RNA–Protein interactions for RNA: ENST00000471494.5

RNF220-208, Transcript of ring finger protein 220, humanhuman

TSL 5

Gene RNF220, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-208ENST00000471494 CREBZFQ9NS37 354 aa29.8■■■□□ 2.36
RNF220-208ENST00000471494 GGA1Q9UJY5 639 aa29.8■■■□□ 2.36
RNF220-208ENST00000471494 ZC3H12CQ9C0D7 883 aaKnown RBP29.79■■■□□ 2.36
RNF220-208ENST00000471494 ADARB2Q9NS39 739 aaKnown RBP29.79■■■□□ 2.36
RNF220-208ENST00000471494 XDHP47989 1333 aa29.78■■■□□ 2.36
RNF220-208ENST00000471494 E9PSI1 815 aa29.78■■■□□ 2.36
RNF220-208ENST00000471494 ITGBL1O95965 494 aaPredicted RBP29.78■■■□□ 2.36
RNF220-208ENST00000471494 CNTROBQ8N137 903 aa29.78■■■□□ 2.36
RNF220-208ENST00000471494 PLA2G12BQ9BX93 195 aa29.78■■■□□ 2.36
RNF220-208ENST00000471494 CCER2I3L3R5 266 aa29.77■■■□□ 2.36
RNF220-208ENST00000471494 ECE2O60344 883 aa29.77■■■□□ 2.36
RNF220-208ENST00000471494 SCN9AQ15858 1988 aa29.76■■■□□ 2.35
RNF220-208ENST00000471494 CASP7P55210 303 aa29.76■■■□□ 2.35
RNF220-208ENST00000471494 DOK7Q18PE1 504 aa29.76■■■□□ 2.35
RNF220-208ENST00000471494 JMYQ8N9B5 988 aa29.76■■■□□ 2.35
RNF220-208ENST00000471494 G3V3G9 751 aa29.75■■■□□ 2.35
RNF220-208ENST00000471494 BEND3Q5T5X7 828 aa29.75■■■□□ 2.35
RNF220-208ENST00000471494 DCAF8Q5TAQ9 597 aa29.75■■■□□ 2.35
RNF220-208ENST00000471494 PSME4Q14997 1843 aa29.74■■■□□ 2.35
RNF220-208ENST00000471494 BSDC1Q9NW68 430 aaPredicted RBP29.74■■■□□ 2.35
RNF220-208ENST00000471494 PSMD14O00487 310 aa29.73■■■□□ 2.35
RNF220-208ENST00000471494 IGHMBP2P38935 993 aaKnown RBP29.73■■■□□ 2.35
RNF220-208ENST00000471494 FAM161AQ3B820 660 aa29.73■■■□□ 2.35
RNF220-208ENST00000471494 TRPM7Q96QT4 1865 aa29.73■■■□□ 2.35
RNF220-208ENST00000471494 TMEM88BA6NKF7 163 aa29.72■■■□□ 2.35
RNF220-208ENST00000471494 ITGA6P23229 1130 aa29.72■■■□□ 2.35
RNF220-208ENST00000471494 ATP2B4P23634 1241 aa29.72■■■□□ 2.35
RNF220-208ENST00000471494 SLFN5Q08AF3 891 aa29.71■■■□□ 2.35
RNF220-208ENST00000471494 CNOT7Q9UIV1 285 aaKnown RBP29.71■■■□□ 2.35
RNF220-208ENST00000471494 MINPP1Q9UNW1 487 aa29.71■■■□□ 2.35
RNF220-208ENST00000471494 ZBTB12Q9Y330 459 aaPredicted RBP29.71■■■□□ 2.35
RNF220-208ENST00000471494 CSF1RP07333 972 aa29.7■■■□□ 2.35
RNF220-208ENST00000471494 SLC4A10Q6U841 1118 aa29.7■■■□□ 2.35
RNF220-208ENST00000471494 H7C1D1 291 aa29.69■■■□□ 2.34
RNF220-208ENST00000471494 MICALL2Q8IY33 904 aa29.69■■■□□ 2.34
RNF220-208ENST00000471494 DPF2Q92785 391 aa29.69■■■□□ 2.34
RNF220-208ENST00000471494 MKRN1Q9UHC7 482 aaKnown RBP29.69■■■□□ 2.34
RNF220-208ENST00000471494 GRM8O00222 908 aa29.68■■■□□ 2.34
RNF220-208ENST00000471494 RPS12P25398 132 aaKnown RBP29.68■■■□□ 2.34
RNF220-208ENST00000471494 MPHOSPH8Q99549 860 aa29.68■■■□□ 2.34
RNF220-208ENST00000471494 SRCIN1Q9C0H9 1055 aa29.68■■■□□ 2.34
RNF220-208ENST00000471494 KCNQ5Q9NR82 932 aa29.68■■■□□ 2.34
RNF220-208ENST00000471494 ALDH1L1O75891 902 aa29.67■■■□□ 2.34
RNF220-208ENST00000471494 C9orf78Q9NZ63 289 aaPredicted RBP29.67■■■□□ 2.34
RNF220-208ENST00000471494 MED23Q9ULK4 1368 aa29.66■■■□□ 2.34
RNF220-208ENST00000471494 ANKRD18BA2A2Z9 1011 aa29.66■■■□□ 2.34
RNF220-208ENST00000471494 MRPL50Q8N5N7 158 aaKnown RBP29.66■■■□□ 2.34
RNF220-208ENST00000471494 TRPM4Q8TD43 1214 aa29.66■■■□□ 2.34
RNF220-208ENST00000471494 CHMP3Q9Y3E7 222 aa29.66■■■□□ 2.34
RNF220-208ENST00000471494 CNTNAP1P78357 1384 aa29.65■■■□□ 2.34
RNF220-208ENST00000471494 A0A1B0GUL6 1792 aa29.65■■■□□ 2.34
RNF220-208ENST00000471494 SHTN1A0MZ66 631 aa29.65■■■□□ 2.34
RNF220-208ENST00000471494 CCT4P50991 539 aaKnown RBP29.65■■■□□ 2.34
RNF220-208ENST00000471494 FOXO4P98177 505 aa29.65■■■□□ 2.34
RNF220-208ENST00000471494 CDCA7LQ96GN5 454 aa29.65■■■□□ 2.34
RNF220-208ENST00000471494 IFIT5Q13325 482 aaKnown RBP29.64■■■□□ 2.34
RNF220-208ENST00000471494 ZC3H15Q8WU90 426 aaKnown RBP29.64■■■□□ 2.34
RNF220-208ENST00000471494 ANKRD2Q9GZV1 360 aa29.64■■■□□ 2.34
RNF220-208ENST00000471494 VIL1P09327 827 aaKnown RBP29.63■■■□□ 2.33
RNF220-208ENST00000471494 SSH1Q8WYL5 1049 aa29.63■■■□□ 2.33
RNF220-208ENST00000471494 PTPRCP08575 1304 aa29.63■■■□□ 2.33
RNF220-208ENST00000471494 PCNTO95613 3336 aa29.62■■■□□ 2.33
RNF220-208ENST00000471494 TRAF5O00463 557 aa29.62■■■□□ 2.33
RNF220-208ENST00000471494 HIRAP54198 1017 aaPredicted RBP29.62■■■□□ 2.33
RNF220-208ENST00000471494 LEMD3Q9Y2U8 911 aa29.62■■■□□ 2.33
RNF220-208ENST00000471494 WTIPA6NIX2 430 aaPredicted RBP29.61■■■□□ 2.33
RNF220-208ENST00000471494 LMBR1LQ6UX01 489 aa29.61■■■□□ 2.33
RNF220-208ENST00000471494 PODNQ7Z5L7 613 aa29.61■■■□□ 2.33
RNF220-208ENST00000471494 PGAP2Q9UHJ9 254 aa29.61■■■□□ 2.33
RNF220-208ENST00000471494 ABT1Q9ULW3 272 aaKnown RBP29.61■■■□□ 2.33
RNF220-208ENST00000471494 ZNF609O15014 1411 aa29.61■■■□□ 2.33
RNF220-208ENST00000471494 POLR2AP24928 1970 aaKnown RBP29.61■■■□□ 2.33
RNF220-208ENST00000471494 FMR1Q06787 632 aaKnown RBP eCLIP29.6■■■□□ 2.33
RNF220-208ENST00000471494 TBC1D10BQ4KMP7 808 aaPredicted RBP29.6■■■□□ 2.33
RNF220-208ENST00000471494 SAMD7Q7Z3H4 446 aa29.6■■■□□ 2.33
RNF220-208ENST00000471494 KCNJ4P48050 445 aa29.59■■■□□ 2.33
RNF220-208ENST00000471494 EPHA10Q5JZY3 1008 aa29.59■■■□□ 2.33
RNF220-208ENST00000471494 RSBN1LQ6PCB5 846 aaPredicted RBP29.59■■■□□ 2.33
RNF220-208ENST00000471494 ZNF804BA4D1E1 1349 aa29.59■■■□□ 2.33
RNF220-208ENST00000471494 ZNF646O15015 1829 aaPredicted RBP29.58■■■□□ 2.33
RNF220-208ENST00000471494 CHRNDQ07001 517 aa29.58■■■□□ 2.33
RNF220-208ENST00000471494 CCDC57Q2TAC2 916 aa29.58■■■□□ 2.33
RNF220-208ENST00000471494 ALDH1L2Q3SY69 923 aa29.58■■■□□ 2.33
RNF220-208ENST00000471494 TAF7LQ5H9L4 462 aa29.58■■■□□ 2.33
RNF220-208ENST00000471494 GLIS2Q9BZE0 524 aaPredicted RBP29.58■■■□□ 2.33
RNF220-208ENST00000471494 USP17L3A6NCW0 530 aa29.57■■■□□ 2.32
RNF220-208ENST00000471494 USP17L4A6NCW7 530 aa29.57■■■□□ 2.32
RNF220-208ENST00000471494 USP17L1Q7RTZ2 530 aa29.57■■■□□ 2.32
RNF220-208ENST00000471494 TRMT2AQ8IZ69 625 aaKnown RBP29.57■■■□□ 2.32
RNF220-208ENST00000471494 AGBL3Q8NEM8 1001 aa29.57■■■□□ 2.32
RNF220-208ENST00000471494 SMC4Q9NTJ3 1288 aa29.57■■■□□ 2.32
RNF220-208ENST00000471494 RASSF10A6NK89 507 aa29.56■■■□□ 2.32
RNF220-208ENST00000471494 RBM26Q5T8P6 1007 aaKnown RBP29.56■■■□□ 2.32
RNF220-208ENST00000471494 CDC37L1Q7L3B6 337 aa29.56■■■□□ 2.32
RNF220-208ENST00000471494 COA1Q9GZY4 146 aa29.56■■■□□ 2.32
RNF220-208ENST00000471494 EGFRP00533 1210 aa29.55■■■□□ 2.32
RNF220-208ENST00000471494 HSPA1AP0DMV8 641 aaKnown RBP29.55■■■□□ 2.32
RNF220-208ENST00000471494 HSPA1BP0DMV9 641 aaKnown RBP29.55■■■□□ 2.32
RNF220-208ENST00000471494 KIF4BQ2VIQ3 1234 aa29.55■■■□□ 2.32
RNF220-208ENST00000471494 DEFB115Q30KQ5 88 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms