RNA–Protein interactions for RNA: ENST00000471572.6

NF1-208, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 2,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-208ENST00000471572 SRRTQ9BXP5 876 aaKnown RBP8.22□□□□□ -1.09
NF1-208ENST00000471572 FHDC1Q9C0D6 1143 aaPredicted RBP8.22□□□□□ -1.09
NF1-208ENST00000471572 TMEM63CQ9P1W3 806 aa8.22□□□□□ -1.09
NF1-208ENST00000471572 PDPK1O15530 556 aa8.21□□□□□ -1.1
NF1-208ENST00000471572 RPLP1P05386 114 aaKnown RBP8.21□□□□□ -1.1
NF1-208ENST00000471572 SKOR1P84550 965 aa8.21□□□□□ -1.1
NF1-208ENST00000471572 PWP1Q13610 501 aa8.21□□□□□ -1.1
NF1-208ENST00000471572 COL9A2Q14055 689 aaPredicted RBP8.21□□□□□ -1.1
NF1-208ENST00000471572 ARID5BQ14865 1188 aa8.21□□□□□ -1.1
NF1-208ENST00000471572 BRDTQ58F21 947 aaPredicted RBP8.21□□□□□ -1.1
NF1-208ENST00000471572 CHRDQ9H2X0 955 aa8.21□□□□□ -1.1
NF1-208ENST00000471572 SCUBE2Q9NQ36 999 aa8.21□□□□□ -1.1
NF1-208ENST00000471572 TLR6Q9Y2C9 796 aa8.21□□□□□ -1.1
NF1-208ENST00000471572 ABCC9O60706 1549 aa8.21□□□□□ -1.1
NF1-208ENST00000471572 GADD45BO75293 160 aaPredicted RBP8.2□□□□□ -1.1
NF1-208ENST00000471572 FBXO24O75426 580 aa8.2□□□□□ -1.1
NF1-208ENST00000471572 S1PR4O95977 384 aa8.2□□□□□ -1.1
NF1-208ENST00000471572 GSTT1P30711 240 aa8.2□□□□□ -1.1
NF1-208ENST00000471572 TXLNAP40222 546 aa8.2□□□□□ -1.1
NF1-208ENST00000471572 RASGRF1Q13972 1273 aa8.2□□□□□ -1.1
NF1-208ENST00000471572 MAP3K11Q16584 847 aa8.2□□□□□ -1.1
NF1-208ENST00000471572 TAF7LQ5H9L4 462 aa8.2□□□□□ -1.1
NF1-208ENST00000471572 C1orf53Q5VUE5 145 aa8.2□□□□□ -1.1
NF1-208ENST00000471572 TSHZ1Q6ZSZ6 1077 aa8.2□□□□□ -1.1
NF1-208ENST00000471572 NBPF15Q8N660 670 aa8.2□□□□□ -1.1
NF1-208ENST00000471572 KDF1Q8NAX2 398 aaPredicted RBP8.2□□□□□ -1.1
NF1-208ENST00000471572 MAPK8IP1Q9UQF2 711 aa8.2□□□□□ -1.1
NF1-208ENST00000471572 PHACTR2O75167 634 aa8.2□□□□□ -1.1
NF1-208ENST00000471572 VARSP26640 1264 aaKnown RBP8.2□□□□□ -1.1
NF1-208ENST00000471572 EXOSC10Q01780 885 aaKnown RBP8.2□□□□□ -1.1
NF1-208ENST00000471572 IFRD2Q12894 506 aaPredicted RBP8.2□□□□□ -1.1
NF1-208ENST00000471572 SEPT6Q14141 434 aa8.2□□□□□ -1.1
NF1-208ENST00000471572 C2orf27AQ580R0 203 aa8.2□□□□□ -1.1
NF1-208ENST00000471572 PPP1R26Q5T8A7 1209 aaPredicted RBP8.2□□□□□ -1.1
NF1-208ENST00000471572 KRT26Q7Z3Y9 468 aa8.2□□□□□ -1.1
NF1-208ENST00000471572 ZNF438Q7Z4V0 828 aa8.2□□□□□ -1.1
NF1-208ENST00000471572 ZNF516Q92618 1163 aa8.2□□□□□ -1.1
NF1-208ENST00000471572 SUV39H2Q9H5I1 410 aa8.2□□□□□ -1.1
NF1-208ENST00000471572 ATP8A1Q9Y2Q0 1164 aa8.2□□□□□ -1.1
NF1-208ENST00000471572 EREGO14944 169 aa8.19□□□□□ -1.1
NF1-208ENST00000471572 PRPF40BQ6NWY9 871 aaKnown RBP8.19□□□□□ -1.1
NF1-208ENST00000471572 PHC3Q8NDX5 983 aa8.19□□□□□ -1.1
NF1-208ENST00000471572 CD2APQ9Y5K6 639 aa8.19□□□□□ -1.1
NF1-208ENST00000471572 KCNQ2O43526 872 aa8.19□□□□□ -1.1
NF1-208ENST00000471572 TRIM37O94972 964 aa8.19□□□□□ -1.1
NF1-208ENST00000471572 PAX3P23760 479 aa8.19□□□□□ -1.1
NF1-208ENST00000471572 DHX9Q08211 1270 aaKnown RBP8.19□□□□□ -1.1
NF1-208ENST00000471572 RALBP1Q15311 655 aa8.19□□□□□ -1.1
NF1-208ENST00000471572 GALNT12Q8IXK2 581 aa8.19□□□□□ -1.1
NF1-208ENST00000471572 ZNF687Q8N1G0 1237 aa8.19□□□□□ -1.1
NF1-208ENST00000471572 JMYQ8N9B5 988 aa8.19□□□□□ -1.1
NF1-208ENST00000471572 C7orf43Q8WVR3 580 aa8.19□□□□□ -1.1
NF1-208ENST00000471572 WNT2BQ93097 391 aa8.19□□□□□ -1.1
NF1-208ENST00000471572 CDK15Q96Q40 435 aa8.19□□□□□ -1.1
NF1-208ENST00000471572 MTRQ99707 1265 aa8.19□□□□□ -1.1
NF1-208ENST00000471572 GEMIN8Q9NWZ8 242 aaKnown RBP8.19□□□□□ -1.1
NF1-208ENST00000471572 SUPT16HQ9Y5B9 1047 aaKnown RBP8.19□□□□□ -1.1
NF1-208ENST00000471572 APOBRQ0VD83 1088 aa8.18□□□□□ -1.1
NF1-208ENST00000471572 GRIN2CQ14957 1233 aa8.18□□□□□ -1.1
NF1-208ENST00000471572 CEP89Q96ST8 783 aa8.18□□□□□ -1.1
NF1-208ENST00000471572 FAM13BQ9NYF5 915 aa8.18□□□□□ -1.1
NF1-208ENST00000471572 TGFBR3LH3BV60 316 aa8.17□□□□□ -1.1
NF1-208ENST00000471572 DIAPH1O60610 1272 aaKnown RBP8.17□□□□□ -1.1
NF1-208ENST00000471572 PF4P02776 101 aa8.17□□□□□ -1.1
NF1-208ENST00000471572 GNALP38405 381 aa8.17□□□□□ -1.1
NF1-208ENST00000471572 TNNI3KQ59H18 835 aa8.17□□□□□ -1.1
NF1-208ENST00000471572 PDE12Q6L8Q7 609 aaKnown RBP8.17□□□□□ -1.1
NF1-208ENST00000471572 SLC39A13Q96H72 371 aa8.17□□□□□ -1.1
NF1-208ENST00000471572 ELP3Q9H9T3 547 aa8.17□□□□□ -1.1
NF1-208ENST00000471572 KCNMB2Q9Y691 235 aa8.17□□□□□ -1.1
NF1-208ENST00000471572 PTCH2Q9Y6C5 1203 aa8.17□□□□□ -1.1
NF1-208ENST00000471572 GOLGA8CPA6NN73 597 aa8.17□□□□□ -1.1
NF1-208ENST00000471572 UBE4AQ14139 1066 aa8.17□□□□□ -1.1
NF1-208ENST00000471572 C4orf46Q504U0 113 aa8.17□□□□□ -1.1
NF1-208ENST00000471572 WDR75Q8IWA0 830 aaKnown RBP8.17□□□□□ -1.1
NF1-208ENST00000471572 GOLM1Q8NBJ4 401 aa8.17□□□□□ -1.1
NF1-208ENST00000471572 ZNF280CQ8ND82 737 aa8.17□□□□□ -1.1
NF1-208ENST00000471572 CCDC136Q96JN2 1154 aa8.17□□□□□ -1.1
NF1-208ENST00000471572 TLL2Q9Y6L7 1015 aa8.17□□□□□ -1.1
NF1-208ENST00000471572 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.17□□□□□ -1.1
NF1-208ENST00000471572 ASMTLO95671 621 aa8.16□□□□□ -1.1
NF1-208ENST00000471572 TRIM32Q13049 653 aa8.16□□□□□ -1.1
NF1-208ENST00000471572 C21orf62-AS1Q17RA5 79 aa8.16□□□□□ -1.1
NF1-208ENST00000471572 KANK3Q6NY19 840 aa8.16□□□□□ -1.1
NF1-208ENST00000471572 SPATC1Q76KD6 591 aa8.16□□□□□ -1.1
NF1-208ENST00000471572 CCDC116Q8IYX3 515 aa8.16□□□□□ -1.1
NF1-208ENST00000471572 ANKRD24Q8TF21 1146 aa8.16□□□□□ -1.1
NF1-208ENST00000471572 PLD4Q96BZ4 506 aa8.16□□□□□ -1.1
NF1-208ENST00000471572 TNKS2Q9H2K2 1166 aa8.16□□□□□ -1.1
NF1-208ENST00000471572 IDH3AP50213 366 aa8.15□□□□□ -1.1
NF1-208ENST00000471572 CENPCQ03188 943 aa8.15□□□□□ -1.1
NF1-208ENST00000471572 CLN3Q13286 438 aa8.15□□□□□ -1.1
NF1-208ENST00000471572 LRRC41Q15345 812 aa8.15□□□□□ -1.1
NF1-208ENST00000471572 NFE2Q16621 373 aaPredicted RBP8.15□□□□□ -1.1
NF1-208ENST00000471572 SLITRK4Q8IW52 837 aa8.15□□□□□ -1.1
NF1-208ENST00000471572 C1orf127Q8N9H9 656 aa8.15□□□□□ -1.1
NF1-208ENST00000471572 THAP3Q8WTV1 239 aaPredicted RBP8.15□□□□□ -1.1
NF1-208ENST00000471572 LATS2Q9NRM7 1088 aa8.15□□□□□ -1.1
NF1-208ENST00000471572 NR3C2P08235 984 aa8.15□□□□□ -1.11
NF1-208ENST00000471572 GIPRP48546 466 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms