RNA–Protein interactions for RNA: ENST00000472129.3

CLTC-204, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-204ENST00000472129 OR13H1Q8NG92 308 aa8.85□□□□□ -0.99
CLTC-204ENST00000472129 TUT1Q9H6E5 874 aaKnown RBP8.85□□□□□ -0.99
CLTC-204ENST00000472129 ELP3Q9H9T3 547 aa8.85□□□□□ -0.99
CLTC-204ENST00000472129 EGFL7Q9UHF1 273 aa8.85□□□□□ -0.99
CLTC-204ENST00000472129 LOC102724428A0A0B4J2F2 783 aa8.84□□□□□ -0.99
CLTC-204ENST00000472129 RGS9O75916 674 aaPredicted RBP8.84□□□□□ -0.99
CLTC-204ENST00000472129 AFF1P51825 1210 aaKnown RBP8.84□□□□□ -0.99
CLTC-204ENST00000472129 SIK1P57059 783 aa8.84□□□□□ -0.99
CLTC-204ENST00000472129 TTC39BQ5VTQ0 682 aaPredicted RBP8.84□□□□□ -0.99
CLTC-204ENST00000472129 ELMSAN1Q6PJG2 1045 aa8.84□□□□□ -0.99
CLTC-204ENST00000472129 ZNF438Q7Z4V0 828 aa8.84□□□□□ -0.99
CLTC-204ENST00000472129 ABI2Q9NYB9 513 aaPredicted RBP8.84□□□□□ -0.99
CLTC-204ENST00000472129 CNTN3Q9P232 1028 aa8.84□□□□□ -0.99
CLTC-204ENST00000472129 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.84□□□□□ -0.99
CLTC-204ENST00000472129 PIK3R2O00459 728 aa8.83□□□□□ -1
CLTC-204ENST00000472129 EIF2AK2P19525 551 aaKnown RBP8.83□□□□□ -1
CLTC-204ENST00000472129 SOX18P35713 384 aa8.83□□□□□ -1
CLTC-204ENST00000472129 PDE12Q6L8Q7 609 aaKnown RBP8.83□□□□□ -1
CLTC-204ENST00000472129 GLYCTKQ8IVS8 523 aa8.83□□□□□ -1
CLTC-204ENST00000472129 SMG9Q9H0W8 520 aaKnown RBP8.83□□□□□ -1
CLTC-204ENST00000472129 C1QTNF9BB2RNN3 333 aa8.82□□□□□ -1
CLTC-204ENST00000472129 FAM229AH3BQW9 127 aa8.82□□□□□ -1
CLTC-204ENST00000472129 HOXD8P13378 290 aaPredicted RBP8.82□□□□□ -1
CLTC-204ENST00000472129 PCSK2P16519 638 aa8.82□□□□□ -1
CLTC-204ENST00000472129 GRIK5Q16478 980 aa8.82□□□□□ -1
CLTC-204ENST00000472129 Q8N3U1 123 aa8.82□□□□□ -1
CLTC-204ENST00000472129 NOP53Q9NZM5 478 aaKnown RBP8.82□□□□□ -1
CLTC-204ENST00000472129 BRD1O95696 1058 aa8.81□□□□□ -1
CLTC-204ENST00000472129 ARHGAP4P98171 946 aa8.81□□□□□ -1
CLTC-204ENST00000472129 XKR5Q6UX68 686 aa8.81□□□□□ -1
CLTC-204ENST00000472129 CD163Q86VB7 1156 aa8.81□□□□□ -1
CLTC-204ENST00000472129 C1orf127Q8N9H9 656 aa8.81□□□□□ -1
CLTC-204ENST00000472129 FRRS1LQ9P0K9 344 aa8.81□□□□□ -1
CLTC-204ENST00000472129 RPLP1P05386 114 aaKnown RBP8.8□□□□□ -1
CLTC-204ENST00000472129 CHRNA4P43681 627 aa8.8□□□□□ -1
CLTC-204ENST00000472129 TRAPPC3LQ5T215 181 aa8.8□□□□□ -1
CLTC-204ENST00000472129 TTC16Q8NEE8 873 aa8.8□□□□□ -1
CLTC-204ENST00000472129 CCER1Q8TC90 406 aaPredicted RBP8.8□□□□□ -1
CLTC-204ENST00000472129 PLD4Q96BZ4 506 aa8.8□□□□□ -1
CLTC-204ENST00000472129 KANSL3Q9P2N6 904 aa8.8□□□□□ -1
CLTC-204ENST00000472129 GHRHP01286 108 aa8.79□□□□□ -1
CLTC-204ENST00000472129 DMRTC2Q8IXT2 367 aaPredicted RBP8.79□□□□□ -1
CLTC-204ENST00000472129 ATP11AP98196 1134 aa8.78□□□□□ -1
CLTC-204ENST00000472129 HYAL2Q12891 473 aa8.78□□□□□ -1
CLTC-204ENST00000472129 ILDR2Q71H61 639 aa8.78□□□□□ -1
CLTC-204ENST00000472129 GJD3Q8N144 294 aa8.78□□□□□ -1
CLTC-204ENST00000472129 TTC9Q92623 222 aa8.78□□□□□ -1
CLTC-204ENST00000472129 CHRDQ9H2X0 955 aa8.78□□□□□ -1
CLTC-204ENST00000472129 TNFRSF21O75509 655 aa8.77□□□□□ -1.01
CLTC-204ENST00000472129 USP5P45974 858 aa8.77□□□□□ -1.01
CLTC-204ENST00000472129 MSL1Q68DK7 614 aa8.77□□□□□ -1.01
CLTC-204ENST00000472129 GDF6Q6KF10 455 aaPredicted RBP8.77□□□□□ -1.01
CLTC-204ENST00000472129 FOXD3Q9UJU5 478 aaPredicted RBP8.77□□□□□ -1.01
CLTC-204ENST00000472129 TRIM33Q9UPN9 1127 aa8.77□□□□□ -1.01
CLTC-204ENST00000472129 GNEQ9Y223 722 aaKnown RBP8.77□□□□□ -1.01
CLTC-204ENST00000472129 SOWAHDA6NJG2 315 aa8.76□□□□□ -1.01
CLTC-204ENST00000472129 KIF4AO95239 1232 aa8.76□□□□□ -1.01
CLTC-204ENST00000472129 CES1P23141 567 aa8.76□□□□□ -1.01
CLTC-204ENST00000472129 ITGB7P26010 798 aa8.76□□□□□ -1.01
CLTC-204ENST00000472129 TRIM28Q13263 835 aaKnown RBP8.76□□□□□ -1.01
CLTC-204ENST00000472129 NCAPG2Q86XI2 1143 aa8.76□□□□□ -1.01
CLTC-204ENST00000472129 KRTAP4-8Q9BYQ9 185 aa8.76□□□□□ -1.01
CLTC-204ENST00000472129 BRPF3Q9ULD4 1205 aa8.76□□□□□ -1.01
CLTC-204ENST00000472129 A0A0A0MRY4 1105 aa8.75□□□□□ -1.01
CLTC-204ENST00000472129 SPDYE3A6NKU9 549 aa8.75□□□□□ -1.01
CLTC-204ENST00000472129 SPATA31C1P0DKV0 1188 aa8.75□□□□□ -1.01
CLTC-204ENST00000472129 ACPPP15309 386 aa8.75□□□□□ -1.01
CLTC-204ENST00000472129 GRIK4Q16099 956 aa8.75□□□□□ -1.01
CLTC-204ENST00000472129 PRRT3Q5FWE3 981 aa8.75□□□□□ -1.01
CLTC-204ENST00000472129 ADAMTSL4Q6UY14 1074 aa8.75□□□□□ -1.01
CLTC-204ENST00000472129 CEP120Q8N960 986 aa8.75□□□□□ -1.01
CLTC-204ENST00000472129 SPACA7Q96KW9 195 aa8.75□□□□□ -1.01
CLTC-204ENST00000472129 RBSNQ9H1K0 784 aa8.75□□□□□ -1.01
CLTC-204ENST00000472129 RASSF4Q9H2L5 321 aa8.75□□□□□ -1.01
CLTC-204ENST00000472129 SALL4Q9UJQ4 1053 aa8.75□□□□□ -1.01
CLTC-204ENST00000472129 EREGO14944 169 aa8.74□□□□□ -1.01
CLTC-204ENST00000472129 EHHADHQ08426 723 aa8.74□□□□□ -1.01
CLTC-204ENST00000472129 WFDC8Q8IUA0 241 aa8.74□□□□□ -1.01
CLTC-204ENST00000472129 TRAIPQ9BWF2 469 aa8.74□□□□□ -1.01
CLTC-204ENST00000472129 PHACTR2O75167 634 aa8.73□□□□□ -1.01
CLTC-204ENST00000472129 TRPA1O75762 1119 aa8.73□□□□□ -1.01
CLTC-204ENST00000472129 CEP135Q66GS9 1140 aa8.73□□□□□ -1.01
CLTC-204ENST00000472129 IL22RA1Q8N6P7 574 aa8.73□□□□□ -1.01
CLTC-204ENST00000472129 IVNS1ABPQ9Y6Y0 642 aa8.73□□□□□ -1.01
CLTC-204ENST00000472129 FMR1NBQ8N0W7 255 aaPredicted RBP8.72□□□□□ -1.01
CLTC-204ENST00000472129 SNX29Q8TEQ0 813 aa8.72□□□□□ -1.01
CLTC-204ENST00000472129 PBX4Q9BYU1 374 aa8.72□□□□□ -1.01
CLTC-204ENST00000472129 LACRTQ9GZZ8 138 aa8.72□□□□□ -1.01
CLTC-204ENST00000472129 BIN2Q9UBW5 565 aaPredicted RBP8.72□□□□□ -1.01
CLTC-204ENST00000472129 NDUFB5O43674 189 aa8.71□□□□□ -1.02
CLTC-204ENST00000472129 RAC1P63000 192 aa8.71□□□□□ -1.02
CLTC-204ENST00000472129 DOC2BQ14184 412 aa8.71□□□□□ -1.02
CLTC-204ENST00000472129 SHISA2Q6UWI4 295 aa8.71□□□□□ -1.02
CLTC-204ENST00000472129 HHIPQ96QV1 700 aa8.71□□□□□ -1.02
CLTC-204ENST00000472129 POP1Q99575 1024 aaKnown RBP8.71□□□□□ -1.02
CLTC-204ENST00000472129 NFKBIEO00221 500 aa8.7□□□□□ -1.02
CLTC-204ENST00000472129 DEAF1O75398 565 aaPredicted RBP8.7□□□□□ -1.02
CLTC-204ENST00000472129 SMNDC1O75940 238 aaKnown RBP eCLIP8.7□□□□□ -1.02
CLTC-204ENST00000472129 POLR3DP05423 398 aaPredicted RBP8.7□□□□□ -1.02
CLTC-204ENST00000472129 PMEPA1Q969W9 287 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms