RNA–Protein interactions for RNA: ENST00000474734.5

CACFD1-204, Transcript of calcium channel flower domain containing 1, humanhuman

TSL 2

Gene CACFD1, Length 689 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-204ENST00000474734 PLA2G12BQ9BX93 195 aa23.17■■□□□ 1.3
CACFD1-204ENST00000474734 GNAI2P04899 355 aa23.16■■□□□ 1.3
CACFD1-204ENST00000474734 CC2D2BQ6DHV5 1058 aa23.16■■□□□ 1.3
CACFD1-204ENST00000474734 ZBTB40Q9NUA8 1239 aa23.16■■□□□ 1.3
CACFD1-204ENST00000474734 PDE8AO60658 829 aa23.15■■□□□ 1.3
CACFD1-204ENST00000474734 PNMA8AQ86V59 439 aaPredicted RBP23.15■■□□□ 1.3
CACFD1-204ENST00000474734 GPC2Q8N158 579 aa23.15■■□□□ 1.3
CACFD1-204ENST00000474734 JARID2Q92833 1246 aaPredicted RBP23.15■■□□□ 1.3
CACFD1-204ENST00000474734 CNTNAP1P78357 1384 aa23.14■■□□□ 1.3
CACFD1-204ENST00000474734 DDX60Q8IY21 1712 aaKnown RBP23.14■■□□□ 1.3
CACFD1-204ENST00000474734 TMEM88BA6NKF7 163 aa23.14■■□□□ 1.29
CACFD1-204ENST00000474734 ITGBL1O95965 494 aaPredicted RBP23.14■■□□□ 1.29
CACFD1-204ENST00000474734 IRX6P78412 446 aaPredicted RBP23.14■■□□□ 1.29
CACFD1-204ENST00000474734 RBM17Q96I25 401 aaKnown RBP23.14■■□□□ 1.29
CACFD1-204ENST00000474734 SUCLG2Q96I99 432 aa23.14■■□□□ 1.29
CACFD1-204ENST00000474734 HCLS1P14317 486 aaPredicted RBP23.13■■□□□ 1.29
CACFD1-204ENST00000474734 EIF6P56537 245 aaKnown RBP23.13■■□□□ 1.29
CACFD1-204ENST00000474734 NLRP3Q96P20 1036 aa23.13■■□□□ 1.29
CACFD1-204ENST00000474734 LRRFIP2Q9Y608 721 aaKnown RBP23.13■■□□□ 1.29
CACFD1-204ENST00000474734 GJA3Q9Y6H8 435 aa23.13■■□□□ 1.29
CACFD1-204ENST00000474734 COL4A5P29400 1685 aa23.13■■□□□ 1.29
CACFD1-204ENST00000474734 MYH3P11055 1940 aa23.12■■□□□ 1.29
CACFD1-204ENST00000474734 EXOC6Q8TAG9 804 aa23.12■■□□□ 1.29
CACFD1-204ENST00000474734 CRAMP1Q96RY5 1269 aa23.12■■□□□ 1.29
CACFD1-204ENST00000474734 CTSWP56202 376 aa23.11■■□□□ 1.29
CACFD1-204ENST00000474734 GRIPAP1Q4V328 841 aa23.11■■□□□ 1.29
CACFD1-204ENST00000474734 MAP1SQ66K74 1059 aaPredicted RBP23.11■■□□□ 1.29
CACFD1-204ENST00000474734 CNTROBQ8N137 903 aa23.11■■□□□ 1.29
CACFD1-204ENST00000474734 LARGE2Q8N3Y3 721 aa23.11■■□□□ 1.29
CACFD1-204ENST00000474734 PPEF1O14829 653 aaPredicted RBP23.1■■□□□ 1.29
CACFD1-204ENST00000474734 RABL6Q3YEC7 729 aaPredicted RBP23.1■■□□□ 1.29
CACFD1-204ENST00000474734 BICC1Q9H694 974 aaKnown RBP23.1■■□□□ 1.29
CACFD1-204ENST00000474734 LMOD1P29536 600 aaPredicted RBP23.09■■□□□ 1.29
CACFD1-204ENST00000474734 VEGFBP49765 207 aa23.09■■□□□ 1.29
CACFD1-204ENST00000474734 SF3B3Q15393 1217 aaKnown RBP23.09■■□□□ 1.29
CACFD1-204ENST00000474734 CCDC152Q4G0S7 254 aa23.09■■□□□ 1.29
CACFD1-204ENST00000474734 KAZALD1Q96I82 304 aa23.09■■□□□ 1.29
CACFD1-204ENST00000474734 TMX4Q9H1E5 349 aaPredicted RBP23.09■■□□□ 1.29
CACFD1-204ENST00000474734 FOXO4P98177 505 aa23.08■■□□□ 1.29
CACFD1-204ENST00000474734 C1orf115Q9H7X2 142 aa23.08■■□□□ 1.29
CACFD1-204ENST00000474734 ADAMTSL1Q8N6G6 1762 aa23.08■■□□□ 1.29
CACFD1-204ENST00000474734 RTL9Q8NET4 1388 aa23.07■■□□□ 1.28
CACFD1-204ENST00000474734 FOXN1O15353 648 aa23.07■■□□□ 1.28
CACFD1-204ENST00000474734 CSF1RP07333 972 aa23.07■■□□□ 1.28
CACFD1-204ENST00000474734 MTX1Q13505 466 aa23.07■■□□□ 1.28
CACFD1-204ENST00000474734 EPHA10Q5JZY3 1008 aa23.07■■□□□ 1.28
CACFD1-204ENST00000474734 ERICH6BQ5W0A0 696 aa23.07■■□□□ 1.28
CACFD1-204ENST00000474734 ANKRD44Q8N8A2 993 aa23.07■■□□□ 1.28
CACFD1-204ENST00000474734 TTLL11Q8NHH1 800 aa23.07■■□□□ 1.28
CACFD1-204ENST00000474734 AIDAQ96BJ3 306 aa23.07■■□□□ 1.28
CACFD1-204ENST00000474734 LMBR1LQ6UX01 489 aa23.06■■□□□ 1.28
CACFD1-204ENST00000474734 RPAP2Q8IXW5 612 aaPredicted RBP23.06■■□□□ 1.28
CACFD1-204ENST00000474734 NIM1KQ8IY84 436 aa23.05■■□□□ 1.28
CACFD1-204ENST00000474734 CHMP3Q9Y3E7 222 aa23.05■■□□□ 1.28
CACFD1-204ENST00000474734 PPIP5K2O43314 1243 aa23.04■■□□□ 1.28
CACFD1-204ENST00000474734 EPS15P42566 896 aa23.04■■□□□ 1.28
CACFD1-204ENST00000474734 DEFB115Q30KQ5 88 aa23.04■■□□□ 1.28
CACFD1-204ENST00000474734 CEP85Q6P2H3 762 aa23.04■■□□□ 1.28
CACFD1-204ENST00000474734 ATP6V0A2Q9Y487 856 aa23.04■■□□□ 1.28
CACFD1-204ENST00000474734 HMMRO75330 724 aa23.03■■□□□ 1.28
CACFD1-204ENST00000474734 SCNN1DP51172 638 aa23.03■■□□□ 1.28
CACFD1-204ENST00000474734 ATP8B2P98198 1209 aa23.03■■□□□ 1.28
CACFD1-204ENST00000474734 CCDC57Q2TAC2 916 aa23.03■■□□□ 1.28
CACFD1-204ENST00000474734 DDX46Q7L014 1031 aaKnown RBP23.03■■□□□ 1.28
CACFD1-204ENST00000474734 ABT1Q9ULW3 272 aaKnown RBP23.03■■□□□ 1.28
CACFD1-204ENST00000474734 RASSF10A6NK89 507 aa23.02■■□□□ 1.28
CACFD1-204ENST00000474734 SRGAP3O43295 1099 aa23.02■■□□□ 1.28
CACFD1-204ENST00000474734 CTCFP49711 727 aaPredicted RBP23.02■■□□□ 1.28
CACFD1-204ENST00000474734 IFIT5Q13325 482 aaKnown RBP23.02■■□□□ 1.28
CACFD1-204ENST00000474734 AOC3Q16853 763 aa23.02■■□□□ 1.28
CACFD1-204ENST00000474734 FAM161AQ3B820 660 aa23.02■■□□□ 1.28
CACFD1-204ENST00000474734 CDC5LQ99459 802 aaKnown RBP23.02■■□□□ 1.28
CACFD1-204ENST00000474734 GREM2Q9H772 168 aa23.02■■□□□ 1.28
CACFD1-204ENST00000474734 ANKRD18BA2A2Z9 1011 aa23.01■■□□□ 1.27
CACFD1-204ENST00000474734 LTBP1Q14766 1721 aa23■■□□□ 1.27
CACFD1-204ENST00000474734 ITGA6P23229 1130 aa23■■□□□ 1.27
CACFD1-204ENST00000474734 SUPT20HQ8NEM7 779 aa23■■□□□ 1.27
CACFD1-204ENST00000474734 CCDC85AQ96PX6 553 aaPredicted RBP23■■□□□ 1.27
CACFD1-204ENST00000474734 PRDM10Q9NQV6 1147 aa23■■□□□ 1.27
CACFD1-204ENST00000474734 WBP1LQ9NX94 342 aa23■■□□□ 1.27
CACFD1-204ENST00000474734 TAF7LQ5H9L4 462 aa22.99■■□□□ 1.27
CACFD1-204ENST00000474734 USP50Q70EL3 339 aaPredicted RBP22.99■■□□□ 1.27
CACFD1-204ENST00000474734 SSH3Q8TE77 659 aa22.99■■□□□ 1.27
CACFD1-204ENST00000474734 VPS33BQ9H267 617 aa22.99■■□□□ 1.27
CACFD1-204ENST00000474734 PCDHB15Q9Y5E8 787 aa22.99■■□□□ 1.27
CACFD1-204ENST00000474734 PNMA6EA0A0J9YXQ4 647 aa22.98■■□□□ 1.27
CACFD1-204ENST00000474734 BBOX1O75936 387 aa22.98■■□□□ 1.27
CACFD1-204ENST00000474734 POLA2Q14181 598 aa22.98■■□□□ 1.27
CACFD1-204ENST00000474734 DPP8Q6V1X1 898 aaPredicted RBP22.98■■□□□ 1.27
CACFD1-204ENST00000474734 RTFDC1Q9BY42 306 aaPredicted RBP22.98■■□□□ 1.27
CACFD1-204ENST00000474734 WDR33Q9C0J8 1336 aaKnown RBP22.98■■□□□ 1.27
CACFD1-204ENST00000474734 FMR1Q06787 632 aaKnown RBP eCLIP22.97■■□□□ 1.27
CACFD1-204ENST00000474734 GRAPQ13588 217 aa22.97■■□□□ 1.27
CACFD1-204ENST00000474734 SP8Q8IXZ3 490 aa22.97■■□□□ 1.27
CACFD1-204ENST00000474734 GRAPLQ8TC17 118 aaPredicted RBP22.97■■□□□ 1.27
CACFD1-204ENST00000474734 ZNRF3Q9ULT6 936 aa22.97■■□□□ 1.27
CACFD1-204ENST00000474734 IGHMBP2P38935 993 aaKnown RBP22.96■■□□□ 1.27
CACFD1-204ENST00000474734 LBX1P52954 281 aa22.96■■□□□ 1.27
CACFD1-204ENST00000474734 CXCL9Q07325 125 aa22.96■■□□□ 1.27
CACFD1-204ENST00000474734 PAXIP1Q6ZW49 1069 aaPredicted RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms