RNA–Protein interactions for RNA: ENST00000473978.5

PCYT1A-214, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 1 (best)

Gene PCYT1A, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-214ENST00000473978 RSPH6AQ9H0K4 717 aa16.96■□□□□ 0.3
PCYT1A-214ENST00000473978 POLLQ9UGP5 575 aa16.96■□□□□ 0.3
PCYT1A-214ENST00000473978 NSFL1CQ9UNZ2 370 aaKnown RBP16.96■□□□□ 0.3
PCYT1A-214ENST00000473978 LRRC37AA6NMS7 1700 aa16.95■□□□□ 0.3
PCYT1A-214ENST00000473978 C6orf229H3BNL8 230 aa16.95■□□□□ 0.3
PCYT1A-214ENST00000473978 HSPA5P11021 654 aaKnown RBP16.95■□□□□ 0.3
PCYT1A-214ENST00000473978 TAF7Q15545 349 aaPredicted RBP16.95■□□□□ 0.3
PCYT1A-214ENST00000473978 PCGF6Q9BYE7 350 aa16.95■□□□□ 0.3
PCYT1A-214ENST00000473978 PTPN22Q9Y2R2 807 aa16.95■□□□□ 0.3
PCYT1A-214ENST00000473978 TTLL12Q14166 644 aaPredicted RBP16.94■□□□□ 0.3
PCYT1A-214ENST00000473978 CHRDL2Q6WN34 429 aa16.94■□□□□ 0.3
PCYT1A-214ENST00000473978 TMC4Q7Z404 712 aa16.94■□□□□ 0.3
PCYT1A-214ENST00000473978 SCN9AQ15858 1988 aa16.94■□□□□ 0.3
PCYT1A-214ENST00000473978 PITPNM2Q9BZ72 1349 aa16.94■□□□□ 0.3
PCYT1A-214ENST00000473978 CC2D1BQ5T0F9 858 aaKnown RBP16.93■□□□□ 0.3
PCYT1A-214ENST00000473978 ALDH1A1P00352 501 aa16.92■□□□□ 0.3
PCYT1A-214ENST00000473978 GPSM2P81274 684 aa16.92■□□□□ 0.3
PCYT1A-214ENST00000473978 RBM27Q9P2N5 1060 aaKnown RBP16.92■□□□□ 0.3
PCYT1A-214ENST00000473978 UNC80Q8N2C7 3258 aa16.92■□□□□ 0.3
PCYT1A-214ENST00000473978 EIF4G2P78344 907 aaKnown RBP eCLIP16.91■□□□□ 0.3
PCYT1A-214ENST00000473978 PTPN12Q05209 780 aaKnown RBP16.91■□□□□ 0.3
PCYT1A-214ENST00000473978 TMEM106CQ9BVX2 250 aa16.91■□□□□ 0.3
PCYT1A-214ENST00000473978 DDX60Q8IY21 1712 aaKnown RBP16.9■□□□□ 0.3
PCYT1A-214ENST00000473978 CD99L2Q8TCZ2 262 aa16.9■□□□□ 0.3
PCYT1A-214ENST00000473978 EYA3Q99504 573 aa16.9■□□□□ 0.3
PCYT1A-214ENST00000473978 MYOZ2Q9NPC6 264 aa16.9■□□□□ 0.3
PCYT1A-214ENST00000473978 TRIM26Q12899 539 aaPredicted RBP16.89■□□□□ 0.29
PCYT1A-214ENST00000473978 TCIRG1Q13488 830 aa16.89■□□□□ 0.29
PCYT1A-214ENST00000473978 SPRYD7Q5W111 196 aa16.89■□□□□ 0.29
PCYT1A-214ENST00000473978 RSBN1LQ6PCB5 846 aaPredicted RBP16.89■□□□□ 0.29
PCYT1A-214ENST00000473978 AGBL3Q8NEM8 1001 aa16.89■□□□□ 0.29
PCYT1A-214ENST00000473978 TBC1D16Q8TBP0 767 aa16.89■□□□□ 0.29
PCYT1A-214ENST00000473978 CELF1Q92879 486 aaKnown RBP16.89■□□□□ 0.29
PCYT1A-214ENST00000473978 THUMPD2Q9BTF0 503 aaKnown RBP16.89■□□□□ 0.29
PCYT1A-214ENST00000473978 HTATSF1O43719 755 aaKnown RBP16.88■□□□□ 0.29
PCYT1A-214ENST00000473978 EIF4A1P60842 406 aaKnown RBP16.88■□□□□ 0.29
PCYT1A-214ENST00000473978 CAP1Q01518 475 aa16.88■□□□□ 0.29
PCYT1A-214ENST00000473978 LRP10Q7Z4F1 713 aa16.88■□□□□ 0.29
PCYT1A-214ENST00000473978 NLRP10Q86W26 655 aa16.88■□□□□ 0.29
PCYT1A-214ENST00000473978 IFNL1Q8IU54 200 aa16.88■□□□□ 0.29
PCYT1A-214ENST00000473978 ERO1AQ96HE7 468 aa16.88■□□□□ 0.29
PCYT1A-214ENST00000473978 ZNF333Q96JL9 665 aa16.88■□□□□ 0.29
PCYT1A-214ENST00000473978 ZNF609O15014 1411 aa16.88■□□□□ 0.29
PCYT1A-214ENST00000473978 PER1O15534 1290 aaPredicted RBP16.87■□□□□ 0.29
PCYT1A-214ENST00000473978 GMLQ99445 158 aa16.87■□□□□ 0.29
PCYT1A-214ENST00000473978 ZC3H12CQ9C0D7 883 aaKnown RBP16.87■□□□□ 0.29
PCYT1A-214ENST00000473978 EFCC1Q9HA90 598 aa16.87■□□□□ 0.29
PCYT1A-214ENST00000473978 TRMT112Q9UI30 125 aaKnown RBP16.87■□□□□ 0.29
PCYT1A-214ENST00000473978 COL4A1P02462 1669 aa16.87■□□□□ 0.29
PCYT1A-214ENST00000473978 SH3TC1Q8TE82 1336 aa16.87■□□□□ 0.29
PCYT1A-214ENST00000473978 USP17L8P0C7I0 530 aa16.87■□□□□ 0.29
PCYT1A-214ENST00000473978 MNX1P50219 401 aaPredicted RBP16.87■□□□□ 0.29
PCYT1A-214ENST00000473978 PRKG1Q13976 671 aa16.87■□□□□ 0.29
PCYT1A-214ENST00000473978 NBPF9Q3BBW0 867 aa16.87■□□□□ 0.29
PCYT1A-214ENST00000473978 IGF2BP3O00425 579 aaKnown RBP eCLIP16.86■□□□□ 0.29
PCYT1A-214ENST00000473978 NF2P35240 595 aa16.86■□□□□ 0.29
PCYT1A-214ENST00000473978 INHBEP58166 350 aa16.86■□□□□ 0.29
PCYT1A-214ENST00000473978 NECTIN2Q92692 538 aa16.86■□□□□ 0.29
PCYT1A-214ENST00000473978 ZNF428Q96B54 188 aa16.86■□□□□ 0.29
PCYT1A-214ENST00000473978 KDM3BQ7LBC6 1761 aa16.85■□□□□ 0.29
PCYT1A-214ENST00000473978 ERBB4Q15303 1308 aa16.85■□□□□ 0.29
PCYT1A-214ENST00000473978 MANSC4A6NHS7 340 aaPredicted RBP16.85■□□□□ 0.29
PCYT1A-214ENST00000473978 G3V3G9 751 aa16.85■□□□□ 0.29
PCYT1A-214ENST00000473978 LDLRAD1Q5T700 205 aa16.85■□□□□ 0.29
PCYT1A-214ENST00000473978 DCAF8Q5TAQ9 597 aa16.85■□□□□ 0.29
PCYT1A-214ENST00000473978 ARMC9Q7Z3E5 817 aa16.85■□□□□ 0.29
PCYT1A-214ENST00000473978 CNGB1Q14028 1251 aaPredicted RBP16.84■□□□□ 0.29
PCYT1A-214ENST00000473978 PDIA6Q15084 440 aa16.84■□□□□ 0.29
PCYT1A-214ENST00000473978 SLC4A8Q2Y0W8 1093 aa16.84■□□□□ 0.29
PCYT1A-214ENST00000473978 PNISRQ8TF01 805 aaKnown RBP16.84■□□□□ 0.29
PCYT1A-214ENST00000473978 ANXA1P04083 346 aa16.83■□□□□ 0.28
PCYT1A-214ENST00000473978 CRHR2Q13324 411 aa16.83■□□□□ 0.28
PCYT1A-214ENST00000473978 PROSER3Q2NL68 480 aa16.83■□□□□ 0.28
PCYT1A-214ENST00000473978 PRO3102Q9H379 93 aa16.83■□□□□ 0.28
PCYT1A-214ENST00000473978 FZD1Q9UP38 647 aa16.83■□□□□ 0.28
PCYT1A-214ENST00000473978 MYCP01106 439 aaPredicted RBP16.82■□□□□ 0.28
PCYT1A-214ENST00000473978 SP3Q02447 781 aa16.82■□□□□ 0.28
PCYT1A-214ENST00000473978 HSP90AB3PQ58FF7 597 aa16.82■□□□□ 0.28
PCYT1A-214ENST00000473978 ANGEL1Q9UNK9 670 aaKnown RBP16.82■□□□□ 0.28
PCYT1A-214ENST00000473978 TIMELESSQ9UNS1 1208 aa16.82■□□□□ 0.28
PCYT1A-214ENST00000473978 VCANP13611 3396 aa16.82■□□□□ 0.28
PCYT1A-214ENST00000473978 UFL1O94874 794 aa16.81■□□□□ 0.28
PCYT1A-214ENST00000473978 U2AF1L5P0DN76 240 aaPredicted RBP16.81■□□□□ 0.28
PCYT1A-214ENST00000473978 U2AF1Q01081 240 aaKnown RBP eCLIP16.81■□□□□ 0.28
PCYT1A-214ENST00000473978 SF3B3Q15393 1217 aaKnown RBP16.81■□□□□ 0.28
PCYT1A-214ENST00000473978 SLC9C1Q4G0N8 1177 aa16.81■□□□□ 0.28
PCYT1A-214ENST00000473978 NBPF11Q86T75 865 aa16.81■□□□□ 0.28
PCYT1A-214ENST00000473978 PODXL2Q9NZ53 605 aa16.81■□□□□ 0.28
PCYT1A-214ENST00000473978 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.81■□□□□ 0.28
PCYT1A-214ENST00000473978 PTCH2Q9Y6C5 1203 aa16.81■□□□□ 0.28
PCYT1A-214ENST00000473978 PSME4Q14997 1843 aa16.81■□□□□ 0.28
PCYT1A-214ENST00000473978 WTIPA6NIX2 430 aaPredicted RBP16.8■□□□□ 0.28
PCYT1A-214ENST00000473978 WNT10BO00744 389 aa16.8■□□□□ 0.28
PCYT1A-214ENST00000473978 DPF3Q92784 378 aa16.8■□□□□ 0.28
PCYT1A-214ENST00000473978 SLC10A4Q96EP9 437 aa16.8■□□□□ 0.28
PCYT1A-214ENST00000473978 ZBTB48P10074 688 aaPredicted RBP16.79■□□□□ 0.28
PCYT1A-214ENST00000473978 EIF2S2P20042 333 aaKnown RBP16.79■□□□□ 0.28
PCYT1A-214ENST00000473978 COPS6Q7L5N1 327 aa16.79■□□□□ 0.28
PCYT1A-214ENST00000473978 USP17L3A6NCW0 530 aa16.79■□□□□ 0.28
PCYT1A-214ENST00000473978 USP17L4A6NCW7 530 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms