388 aa25.14■■□□□ 1.62
SH3D21-202ENST00000474766 KDM4AO75164 1064 aa25.13■■□□□ 1.61
SH3D21-202ENST00000474766 ARID3AQ99856 593 aa25.13■■□□□ 1.61
SH3D21-202ENST00000474766 MSL1Q68DK7 614 aa25.13■■□□□ 1.61
SH3D21-202ENST00000474766 MYD88Q99836 296 aa25.13■■□□□ 1.61
SH3D21-202ENST00000474766 SPON1Q9HCB6 807 aa25.13■■□□□ 1.61
SH3D21-202ENST00000474766 EIF5P55010 431 aaKnown RBP25.12■■□□□ 1.61
SH3D21-202ENST00000474766 UBE2HP62256 183 aa25.12■■□□□ 1.61
SH3D21-202ENST00000474766 PTGER2P43116 358 aa25.12■■□□□ 1.61
SH3D21-202ENST00000474766 PTH1RQ03431 593 aa25.12■■□□□ 1.61
SH3D21-202ENST00000474766 SNRKQ9NRH2 765 aa25.12■■□□□ 1.61
SH3D21-202ENST00000474766 EPHA10Q5JZY3 1008 aa25.11■■□□□ 1.61
SH3D21-202ENST00000474766 SGIP1Q9BQI5 828 aa25.11■■□□□ 1.61
SH3D21-202ENST00000474766 TTC12Q9H892 705 aaPredicted RBP25.11■■□□□ 1.61
SH3D21-202ENST00000474766 SRP68Q9UHB9 627 aaKnown RBP25.11■■□□□ 1.61
SH3D21-202ENST00000474766 HIP1O00291 1037 aa25.1■■□□□ 1.61
SH3D21-202ENST00000474766 RFC4P35249 363 aa25.1■■□□□ 1.61
SH3D21-202ENST00000474766 AK2P54819 239 aa25.1■■□□□ 1.61
SH3D21-202ENST00000474766 CHAF1AQ13111 956 aaPredicted RBP25.1■■□□□ 1.61
SH3D21-202ENST00000474766 PPP4R3BQ5MIZ7 849 aa25.1■■□□□ 1.61
SH3D21-202ENST00000474766 RUFY3Q7L099 469 aa25.1■■□□□ 1.61
SH3D21-202ENST00000474766 KIAA1524Q8TCG1 905 aa25.1■■□□□ 1.61
SH3D21-202ENST00000474766 ZNF830Q96NB3 372 aaPredicted RBP25.1■■□□□ 1.61
SH3D21-202ENST00000474766 TM6SF1Q9BZW5 370 aa25.1■■□□□ 1.61
SH3D21-202ENST00000474766 BCL2L12Q9HB09 334 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms