RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 GPSM2P81274 684 aa17.8■□□□□ 0.44
BRCA1-211ENST00000472490 WASHC4Q2M389 1173 aa17.8■□□□□ 0.44
BRCA1-211ENST00000472490 KAZALD1Q96I82 304 aa17.8■□□□□ 0.44
BRCA1-211ENST00000472490 ANKRD2Q9GZV1 360 aa17.8■□□□□ 0.44
BRCA1-211ENST00000472490 GGA1Q9UJY5 639 aa17.8■□□□□ 0.44
BRCA1-211ENST00000472490 FER1L6Q2WGJ9 1857 aa17.8■□□□□ 0.44
BRCA1-211ENST00000472490 GLTPD2A6NH11 291 aa17.79■□□□□ 0.44
BRCA1-211ENST00000472490 KIAA2012Q0VF49 1180 aa17.79■□□□□ 0.44
BRCA1-211ENST00000472490 NIM1KQ8IY84 436 aa17.79■□□□□ 0.44
BRCA1-211ENST00000472490 ZNF526Q8TF50 670 aaPredicted RBP17.79■□□□□ 0.44
BRCA1-211ENST00000472490 MINPP1Q9UNW1 487 aa17.79■□□□□ 0.44
BRCA1-211ENST00000472490 ATP2B4P23634 1241 aa17.78■□□□□ 0.44
BRCA1-211ENST00000472490 AOC3Q16853 763 aa17.78■□□□□ 0.44
BRCA1-211ENST00000472490 LDHAL6AQ6ZMR3 332 aa17.78■□□□□ 0.44
BRCA1-211ENST00000472490 TMEM57Q8N5G2 664 aa17.78■□□□□ 0.44
BRCA1-211ENST00000472490 MEIS3Q99687 375 aa17.78■□□□□ 0.44
BRCA1-211ENST00000472490 ZC3H12CQ9C0D7 883 aaKnown RBP17.78■□□□□ 0.44
BRCA1-211ENST00000472490 UFL1O94874 794 aa17.77■□□□□ 0.44
BRCA1-211ENST00000472490 EIF6P56537 245 aaKnown RBP17.77■□□□□ 0.44
BRCA1-211ENST00000472490 SLC51AQ86UW1 340 aa17.77■□□□□ 0.44
BRCA1-211ENST00000472490 ITPRIPQ8IWB1 547 aa17.77■□□□□ 0.44
BRCA1-211ENST00000472490 TBC1D16Q8TBP0 767 aa17.77■□□□□ 0.44
BRCA1-211ENST00000472490 CNNM1Q9NRU3 951 aa17.77■□□□□ 0.44
BRCA1-211ENST00000472490 POLLQ9UGP5 575 aa17.77■□□□□ 0.44
BRCA1-211ENST00000472490 G3V3G9 751 aa17.76■□□□□ 0.43
BRCA1-211ENST00000472490 FZD9O00144 591 aa17.76■□□□□ 0.43
BRCA1-211ENST00000472490 DCAF8Q5TAQ9 597 aa17.76■□□□□ 0.43
BRCA1-211ENST00000472490 ANKRD44Q8N8A2 993 aa17.76■□□□□ 0.43
BRCA1-211ENST00000472490 LEMD3Q9Y2U8 911 aa17.76■□□□□ 0.43
BRCA1-211ENST00000472490 LRRC37AA6NMS7 1700 aa17.75■□□□□ 0.43
BRCA1-211ENST00000472490 GNAI2P04899 355 aa17.75■□□□□ 0.43
BRCA1-211ENST00000472490 KCNJ4P48050 445 aa17.75■□□□□ 0.43
BRCA1-211ENST00000472490 CHMP4BQ9H444 224 aaKnown RBP17.75■□□□□ 0.43
BRCA1-211ENST00000472490 ZNRF3Q9ULT6 936 aa17.75■□□□□ 0.43
BRCA1-211ENST00000472490 TNNQ9UQP3 1299 aa17.75■□□□□ 0.43
BRCA1-211ENST00000472490 LRRFIP2Q9Y608 721 aaKnown RBP17.75■□□□□ 0.43
BRCA1-211ENST00000472490 MYH3P11055 1940 aa17.74■□□□□ 0.43
BRCA1-211ENST00000472490 CHRNDQ07001 517 aa17.74■□□□□ 0.43
BRCA1-211ENST00000472490 RIMBP2O15034 1052 aa17.73■□□□□ 0.43
BRCA1-211ENST00000472490 GPC2Q8N158 579 aa17.73■□□□□ 0.43
BRCA1-211ENST00000472490 ZNF594Q96JF6 807 aaPredicted RBP17.73■□□□□ 0.43
BRCA1-211ENST00000472490 COL4A1P02462 1669 aa17.73■□□□□ 0.43
BRCA1-211ENST00000472490 MROH5Q6ZUA9 1318 aa17.72■□□□□ 0.43
BRCA1-211ENST00000472490 SBF1O95248 1867 aa17.72■□□□□ 0.43
BRCA1-211ENST00000472490 RLBP1P12271 317 aa17.72■□□□□ 0.43
BRCA1-211ENST00000472490 FBXO3Q9UK99 471 aa17.72■□□□□ 0.43
BRCA1-211ENST00000472490 ZNF804BA4D1E1 1349 aa17.72■□□□□ 0.43
BRCA1-211ENST00000472490 DUOX1Q9NRD9 1551 aa17.71■□□□□ 0.43
BRCA1-211ENST00000472490 MED23Q9ULK4 1368 aa17.71■□□□□ 0.43
BRCA1-211ENST00000472490 IQCA1LA6NCM1 817 aa17.71■□□□□ 0.43
BRCA1-211ENST00000472490 ZBTB7BO15156 539 aaPredicted RBP17.71■□□□□ 0.43
BRCA1-211ENST00000472490 DDNO94850 711 aaPredicted RBP17.71■□□□□ 0.43
BRCA1-211ENST00000472490 VEGFAP15692 232 aaPredicted RBP17.71■□□□□ 0.43
BRCA1-211ENST00000472490 PDE3AQ14432 1141 aa17.71■□□□□ 0.43
BRCA1-211ENST00000472490 TNIP1Q15025 636 aa17.71■□□□□ 0.43
BRCA1-211ENST00000472490 C16orf71Q8IYS4 520 aaPredicted RBP17.71■□□□□ 0.43
BRCA1-211ENST00000472490 PANK1Q8TE04 598 aa17.71■□□□□ 0.43
BRCA1-211ENST00000472490 DDX19BQ9UMR2 479 aa17.71■□□□□ 0.43
BRCA1-211ENST00000472490 TAF1P21675 1872 aa17.7■□□□□ 0.42
BRCA1-211ENST00000472490 SRGAP3O43295 1099 aa17.7■□□□□ 0.42
BRCA1-211ENST00000472490 MTX1Q13505 466 aa17.7■□□□□ 0.42
BRCA1-211ENST00000472490 RIPOR2Q9Y4F9 1068 aa17.7■□□□□ 0.42
BRCA1-211ENST00000472490 ZNF541Q9H0D2 1346 aa17.7■□□□□ 0.42
BRCA1-211ENST00000472490 TIAM2Q8IVF5 1701 aa17.69■□□□□ 0.42
BRCA1-211ENST00000472490 PLIN1O60240 522 aa17.69■□□□□ 0.42
BRCA1-211ENST00000472490 ECE2O60344 883 aa17.69■□□□□ 0.42
BRCA1-211ENST00000472490 MVPQ14764 893 aaKnown RBP17.69■□□□□ 0.42
BRCA1-211ENST00000472490 METTL24Q5JXM2 366 aa17.69■□□□□ 0.42
BRCA1-211ENST00000472490 CIAPIN1Q6FI81 312 aa17.69■□□□□ 0.42
BRCA1-211ENST00000472490 PODNQ7Z5L7 613 aa17.69■□□□□ 0.42
BRCA1-211ENST00000472490 L3MBTL3Q96JM7 780 aaPredicted RBP17.69■□□□□ 0.42
BRCA1-211ENST00000472490 DBNDD1Q9H9R9 158 aa17.69■□□□□ 0.42
BRCA1-211ENST00000472490 RRAGCQ9HB90 399 aa17.69■□□□□ 0.42
BRCA1-211ENST00000472490 NMRK2Q9NPI5 230 aa17.69■□□□□ 0.42
BRCA1-211ENST00000472490 GJA3Q9Y6H8 435 aa17.69■□□□□ 0.42
BRCA1-211ENST00000472490 EYA2O00167 538 aa17.68■□□□□ 0.42
BRCA1-211ENST00000472490 TAF5LO75529 589 aa17.68■□□□□ 0.42
BRCA1-211ENST00000472490 CIAO1O76071 339 aa17.68■□□□□ 0.42
BRCA1-211ENST00000472490 RFX5P48382 616 aaPredicted RBP17.68■□□□□ 0.42
BRCA1-211ENST00000472490 PTPN12Q05209 780 aaKnown RBP17.68■□□□□ 0.42
BRCA1-211ENST00000472490 UBE4AQ14139 1066 aa17.68■□□□□ 0.42
BRCA1-211ENST00000472490 DOK7Q18PE1 504 aa17.68■□□□□ 0.42
BRCA1-211ENST00000472490 GPR101Q96P66 508 aaPredicted RBP17.68■□□□□ 0.42
BRCA1-211ENST00000472490 COA1Q9GZY4 146 aa17.68■□□□□ 0.42
BRCA1-211ENST00000472490 LMOD1P29536 600 aaPredicted RBP17.67■□□□□ 0.42
BRCA1-211ENST00000472490 CXCL9Q07325 125 aa17.67■□□□□ 0.42
BRCA1-211ENST00000472490 C15orf52Q6ZUT6 534 aaKnown RBP17.67■□□□□ 0.42
BRCA1-211ENST00000472490 HELBQ8NG08 1087 aaPredicted RBP17.67■□□□□ 0.42
BRCA1-211ENST00000472490 KLHDC4Q8TBB5 520 aa17.67■□□□□ 0.42
BRCA1-211ENST00000472490 PUS3Q9BZE2 481 aaKnown RBP17.67■□□□□ 0.42
BRCA1-211ENST00000472490 COPRSQ9NQ92 184 aa17.67■□□□□ 0.42
BRCA1-211ENST00000472490 LTBP1Q14766 1721 aa17.67■□□□□ 0.42
BRCA1-211ENST00000472490 DICER1Q9UPY3 1922 aaKnown RBP17.66■□□□□ 0.42
BRCA1-211ENST00000472490 KIF3CO14782 793 aa17.66■□□□□ 0.42
BRCA1-211ENST00000472490 PDE8BO95263 885 aa17.66■□□□□ 0.42
BRCA1-211ENST00000472490 LRRC24Q50LG9 513 aa17.66■□□□□ 0.42
BRCA1-211ENST00000472490 COG6Q9Y2V7 657 aa17.66■□□□□ 0.42
BRCA1-211ENST00000472490 COL4A5P29400 1685 aa17.66■□□□□ 0.42
BRCA1-211ENST00000472490 YDJCA8MPS7 323 aa17.65■□□□□ 0.42
BRCA1-211ENST00000472490 RAD17O75943 681 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms