RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 SCHIP1Q9P0W5 487 aaPredicted RBP3.99□□□□□ -1.77
CALD1-216ENST00000473714 CHIC2Q9UKJ5 165 aa3.99□□□□□ -1.77
CALD1-216ENST00000473714 TBC1D2BQ9UPU7 963 aa3.99□□□□□ -1.77
CALD1-216ENST00000473714 TNIKQ9UKE5 1360 aa3.99□□□□□ -1.77
CALD1-216ENST00000473714 LRP5O75197 1615 aa3.99□□□□□ -1.77
CALD1-216ENST00000473714 WDR7Q9Y4E6 1490 aa3.98□□□□□ -1.77
CALD1-216ENST00000473714 FRMPD1Q5SYB0 1578 aa3.98□□□□□ -1.77
CALD1-216ENST00000473714 SERTM1A2A2V5 107 aa3.98□□□□□ -1.77
CALD1-216ENST00000473714 ALX3O95076 343 aa3.98□□□□□ -1.77
CALD1-216ENST00000473714 SPINK2P20155 84 aa3.98□□□□□ -1.77
CALD1-216ENST00000473714 MAP7D1Q3KQU3 841 aa3.98□□□□□ -1.77
CALD1-216ENST00000473714 FAM35AQ86V20 835 aa3.98□□□□□ -1.77
CALD1-216ENST00000473714 WWC1Q8IX03 1113 aa3.98□□□□□ -1.77
CALD1-216ENST00000473714 TMEM130Q8N3G9 435 aa3.98□□□□□ -1.77
CALD1-216ENST00000473714 POU5F2Q8N7G0 328 aa3.98□□□□□ -1.77
CALD1-216ENST00000473714 CLUAP1Q96AJ1 413 aa3.98□□□□□ -1.77
CALD1-216ENST00000473714 CCDC97Q96F63 343 aaPredicted RBP3.98□□□□□ -1.77
CALD1-216ENST00000473714 KRTAP4-5Q9BYR2 181 aa3.98□□□□□ -1.77
CALD1-216ENST00000473714 MRPL18Q9H0U6 180 aaKnown RBP3.98□□□□□ -1.77
CALD1-216ENST00000473714 ADGRE2Q9UHX3 823 aa3.98□□□□□ -1.77
CALD1-216ENST00000473714 CPS1P31327 1500 aa3.98□□□□□ -1.77
CALD1-216ENST00000473714 CDK12Q9NYV4 1490 aaPredicted RBP3.98□□□□□ -1.77
CALD1-216ENST00000473714 ARHGEF40Q8TER5 1519 aa3.97□□□□□ -1.77
CALD1-216ENST00000473714 ARHGEF12Q9NZN5 1544 aa3.97□□□□□ -1.77
CALD1-216ENST00000473714 C1QTNF8P60827 252 aa3.97□□□□□ -1.77
CALD1-216ENST00000473714 IRF5Q13568 498 aa3.97□□□□□ -1.77
CALD1-216ENST00000473714 MLECQ14165 292 aa3.97□□□□□ -1.77
CALD1-216ENST00000473714 ASIC4Q96FT7 647 aa3.97□□□□□ -1.77
CALD1-216ENST00000473714 PNMA5Q96PV4 448 aa3.97□□□□□ -1.77
CALD1-216ENST00000473714 NAGPAQ9UK23 515 aa3.97□□□□□ -1.77
CALD1-216ENST00000473714 ZNF777Q9ULD5 760 aaPredicted RBP3.97□□□□□ -1.77
CALD1-216ENST00000473714 CAMSAP1Q5T5Y3 1602 aa3.96□□□□□ -1.78
CALD1-216ENST00000473714 A6NJR5 290 aa3.96□□□□□ -1.78
CALD1-216ENST00000473714 DLL1O00548 723 aa3.96□□□□□ -1.78
CALD1-216ENST00000473714 CPB1P15086 417 aa3.96□□□□□ -1.78
CALD1-216ENST00000473714 GLB1P16278 677 aa3.96□□□□□ -1.78
CALD1-216ENST00000473714 RXRBP28702 533 aa3.96□□□□□ -1.78
CALD1-216ENST00000473714 TYRO3Q06418 890 aa3.96□□□□□ -1.78
CALD1-216ENST00000473714 TRIM26Q12899 539 aaPredicted RBP3.96□□□□□ -1.78
CALD1-216ENST00000473714 LCE4AQ5TA78 99 aa3.96□□□□□ -1.78
CALD1-216ENST00000473714 ZNF772Q68DY9 489 aaPredicted RBP3.96□□□□□ -1.78
CALD1-216ENST00000473714 ELMSAN1Q6PJG2 1045 aa3.96□□□□□ -1.78
CALD1-216ENST00000473714 DTX1Q86Y01 620 aa3.96□□□□□ -1.78
CALD1-216ENST00000473714 ZDHHC13Q8IUH4 622 aa3.96□□□□□ -1.78
CALD1-216ENST00000473714 HSH2DQ96JZ2 352 aa3.96□□□□□ -1.78
CALD1-216ENST00000473714 PRM3Q9NNZ6 103 aa3.96□□□□□ -1.78
CALD1-216ENST00000473714 AKNAQ7Z591 1439 aa3.95□□□□□ -1.78
CALD1-216ENST00000473714 F8W735 103 aaPredicted RBP3.95□□□□□ -1.78
CALD1-216ENST00000473714 DHX15O43143 795 aaKnown RBP3.95□□□□□ -1.78
CALD1-216ENST00000473714 DEAF1O75398 565 aaPredicted RBP3.95□□□□□ -1.78
CALD1-216ENST00000473714 VAC14Q08AM6 782 aa3.95□□□□□ -1.78
CALD1-216ENST00000473714 C1orf53Q5VUE5 145 aa3.95□□□□□ -1.78
CALD1-216ENST00000473714 PROSER2Q86WR7 435 aaPredicted RBP3.95□□□□□ -1.78
CALD1-216ENST00000473714 CCDC82Q8N4S0 544 aa3.95□□□□□ -1.78
CALD1-216ENST00000473714 PLPP7Q8NBV4 271 aa3.95□□□□□ -1.78
CALD1-216ENST00000473714 BANK1Q8NDB2 785 aa3.95□□□□□ -1.78
CALD1-216ENST00000473714 FRRS1LQ9P0K9 344 aa3.95□□□□□ -1.78
CALD1-216ENST00000473714 CHMP3Q9Y3E7 222 aa3.95□□□□□ -1.78
CALD1-216ENST00000473714 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.95□□□□□ -1.78
CALD1-216ENST00000473714 ERICH3Q5RHP9 1530 aa3.95□□□□□ -1.78
CALD1-216ENST00000473714 LRRC7Q96NW7 1537 aa3.95□□□□□ -1.78
CALD1-216ENST00000473714 TRAPPC8Q9Y2L5 1435 aa3.95□□□□□ -1.78
CALD1-216ENST00000473714 NFIAQ12857 509 aa3.94□□□□□ -1.78
CALD1-216ENST00000473714 CCINQ13939 588 aa3.94□□□□□ -1.78
CALD1-216ENST00000473714 MCM6Q14566 821 aa3.94□□□□□ -1.78
CALD1-216ENST00000473714 GRIK5Q16478 980 aa3.94□□□□□ -1.78
CALD1-216ENST00000473714 FBLN7Q53RD9 439 aa3.94□□□□□ -1.78
CALD1-216ENST00000473714 TBCELQ5QJ74 424 aa3.94□□□□□ -1.78
CALD1-216ENST00000473714 SH3PXD2AQ5TCZ1 1133 aa3.94□□□□□ -1.78
CALD1-216ENST00000473714 SLC9A9Q8IVB4 645 aa3.94□□□□□ -1.78
CALD1-216ENST00000473714 ZNF280CQ8ND82 737 aa3.94□□□□□ -1.78
CALD1-216ENST00000473714 DCAF11Q8TEB1 546 aa3.94□□□□□ -1.78
CALD1-216ENST00000473714 TTC9Q92623 222 aa3.94□□□□□ -1.78
CALD1-216ENST00000473714 SUSD3Q96L08 255 aa3.94□□□□□ -1.78
CALD1-216ENST00000473714 C1orf115Q9H7X2 142 aa3.94□□□□□ -1.78
CALD1-216ENST00000473714 SERPINA10Q9UK55 444 aa3.94□□□□□ -1.78
CALD1-216ENST00000473714 HCN4Q9Y3Q4 1203 aa3.94□□□□□ -1.78
CALD1-216ENST00000473714 PCDHGA11Q9Y5H2 935 aa3.94□□□□□ -1.78
CALD1-216ENST00000473714 PLA2R1Q13018 1463 aa3.93□□□□□ -1.78
CALD1-216ENST00000473714 TCOF1Q13428 1488 aaKnown RBP3.93□□□□□ -1.78
CALD1-216ENST00000473714 NEO1Q92859 1461 aa3.93□□□□□ -1.78
CALD1-216ENST00000473714 SHANK2Q9UPX8 1470 aa3.93□□□□□ -1.78
CALD1-216ENST00000473714 RAPGEF6Q8TEU7 1601 aa3.93□□□□□ -1.78
CALD1-216ENST00000473714 PIK3CDO00329 1044 aa3.93□□□□□ -1.78
CALD1-216ENST00000473714 NFKB1P19838 968 aa3.93□□□□□ -1.78
CALD1-216ENST00000473714 PSME1Q06323 249 aa3.93□□□□□ -1.78
CALD1-216ENST00000473714 PERM1Q5SV97 790 aa3.93□□□□□ -1.78
CALD1-216ENST00000473714 ABI1Q8IZP0 508 aa3.93□□□□□ -1.78
CALD1-216ENST00000473714 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.93□□□□□ -1.78
CALD1-216ENST00000473714 CCER1Q8TC90 406 aaPredicted RBP3.93□□□□□ -1.78
CALD1-216ENST00000473714 LPIN3Q9BQK8 851 aa3.93□□□□□ -1.78
CALD1-216ENST00000473714 GSX2Q9BZM3 304 aa3.93□□□□□ -1.78
CALD1-216ENST00000473714 ZNF358Q9NW07 568 aa3.93□□□□□ -1.78
CALD1-216ENST00000473714 CARMIL2Q6F5E8 1435 aa3.93□□□□□ -1.78
CALD1-216ENST00000473714 C3P01024 1663 aa3.93□□□□□ -1.78
CALD1-216ENST00000473714 RICTORQ6R327 1708 aa3.92□□□□□ -1.78
CALD1-216ENST00000473714 RNF43Q68DV7 783 aa3.92□□□□□ -1.78
CALD1-216ENST00000473714 Q6ZS46 218 aa3.92□□□□□ -1.78
CALD1-216ENST00000473714 BTLAQ7Z6A9 289 aa3.92□□□□□ -1.78
CALD1-216ENST00000473714 TNS4Q8IZW8 715 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms