RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 ATP8B2P98198 1209 aa11.36□□□□□ -0.59
SMG5-203ENST00000473643 CEP85Q6P2H3 762 aa11.36□□□□□ -0.59
SMG5-203ENST00000473643 ANKRD44Q8N8A2 993 aa11.36□□□□□ -0.59
SMG5-203ENST00000473643 SMC1BQ8NDV3 1235 aa11.36□□□□□ -0.59
SMG5-203ENST00000473643 CELF1Q92879 486 aaKnown RBP11.36□□□□□ -0.59
SMG5-203ENST00000473643 PCDHB15Q9Y5E8 787 aa11.36□□□□□ -0.59
SMG5-203ENST00000473643 ANKRD36CQ5JPF3 1778 aa11.36□□□□□ -0.59
SMG5-203ENST00000473643 ZNF541Q9H0D2 1346 aa11.35□□□□□ -0.59
SMG5-203ENST00000473643 APLP1P51693 650 aa11.35□□□□□ -0.59
SMG5-203ENST00000473643 RPS8P62241 208 aaKnown RBP11.35□□□□□ -0.59
SMG5-203ENST00000473643 DPP8Q6V1X1 898 aaPredicted RBP11.35□□□□□ -0.59
SMG5-203ENST00000473643 SIRT2Q8IXJ6 389 aa11.35□□□□□ -0.59
SMG5-203ENST00000473643 GPC2Q8N158 579 aa11.35□□□□□ -0.59
SMG5-203ENST00000473643 LARGE2Q8N3Y3 721 aa11.35□□□□□ -0.59
SMG5-203ENST00000473643 MPNDQ8N594 471 aa11.35□□□□□ -0.59
SMG5-203ENST00000473643 SUPT20HQ8NEM7 779 aa11.35□□□□□ -0.59
SMG5-203ENST00000473643 BICC1Q9H694 974 aaKnown RBP11.35□□□□□ -0.59
SMG5-203ENST00000473643 C1orf115Q9H7X2 142 aa11.35□□□□□ -0.59
SMG5-203ENST00000473643 IQCA1LA6NCM1 817 aa11.34□□□□□ -0.59
SMG5-203ENST00000473643 HDAC1Q13547 482 aaPredicted RBP11.34□□□□□ -0.59
SMG5-203ENST00000473643 POLA2Q14181 598 aa11.34□□□□□ -0.59
SMG5-203ENST00000473643 DNAJC5GQ8N7S2 189 aa11.34□□□□□ -0.59
SMG5-203ENST00000473643 TTLL11Q8NHH1 800 aa11.34□□□□□ -0.59
SMG5-203ENST00000473643 SSH3Q8TE77 659 aa11.34□□□□□ -0.59
SMG5-203ENST00000473643 TAF1DQ9H5J8 278 aaPredicted RBP11.34□□□□□ -0.59
SMG5-203ENST00000473643 CCDC88AQ3V6T2 1871 aa11.34□□□□□ -0.59
SMG5-203ENST00000473643 DICER1Q9UPY3 1922 aaKnown RBP11.33□□□□□ -0.6
SMG5-203ENST00000473643 RTL9Q8NET4 1388 aa11.33□□□□□ -0.6
SMG5-203ENST00000473643 WDR90Q96KV7 1748 aa11.33□□□□□ -0.6
SMG5-203ENST00000473643 PPIP5K2O43314 1243 aa11.33□□□□□ -0.6
SMG5-203ENST00000473643 CTSWP56202 376 aa11.33□□□□□ -0.6
SMG5-203ENST00000473643 EIF6P56537 245 aaKnown RBP11.33□□□□□ -0.6
SMG5-203ENST00000473643 KIAA2012Q0VF49 1180 aa11.33□□□□□ -0.6
SMG5-203ENST00000473643 CCDC152Q4G0S7 254 aa11.33□□□□□ -0.6
SMG5-203ENST00000473643 LMBR1LQ6UX01 489 aa11.33□□□□□ -0.6
SMG5-203ENST00000473643 SEC31BQ9NQW1 1179 aa11.33□□□□□ -0.6
SMG5-203ENST00000473643 PPP4R2Q9NY27 417 aa11.33□□□□□ -0.6
SMG5-203ENST00000473643 PCNTO95613 3336 aa11.33□□□□□ -0.6
SMG5-203ENST00000473643 COL4A5P29400 1685 aa11.33□□□□□ -0.6
SMG5-203ENST00000473643 PNMA6EA0A0J9YXQ4 647 aa11.32□□□□□ -0.6
SMG5-203ENST00000473643 HMMRO75330 724 aa11.32□□□□□ -0.6
SMG5-203ENST00000473643 RFX5P48382 616 aaPredicted RBP11.32□□□□□ -0.6
SMG5-203ENST00000473643 AOC3Q16853 763 aa11.32□□□□□ -0.6
SMG5-203ENST00000473643 NIM1KQ8IY84 436 aa11.32□□□□□ -0.6
SMG5-203ENST00000473643 HACL1Q9UJ83 578 aa11.32□□□□□ -0.6
SMG5-203ENST00000473643 ZNRF3Q9ULT6 936 aa11.32□□□□□ -0.6
SMG5-203ENST00000473643 NSFL1CQ9UNZ2 370 aaKnown RBP11.32□□□□□ -0.6
SMG5-203ENST00000473643 TIAM2Q8IVF5 1701 aa11.32□□□□□ -0.6
SMG5-203ENST00000473643 CACNA1SQ13698 1873 aa11.32□□□□□ -0.6
SMG5-203ENST00000473643 SRGAP3O43295 1099 aa11.31□□□□□ -0.6
SMG5-203ENST00000473643 POTEIP0CG38 1075 aa11.31□□□□□ -0.6
SMG5-203ENST00000473643 POTEJP0CG39 1038 aa11.31□□□□□ -0.6
SMG5-203ENST00000473643 GPSM2P81274 684 aa11.31□□□□□ -0.6
SMG5-203ENST00000473643 CXCL9Q07325 125 aa11.31□□□□□ -0.6
SMG5-203ENST00000473643 CHADLQ6NUI6 762 aa11.31□□□□□ -0.6
SMG5-203ENST00000473643 RWDD1Q9H446 243 aaPredicted RBP11.31□□□□□ -0.6
SMG5-203ENST00000473643 COPRSQ9NQ92 184 aa11.31□□□□□ -0.6
SMG5-203ENST00000473643 PODXL2Q9NZ53 605 aa11.31□□□□□ -0.6
SMG5-203ENST00000473643 POLLQ9UGP5 575 aa11.31□□□□□ -0.6
SMG5-203ENST00000473643 NOP58Q9Y2X3 529 aaKnown RBP11.31□□□□□ -0.6
SMG5-203ENST00000473643 GTF3C3Q9Y5Q9 886 aa11.31□□□□□ -0.6
SMG5-203ENST00000473643 IGHDP01880 384 aa11.3□□□□□ -0.6
SMG5-203ENST00000473643 EPHX2P34913 555 aa11.3□□□□□ -0.6
SMG5-203ENST00000473643 SCNN1DP51172 638 aa11.3□□□□□ -0.6
SMG5-203ENST00000473643 PTPN12Q05209 780 aaKnown RBP11.3□□□□□ -0.6
SMG5-203ENST00000473643 WASHC4Q2M389 1173 aa11.3□□□□□ -0.6
SMG5-203ENST00000473643 PNMA8AQ86V59 439 aaPredicted RBP11.3□□□□□ -0.6
SMG5-203ENST00000473643 LDHDQ86WU2 507 aa11.3□□□□□ -0.6
SMG5-203ENST00000473643 TBC1D16Q8TBP0 767 aa11.3□□□□□ -0.6
SMG5-203ENST00000473643 GREM2Q9H772 168 aa11.3□□□□□ -0.6
SMG5-203ENST00000473643 DCTPP1Q9H773 170 aa11.3□□□□□ -0.6
SMG5-203ENST00000473643 FBXO3Q9UK99 471 aa11.3□□□□□ -0.6
SMG5-203ENST00000473643 GJA3Q9Y6H8 435 aa11.3□□□□□ -0.6
SMG5-203ENST00000473643 DDX60Q8IY21 1712 aaKnown RBP11.29□□□□□ -0.6
SMG5-203ENST00000473643 ANKRD18BA2A2Z9 1011 aa11.29□□□□□ -0.6
SMG5-203ENST00000473643 ITGA6P23229 1130 aa11.29□□□□□ -0.6
SMG5-203ENST00000473643 IFIT5Q13325 482 aaKnown RBP11.29□□□□□ -0.6
SMG5-203ENST00000473643 CCDC57Q2TAC2 916 aa11.29□□□□□ -0.6
SMG5-203ENST00000473643 FAM161AQ3B820 660 aa11.29□□□□□ -0.6
SMG5-203ENST00000473643 CCDC85AQ96PX6 553 aaPredicted RBP11.29□□□□□ -0.6
SMG5-203ENST00000473643 LAMB2P55268 1798 aa11.28□□□□□ -0.6
SMG5-203ENST00000473643 COL4A1P02462 1669 aa11.28□□□□□ -0.6
SMG5-203ENST00000473643 YDJCA8MPS7 323 aa11.28□□□□□ -0.6
SMG5-203ENST00000473643 C6orf229H3BNL8 230 aa11.28□□□□□ -0.6
SMG5-203ENST00000473643 ITGBL1O95965 494 aaPredicted RBP11.28□□□□□ -0.6
SMG5-203ENST00000473643 EPS15P42566 896 aa11.28□□□□□ -0.6
SMG5-203ENST00000473643 HTRA3P83110 453 aa11.28□□□□□ -0.6
SMG5-203ENST00000473643 CIAPIN1Q6FI81 312 aa11.28□□□□□ -0.6
SMG5-203ENST00000473643 ANKRD18AQ8IVF6 992 aa11.28□□□□□ -0.6
SMG5-203ENST00000473643 SMC5Q8IY18 1101 aa11.28□□□□□ -0.6
SMG5-203ENST00000473643 CCDC136Q96JN2 1154 aa11.28□□□□□ -0.6
SMG5-203ENST00000473643 CDC5LQ99459 802 aaKnown RBP11.28□□□□□ -0.6
SMG5-203ENST00000473643 BSDC1Q9NW68 430 aaPredicted RBP11.28□□□□□ -0.6
SMG5-203ENST00000473643 RIMBP2O15034 1052 aa11.27□□□□□ -0.61
SMG5-203ENST00000473643 CIAO1O76071 339 aa11.27□□□□□ -0.61
SMG5-203ENST00000473643 TNIP1Q15025 636 aa11.27□□□□□ -0.61
SMG5-203ENST00000473643 EAPPQ56P03 285 aaPredicted RBP11.27□□□□□ -0.61
SMG5-203ENST00000473643 HSP90AB4PQ58FF6 505 aa11.27□□□□□ -0.61
SMG5-203ENST00000473643 GCC1Q96CN9 775 aa11.27□□□□□ -0.61
SMG5-203ENST00000473643 EYA3Q99504 573 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms