RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 PCDH11XQ9BZA7 1347 aa9.27□□□□□ -0.93
CCDC171-205ENST00000472806 PCDH11YQ9BZA8 1340 aa9.27□□□□□ -0.93
CCDC171-205ENST00000472806 MEGF6O75095 1541 aa9.26□□□□□ -0.93
CCDC171-205ENST00000472806 HIP1O00291 1037 aa9.26□□□□□ -0.93
CCDC171-205ENST00000472806 SLC10A3P09131 477 aa9.26□□□□□ -0.93
CCDC171-205ENST00000472806 G3BP1Q13283 466 aaKnown RBP eCLIP9.26□□□□□ -0.93
CCDC171-205ENST00000472806 BRINP3Q76B58 766 aa9.26□□□□□ -0.93
CCDC171-205ENST00000472806 IL17RAQ96F46 866 aa9.26□□□□□ -0.93
CCDC171-205ENST00000472806 TMEM134Q9H6X4 195 aa9.26□□□□□ -0.93
CCDC171-205ENST00000472806 PRDM11Q9NQV5 511 aa9.26□□□□□ -0.93
CCDC171-205ENST00000472806 SOS2Q07890 1332 aaPredicted RBP9.26□□□□□ -0.93
CCDC171-205ENST00000472806 WDR17Q8IZU2 1322 aa9.26□□□□□ -0.93
CCDC171-205ENST00000472806 TUBGCP6Q96RT7 1819 aa9.26□□□□□ -0.93
CCDC171-205ENST00000472806 ERVV-2B6SEH9 535 aa9.25□□□□□ -0.93
CCDC171-205ENST00000472806 IFIT2P09913 472 aaKnown RBP9.25□□□□□ -0.93
CCDC171-205ENST00000472806 DNAJB2P25686 324 aa9.25□□□□□ -0.93
CCDC171-205ENST00000472806 KIAA1211Q6ZU35 1233 aa9.25□□□□□ -0.93
CCDC171-205ENST00000472806 NFATC2IPQ8NCF5 419 aa9.25□□□□□ -0.93
CCDC171-205ENST00000472806 METTL22Q9BUU2 404 aaPredicted RBP9.25□□□□□ -0.93
CCDC171-205ENST00000472806 IL1RAPL2Q9NP60 686 aa9.25□□□□□ -0.93
CCDC171-205ENST00000472806 ANO2Q9NQ90 1003 aa9.25□□□□□ -0.93
CCDC171-205ENST00000472806 COL15A1P39059 1388 aa9.24□□□□□ -0.93
CCDC171-205ENST00000472806 TRAK2O60296 914 aa9.24□□□□□ -0.93
CCDC171-205ENST00000472806 ANXA1P04083 346 aa9.24□□□□□ -0.93
CCDC171-205ENST00000472806 CLEC17AQ6ZS10 378 aa9.24□□□□□ -0.93
CCDC171-205ENST00000472806 TOM1L2Q6ZVM7 507 aa9.24□□□□□ -0.93
CCDC171-205ENST00000472806 NUTM1Q86Y26 1132 aa9.24□□□□□ -0.93
CCDC171-205ENST00000472806 ZCRB1Q8TBF4 217 aaKnown RBP9.24□□□□□ -0.93
CCDC171-205ENST00000472806 TNPO1Q92973 898 aaKnown RBP9.24□□□□□ -0.93
CCDC171-205ENST00000472806 CARD10Q9BWT7 1032 aa9.24□□□□□ -0.93
CCDC171-205ENST00000472806 ECHDC1Q9NTX5 307 aa9.24□□□□□ -0.93
CCDC171-205ENST00000472806 SLAIN2Q9P270 581 aa9.24□□□□□ -0.93
CCDC171-205ENST00000472806 LAMB4A4D0S4 1761 aa9.24□□□□□ -0.93
CCDC171-205ENST00000472806 AIMP1Q12904 312 aaKnown RBP9.23□□□□□ -0.93
CCDC171-205ENST00000472806 CHRNA2Q15822 529 aa9.23□□□□□ -0.93
CCDC171-205ENST00000472806 PROSER3Q2NL68 480 aa9.23□□□□□ -0.93
CCDC171-205ENST00000472806 PI4K2BQ8TCG2 481 aa9.23□□□□□ -0.93
CCDC171-205ENST00000472806 CABLES1Q8TDN4 633 aa9.23□□□□□ -0.93
CCDC171-205ENST00000472806 XAGE3Q8WTP9 111 aa9.23□□□□□ -0.93
CCDC171-205ENST00000472806 DDX17Q92841 729 aaKnown RBP9.23□□□□□ -0.93
CCDC171-205ENST00000472806 EVI5LQ96CN4 794 aa9.23□□□□□ -0.93
CCDC171-205ENST00000472806 DIAPH3Q9NSV4 1193 aa9.23□□□□□ -0.93
CCDC171-205ENST00000472806 XIRP1Q702N8 1843 aaKnown RBP9.23□□□□□ -0.93
CCDC171-205ENST00000472806 GOLGA6L3A6NEY3 463 aa9.22□□□□□ -0.93
CCDC171-205ENST00000472806 NEURL1BA8MQ27 555 aa9.22□□□□□ -0.93
CCDC171-205ENST00000472806 CYP27B1O15528 508 aa9.22□□□□□ -0.93
CCDC171-205ENST00000472806 S1PR4O95977 384 aa9.22□□□□□ -0.93
CCDC171-205ENST00000472806 CFHP08603 1231 aa9.22□□□□□ -0.93
CCDC171-205ENST00000472806 MYL6BP14649 208 aa9.22□□□□□ -0.93
CCDC171-205ENST00000472806 IL2RBP14784 551 aa9.22□□□□□ -0.93
CCDC171-205ENST00000472806 HSPA2P54652 639 aa9.22□□□□□ -0.93
CCDC171-205ENST00000472806 SLC39A6Q13433 755 aa9.22□□□□□ -0.93
CCDC171-205ENST00000472806 GCKRQ14397 625 aa9.22□□□□□ -0.93
CCDC171-205ENST00000472806 CWF19L2Q2TBE0 894 aaKnown RBP9.22□□□□□ -0.93
CCDC171-205ENST00000472806 COPS6Q7L5N1 327 aa9.22□□□□□ -0.93
CCDC171-205ENST00000472806 PLBD2Q8NHP8 589 aa9.22□□□□□ -0.93
CCDC171-205ENST00000472806 RBM46Q8TBY0 533 aaKnown RBP9.22□□□□□ -0.93
CCDC171-205ENST00000472806 INTS4Q96HW7 963 aaKnown RBP9.22□□□□□ -0.93
CCDC171-205ENST00000472806 SUCLG2Q96I99 432 aa9.22□□□□□ -0.93
CCDC171-205ENST00000472806 ZNF496Q96IT1 587 aaPredicted RBP9.22□□□□□ -0.93
CCDC171-205ENST00000472806 MYD88Q99836 296 aa9.22□□□□□ -0.93
CCDC171-205ENST00000472806 RAD50Q92878 1312 aa9.22□□□□□ -0.93
CCDC171-205ENST00000472806 C5P01031 1676 aa9.22□□□□□ -0.93
CCDC171-205ENST00000472806 COL5A2P05997 1499 aaPredicted RBP9.21□□□□□ -0.93
CCDC171-205ENST00000472806 AK9Q5TCS8 1911 aa9.21□□□□□ -0.93
CCDC171-205ENST00000472806 SGSM2O43147 1006 aa9.21□□□□□ -0.94
CCDC171-205ENST00000472806 CD2BP2O95400 341 aaKnown RBP9.21□□□□□ -0.94
CCDC171-205ENST00000472806 FECHP22830 423 aa9.21□□□□□ -0.94
CCDC171-205ENST00000472806 HSPA4P34932 840 aa9.21□□□□□ -0.94
CCDC171-205ENST00000472806 NEK4P51957 841 aa9.21□□□□□ -0.94
CCDC171-205ENST00000472806 EVA1CP58658 441 aa9.21□□□□□ -0.94
CCDC171-205ENST00000472806 TSHZ3Q63HK5 1081 aa9.21□□□□□ -0.94
CCDC171-205ENST00000472806 AACSQ86V21 672 aa9.21□□□□□ -0.94
CCDC171-205ENST00000472806 TICAM2Q86XR7 235 aa9.21□□□□□ -0.94
CCDC171-205ENST00000472806 TMUB1Q9BVT8 246 aa9.21□□□□□ -0.94
CCDC171-205ENST00000472806 TEX13AQ9BXU3 409 aaPredicted RBP9.21□□□□□ -0.94
CCDC171-205ENST00000472806 BICC1Q9H694 974 aaKnown RBP9.21□□□□□ -0.94
CCDC171-205ENST00000472806 STRCQ7RTU9 1775 aa9.2□□□□□ -0.94
CCDC171-205ENST00000472806 PRAMEF22A3QJZ6 481 aa9.2□□□□□ -0.94
CCDC171-205ENST00000472806 ACTN4O43707 911 aaKnown RBP9.2□□□□□ -0.94
CCDC171-205ENST00000472806 IGKV5-2P06315 115 aa9.2□□□□□ -0.94
CCDC171-205ENST00000472806 GGCXP38435 758 aa9.2□□□□□ -0.94
CCDC171-205ENST00000472806 SLC19A1P41440 591 aa9.2□□□□□ -0.94
CCDC171-205ENST00000472806 LIAT1Q6ZQX7 453 aa9.2□□□□□ -0.94
CCDC171-205ENST00000472806 COPRSQ9NQ92 184 aa9.2□□□□□ -0.94
CCDC171-205ENST00000472806 RFX7Q2KHR2 1363 aa9.2□□□□□ -0.94
CCDC171-205ENST00000472806 PDIA4P13667 645 aaKnown RBP9.19□□□□□ -0.94
CCDC171-205ENST00000472806 CUL4AQ13619 759 aa9.19□□□□□ -0.94
CCDC171-205ENST00000472806 RABL6Q3YEC7 729 aaPredicted RBP9.19□□□□□ -0.94
CCDC171-205ENST00000472806 PLA2G2CQ5R387 149 aa9.19□□□□□ -0.94
CCDC171-205ENST00000472806 RBM26Q5T8P6 1007 aaKnown RBP9.19□□□□□ -0.94
CCDC171-205ENST00000472806 NLRP7Q8WX94 980 aa9.19□□□□□ -0.94
CCDC171-205ENST00000472806 USP16Q9Y5T5 823 aa9.19□□□□□ -0.94
CCDC171-205ENST00000472806 NHSL1Q5SYE7 1610 aa9.19□□□□□ -0.94
CCDC171-205ENST00000472806 ABCA3Q99758 1704 aa9.19□□□□□ -0.94
CCDC171-205ENST00000472806 BAG4O95429 457 aaKnown RBP9.18□□□□□ -0.94
CCDC171-205ENST00000472806 CYP2E1P05181 493 aaPredicted RBP9.18□□□□□ -0.94
CCDC171-205ENST00000472806 ZKSCAN1P17029 563 aaPredicted RBP9.18□□□□□ -0.94
CCDC171-205ENST00000472806 SSFA2P28290 1259 aa9.18□□□□□ -0.94
CCDC171-205ENST00000472806 MRE11P49959 708 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms