RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 FAM86C2PA6NEL3 165 aa3.69□□□□□ -1.82
XRN1-210ENST00000472697 CDC45O75419 566 aa3.69□□□□□ -1.82
XRN1-210ENST00000472697 MRM1Q6IN84 353 aaKnown RBP3.69□□□□□ -1.82
XRN1-210ENST00000472697 BNC2Q6ZN30 1099 aaPredicted RBP3.69□□□□□ -1.82
XRN1-210ENST00000472697 Q6ZNB5 142 aa3.69□□□□□ -1.82
XRN1-210ENST00000472697 SEPT12Q8IYM1 358 aa3.69□□□□□ -1.82
XRN1-210ENST00000472697 CMTR1Q8N1G2 835 aaKnown RBP3.69□□□□□ -1.82
XRN1-210ENST00000472697 RASGRP4Q8TDF6 673 aa3.69□□□□□ -1.82
XRN1-210ENST00000472697 UBE2Q2Q8WVN8 375 aa3.69□□□□□ -1.82
XRN1-210ENST00000472697 AIDAQ96BJ3 306 aa3.69□□□□□ -1.82
XRN1-210ENST00000472697 ARMC5Q96C12 935 aa3.69□□□□□ -1.82
XRN1-210ENST00000472697 ITPKCQ96DU7 683 aa3.69□□□□□ -1.82
XRN1-210ENST00000472697 PSMD1Q99460 953 aa3.69□□□□□ -1.82
XRN1-210ENST00000472697 TRIM55Q9BYV6 548 aa3.69□□□□□ -1.82
XRN1-210ENST00000472697 SPC25Q9HBM1 224 aa3.69□□□□□ -1.82
XRN1-210ENST00000472697 SPG7Q9UQ90 795 aa3.69□□□□□ -1.82
XRN1-210ENST00000472697 ERCC6Q03468 1493 aa3.69□□□□□ -1.82
XRN1-210ENST00000472697 RNF223E7ERA6 249 aa3.68□□□□□ -1.82
XRN1-210ENST00000472697 ENPP3O14638 875 aa3.68□□□□□ -1.82
XRN1-210ENST00000472697 IRS4O14654 1257 aaPredicted RBP3.68□□□□□ -1.82
XRN1-210ENST00000472697 BACH1O14867 736 aa3.68□□□□□ -1.82
XRN1-210ENST00000472697 DNAJC6O75061 913 aa3.68□□□□□ -1.82
XRN1-210ENST00000472697 S100BP04271 92 aaPredicted RBP3.68□□□□□ -1.82
XRN1-210ENST00000472697 PDGFRBP09619 1106 aa3.68□□□□□ -1.82
XRN1-210ENST00000472697 GARTP22102 1010 aa3.68□□□□□ -1.82
XRN1-210ENST00000472697 MASP1P48740 699 aa3.68□□□□□ -1.82
XRN1-210ENST00000472697 CDK8P49336 464 aa3.68□□□□□ -1.82
XRN1-210ENST00000472697 FCGRTP55899 365 aa3.68□□□□□ -1.82
XRN1-210ENST00000472697 RELBQ01201 579 aa3.68□□□□□ -1.82
XRN1-210ENST00000472697 CENPCQ03188 943 aa3.68□□□□□ -1.82
XRN1-210ENST00000472697 C11orf91Q3C1V1 193 aa3.68□□□□□ -1.82
XRN1-210ENST00000472697 PRPF40BQ6NWY9 871 aaKnown RBP3.68□□□□□ -1.82
XRN1-210ENST00000472697 LHFPL2Q6ZUX7 228 aa3.68□□□□□ -1.82
XRN1-210ENST00000472697 GOLM1Q8NBJ4 401 aa3.68□□□□□ -1.82
XRN1-210ENST00000472697 ZFAND3Q9H8U3 227 aa3.68□□□□□ -1.82
XRN1-210ENST00000472697 MICAL2O94851 1124 aa3.68□□□□□ -1.82
XRN1-210ENST00000472697 PF4P02776 101 aa3.68□□□□□ -1.82
XRN1-210ENST00000472697 MCCD1P59942 119 aaPredicted RBP3.68□□□□□ -1.82
XRN1-210ENST00000472697 PLEKHG4Q58EX7 1191 aa3.68□□□□□ -1.82
XRN1-210ENST00000472697 ALKBH2Q6NS38 261 aa3.68□□□□□ -1.82
XRN1-210ENST00000472697 CCDC146Q8IYE0 955 aa3.68□□□□□ -1.82
XRN1-210ENST00000472697 MEN1O00255 615 aa3.67□□□□□ -1.82
XRN1-210ENST00000472697 PAX3P23760 479 aa3.67□□□□□ -1.82
XRN1-210ENST00000472697 IDH3AP50213 366 aa3.67□□□□□ -1.82
XRN1-210ENST00000472697 RTN1Q16799 776 aa3.67□□□□□ -1.82
XRN1-210ENST00000472697 FOXD4L6Q3SYB3 417 aaPredicted RBP3.67□□□□□ -1.82
XRN1-210ENST00000472697 SEZ6Q53EL9 994 aa3.67□□□□□ -1.82
XRN1-210ENST00000472697 RNF187Q5TA31 235 aaPredicted RBP3.67□□□□□ -1.82
XRN1-210ENST00000472697 FBXW10Q5XX13 1052 aa3.67□□□□□ -1.82
XRN1-210ENST00000472697 FOXD4L3Q6VB84 417 aaPredicted RBP3.67□□□□□ -1.82
XRN1-210ENST00000472697 APBB1IPQ7Z5R6 666 aaPredicted RBP3.67□□□□□ -1.82
XRN1-210ENST00000472697 ABTB2Q8N961 1025 aa3.67□□□□□ -1.82
XRN1-210ENST00000472697 EHBP1Q8NDI1 1231 aa3.67□□□□□ -1.82
XRN1-210ENST00000472697 SALL4Q9UJQ4 1053 aa3.67□□□□□ -1.82
XRN1-210ENST00000472697 PCDHB5Q9Y5E4 795 aa3.67□□□□□ -1.82
XRN1-210ENST00000472697 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.67□□□□□ -1.82
XRN1-210ENST00000472697 EID1Q9Y6B2 187 aa3.67□□□□□ -1.82
XRN1-210ENST00000472697 PLA2G4AP47712 749 aa3.67□□□□□ -1.82
XRN1-210ENST00000472697 LRRC69Q6ZNQ3 347 aa3.67□□□□□ -1.82
XRN1-210ENST00000472697 KRT25Q7Z3Z0 450 aa3.67□□□□□ -1.82
XRN1-210ENST00000472697 ZNF438Q7Z4V0 828 aa3.67□□□□□ -1.82
XRN1-210ENST00000472697 KIAA0907Q7Z7F0 614 aaPredicted RBP3.67□□□□□ -1.82
XRN1-210ENST00000472697 SKAP1Q86WV1 359 aa3.67□□□□□ -1.82
XRN1-210ENST00000472697 FBF1Q8TES7 1133 aa3.67□□□□□ -1.82
XRN1-210ENST00000472697 RHOVQ96L33 236 aa3.67□□□□□ -1.82
XRN1-210ENST00000472697 SPOCK3Q9BQ16 436 aa3.67□□□□□ -1.82
XRN1-210ENST00000472697 ESYT1Q9BSJ8 1104 aa3.67□□□□□ -1.82
XRN1-210ENST00000472697 CCDC8Q9H0W5 538 aaPredicted RBP3.67□□□□□ -1.82
XRN1-210ENST00000472697 ELP3Q9H9T3 547 aa3.67□□□□□ -1.82
XRN1-210ENST00000472697 RTCBQ9Y3I0 505 aaKnown RBP3.67□□□□□ -1.82
XRN1-210ENST00000472697 GADD45BO75293 160 aaPredicted RBP3.67□□□□□ -1.82
XRN1-210ENST00000472697 MYT1Q01538 1121 aa3.67□□□□□ -1.82
XRN1-210ENST00000472697 PTPN11Q06124 597 aaPredicted RBP3.67□□□□□ -1.82
XRN1-210ENST00000472697 NFX1Q12986 1120 aaKnown RBP3.67□□□□□ -1.82
XRN1-210ENST00000472697 YOD1Q5VVQ6 348 aaPredicted RBP3.67□□□□□ -1.82
XRN1-210ENST00000472697 LARP1BQ659C4 914 aaKnown RBP3.67□□□□□ -1.82
XRN1-210ENST00000472697 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.67□□□□□ -1.82
XRN1-210ENST00000472697 FERMT3Q86UX7 667 aa3.67□□□□□ -1.82
XRN1-210ENST00000472697 CCDC116Q8IYX3 515 aa3.67□□□□□ -1.82
XRN1-210ENST00000472697 ZCCHC2Q9C0B9 1178 aaKnown RBP3.67□□□□□ -1.82
XRN1-210ENST00000472697 FAM8A1Q9UBU6 413 aa3.67□□□□□ -1.82
XRN1-210ENST00000472697 PCDHB10Q9UN67 800 aa3.67□□□□□ -1.82
XRN1-210ENST00000472697 MAPK8IP1Q9UQF2 711 aa3.67□□□□□ -1.82
XRN1-210ENST00000472697 AKAP2Q9Y2D5 859 aa3.67□□□□□ -1.82
XRN1-210ENST00000472697 ENC1O14682 589 aa3.66□□□□□ -1.82
XRN1-210ENST00000472697 GRIN3BO60391 1043 aa3.66□□□□□ -1.82
XRN1-210ENST00000472697 KATNA1O75449 491 aa3.66□□□□□ -1.82
XRN1-210ENST00000472697 F13A1P00488 732 aa3.66□□□□□ -1.82
XRN1-210ENST00000472697 TFE3P19532 575 aaPredicted RBP3.66□□□□□ -1.82
XRN1-210ENST00000472697 IBSPP21815 317 aaPredicted RBP3.66□□□□□ -1.82
XRN1-210ENST00000472697 TARSP26639 723 aaKnown RBP3.66□□□□□ -1.82
XRN1-210ENST00000472697 GRIA4P48058 902 aa3.66□□□□□ -1.82
XRN1-210ENST00000472697 ZYXQ15942 572 aaKnown RBP3.66□□□□□ -1.82
XRN1-210ENST00000472697 NFE2L2Q16236 605 aa3.66□□□□□ -1.82
XRN1-210ENST00000472697 COL13A1Q5TAT6 717 aaPredicted RBP3.66□□□□□ -1.82
XRN1-210ENST00000472697 FOXB2Q5VYV0 432 aa3.66□□□□□ -1.82
XRN1-210ENST00000472697 RAB44Q7Z6P3 723 aaPredicted RBP3.66□□□□□ -1.82
XRN1-210ENST00000472697 STRA8Q7Z7C7 330 aa3.66□□□□□ -1.82
XRN1-210ENST00000472697 VPS37DQ86XT2 251 aa3.66□□□□□ -1.82
XRN1-210ENST00000472697 PHC3Q8NDX5 983 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms