RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 RBSNQ9H1K0 784 aa9.4□□□□□ -0.9
HDAC9-221ENST00000471887 CNTN3Q9P232 1028 aa9.4□□□□□ -0.9
HDAC9-221ENST00000471887 MKL2Q9ULH7 1088 aa9.4□□□□□ -0.9
HDAC9-221ENST00000471887 PIK3R2O00459 728 aa9.39□□□□□ -0.91
HDAC9-221ENST00000471887 PHACTR2O75167 634 aa9.39□□□□□ -0.91
HDAC9-221ENST00000471887 GHRHP01286 108 aa9.39□□□□□ -0.91
HDAC9-221ENST00000471887 HOXB4P17483 251 aaPredicted RBP9.39□□□□□ -0.91
HDAC9-221ENST00000471887 CES1P23141 567 aa9.39□□□□□ -0.91
HDAC9-221ENST00000471887 C20orf204Q6ZNR8 217 aa9.39□□□□□ -0.91
HDAC9-221ENST00000471887 SND1Q7KZF4 910 aaKnown RBP eCLIP9.39□□□□□ -0.91
HDAC9-221ENST00000471887 MICALL1Q8N3F8 863 aa9.39□□□□□ -0.91
HDAC9-221ENST00000471887 C1orf127Q8N9H9 656 aa9.39□□□□□ -0.91
HDAC9-221ENST00000471887 SPACA7Q96KW9 195 aa9.39□□□□□ -0.91
HDAC9-221ENST00000471887 DMRTB1Q96MA1 342 aa9.39□□□□□ -0.91
HDAC9-221ENST00000471887 FRRS1LQ9P0K9 344 aa9.39□□□□□ -0.91
HDAC9-221ENST00000471887 J3QW42 95 aa9.38□□□□□ -0.91
HDAC9-221ENST00000471887 RNF225M0QZC1 329 aaPredicted RBP9.38□□□□□ -0.91
HDAC9-221ENST00000471887 LILRB5O75023 590 aa9.38□□□□□ -0.91
HDAC9-221ENST00000471887 RGS9O75916 674 aaPredicted RBP9.38□□□□□ -0.91
HDAC9-221ENST00000471887 CYP2E1P05181 493 aaPredicted RBP9.38□□□□□ -0.91
HDAC9-221ENST00000471887 NEFLP07196 543 aa9.38□□□□□ -0.91
HDAC9-221ENST00000471887 PERM1Q5SV97 790 aa9.38□□□□□ -0.91
HDAC9-221ENST00000471887 NCAPG2Q86XI2 1143 aa9.38□□□□□ -0.91
HDAC9-221ENST00000471887 NUDT8Q8WV74 236 aa9.38□□□□□ -0.91
HDAC9-221ENST00000471887 JPH1Q9HDC5 661 aaPredicted RBP9.38□□□□□ -0.91
HDAC9-221ENST00000471887 PRDM6Q9NQX0 595 aa9.38□□□□□ -0.91
HDAC9-221ENST00000471887 FOXD3Q9UJU5 478 aaPredicted RBP9.38□□□□□ -0.91
HDAC9-221ENST00000471887 CNTNAP5Q8WYK1 1306 aa9.37□□□□□ -0.91
HDAC9-221ENST00000471887 KIF4AO95239 1232 aa9.37□□□□□ -0.91
HDAC9-221ENST00000471887 LPIN3Q9BQK8 851 aa9.37□□□□□ -0.91
HDAC9-221ENST00000471887 CHRDQ9H2X0 955 aa9.37□□□□□ -0.91
HDAC9-221ENST00000471887 KANSL3Q9P2N6 904 aa9.37□□□□□ -0.91
HDAC9-221ENST00000471887 GNB5O14775 395 aa9.36□□□□□ -0.91
HDAC9-221ENST00000471887 COL13A1Q5TAT6 717 aaPredicted RBP9.36□□□□□ -0.91
HDAC9-221ENST00000471887 LINC00114Q6XXX2 140 aa9.36□□□□□ -0.91
HDAC9-221ENST00000471887 TMC7Q7Z402 723 aa9.36□□□□□ -0.91
HDAC9-221ENST00000471887 ZBTB7CA1YPR0 619 aa9.35□□□□□ -0.91
HDAC9-221ENST00000471887 GPR182O15218 404 aa9.35□□□□□ -0.91
HDAC9-221ENST00000471887 C8orf86Q6ZUL3 223 aa9.35□□□□□ -0.91
HDAC9-221ENST00000471887 ZSCAN29Q8IWY8 852 aaPredicted RBP9.35□□□□□ -0.91
HDAC9-221ENST00000471887 TTC9Q92623 222 aa9.35□□□□□ -0.91
HDAC9-221ENST00000471887 ALKBH8Q96BT7 664 aaKnown RBP9.35□□□□□ -0.91
HDAC9-221ENST00000471887 PLD4Q96BZ4 506 aa9.35□□□□□ -0.91
HDAC9-221ENST00000471887 SMG9Q9H0W8 520 aaKnown RBP9.35□□□□□ -0.91
HDAC9-221ENST00000471887 SALL4Q9UJQ4 1053 aa9.35□□□□□ -0.91
HDAC9-221ENST00000471887 IGHA2P01877 340 aa9.34□□□□□ -0.91
HDAC9-221ENST00000471887 NIF3L1Q9GZT8 377 aa9.34□□□□□ -0.91
HDAC9-221ENST00000471887 GZF1Q9H116 711 aaPredicted RBP9.34□□□□□ -0.91
HDAC9-221ENST00000471887 ZFYVE28Q9HCC9 887 aa9.34□□□□□ -0.91
HDAC9-221ENST00000471887 AMOTL2Q9Y2J4 779 aa9.34□□□□□ -0.91
HDAC9-221ENST00000471887 EREGO14944 169 aa9.33□□□□□ -0.92
HDAC9-221ENST00000471887 AFF1P51825 1210 aaKnown RBP9.33□□□□□ -0.92
HDAC9-221ENST00000471887 CEP120Q8N960 986 aa9.33□□□□□ -0.92
HDAC9-221ENST00000471887 EDN3P14138 238 aa9.32□□□□□ -0.92
HDAC9-221ENST00000471887 ORC1Q13415 861 aa9.32□□□□□ -0.92
HDAC9-221ENST00000471887 ASB16Q96NS5 453 aa9.32□□□□□ -0.92
HDAC9-221ENST00000471887 NOP53Q9NZM5 478 aaKnown RBP9.32□□□□□ -0.92
HDAC9-221ENST00000471887 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.32□□□□□ -0.92
HDAC9-221ENST00000471887 SPDYE3A6NKU9 549 aa9.31□□□□□ -0.92
HDAC9-221ENST00000471887 CPNE3O75131 537 aaKnown RBP9.31□□□□□ -0.92
HDAC9-221ENST00000471887 SMNDC1O75940 238 aaKnown RBP eCLIP9.31□□□□□ -0.92
HDAC9-221ENST00000471887 NID1P14543 1247 aa9.31□□□□□ -0.92
HDAC9-221ENST00000471887 ATP11AP98196 1134 aa9.31□□□□□ -0.92
HDAC9-221ENST00000471887 COL9A3Q14050 684 aaPredicted RBP9.31□□□□□ -0.92
HDAC9-221ENST00000471887 TRIM11Q96F44 468 aa9.31□□□□□ -0.92
HDAC9-221ENST00000471887 DNAJC25Q9H1X3 360 aa9.31□□□□□ -0.92
HDAC9-221ENST00000471887 TREHO43280 583 aa9.3□□□□□ -0.92
HDAC9-221ENST00000471887 IRS1P35568 1242 aa9.3□□□□□ -0.92
HDAC9-221ENST00000471887 CEP135Q66GS9 1140 aa9.3□□□□□ -0.92
HDAC9-221ENST00000471887 PLVAPQ9BX97 442 aa9.3□□□□□ -0.92
HDAC9-221ENST00000471887 PBX4Q9BYU1 374 aa9.3□□□□□ -0.92
HDAC9-221ENST00000471887 RASSF4Q9H2L5 321 aa9.3□□□□□ -0.92
HDAC9-221ENST00000471887 EIF1AYO14602 144 aaKnown RBP9.29□□□□□ -0.92
HDAC9-221ENST00000471887 PLCB3Q01970 1234 aa9.29□□□□□ -0.92
HDAC9-221ENST00000471887 GRIK5Q16478 980 aa9.29□□□□□ -0.92
HDAC9-221ENST00000471887 POLR3DP05423 398 aaPredicted RBP9.28□□□□□ -0.92
HDAC9-221ENST00000471887 KCNMA1Q12791 1236 aa9.28□□□□□ -0.92
HDAC9-221ENST00000471887 DSC3Q14574 896 aa9.28□□□□□ -0.92
HDAC9-221ENST00000471887 TRAPPC3LQ5T215 181 aa9.28□□□□□ -0.92
HDAC9-221ENST00000471887 MSL1Q68DK7 614 aa9.28□□□□□ -0.92
HDAC9-221ENST00000471887 GDF6Q6KF10 455 aaPredicted RBP9.28□□□□□ -0.92
HDAC9-221ENST00000471887 GALNT12Q8IXK2 581 aa9.28□□□□□ -0.92
HDAC9-221ENST00000471887 CACTIN-AS1Q8N1I8 211 aa9.28□□□□□ -0.92
HDAC9-221ENST00000471887 CSRNP1Q96S65 589 aa9.28□□□□□ -0.92
HDAC9-221ENST00000471887 SUV39H2Q9H5I1 410 aa9.28□□□□□ -0.92
HDAC9-221ENST00000471887 DZANK1Q9NVP4 752 aa9.28□□□□□ -0.92
HDAC9-221ENST00000471887 ACPPP15309 386 aa9.27□□□□□ -0.93
HDAC9-221ENST00000471887 CCDC27Q2M243 656 aa9.27□□□□□ -0.93
HDAC9-221ENST00000471887 USPL1Q5W0Q7 1092 aa9.27□□□□□ -0.93
HDAC9-221ENST00000471887 WFDC8Q8IUA0 241 aa9.27□□□□□ -0.93
HDAC9-221ENST00000471887 OSMRQ99650 979 aa9.27□□□□□ -0.93
HDAC9-221ENST00000471887 TRIM33Q9UPN9 1127 aa9.27□□□□□ -0.93
HDAC9-221ENST00000471887 ALYREFQ86V81 257 aaKnown RBP9.26□□□□□ -0.93
HDAC9-221ENST00000471887 ZKSCAN3Q9BRR0 538 aa9.26□□□□□ -0.93
HDAC9-221ENST00000471887 FAM177BA6PVY3 158 aa9.25□□□□□ -0.93
HDAC9-221ENST00000471887 NFKBIEO00221 500 aa9.25□□□□□ -0.93
HDAC9-221ENST00000471887 PEAR1Q5VY43 1037 aaPredicted RBP9.25□□□□□ -0.93
HDAC9-221ENST00000471887 DMRTC2Q8IXT2 367 aaPredicted RBP9.25□□□□□ -0.93
HDAC9-221ENST00000471887 IL22RA1Q8N6P7 574 aa9.25□□□□□ -0.93
HDAC9-221ENST00000471887 TMEM102Q8N9M5 508 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms