RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 PLD4Q96BZ4 506 aa6.45□□□□□ -1.38
COPS3-206ENST00000471414 NUDT16Q96DE0 195 aaKnown RBP6.45□□□□□ -1.38
COPS3-206ENST00000471414 NSUN5Q96P11 429 aaKnown RBP6.45□□□□□ -1.38
COPS3-206ENST00000471414 FNDC3AQ9Y2H6 1198 aaKnown RBP6.45□□□□□ -1.38
COPS3-206ENST00000471414 C9orf172C9J069 976 aa6.44□□□□□ -1.38
COPS3-206ENST00000471414 K7ELQ4 463 aaPredicted RBP6.44□□□□□ -1.38
COPS3-206ENST00000471414 DEAF1O75398 565 aaPredicted RBP6.44□□□□□ -1.38
COPS3-206ENST00000471414 APBA3O96018 575 aa6.44□□□□□ -1.38
COPS3-206ENST00000471414 MPSTP25325 297 aa6.44□□□□□ -1.38
COPS3-206ENST00000471414 EIF1AXP47813 144 aaKnown RBP6.44□□□□□ -1.38
COPS3-206ENST00000471414 RAC1P63000 192 aa6.44□□□□□ -1.38
COPS3-206ENST00000471414 MBTPS1Q14703 1052 aa6.44□□□□□ -1.38
COPS3-206ENST00000471414 NKAPLQ5M9Q1 402 aa6.44□□□□□ -1.38
COPS3-206ENST00000471414 ABI2Q9NYB9 513 aaPredicted RBP6.44□□□□□ -1.38
COPS3-206ENST00000471414 TMEM63CQ9P1W3 806 aa6.44□□□□□ -1.38
COPS3-206ENST00000471414 TM4SF5O14894 197 aa6.43□□□□□ -1.38
COPS3-206ENST00000471414 PDGFAP04085 211 aa6.43□□□□□ -1.38
COPS3-206ENST00000471414 FURINP09958 794 aa6.43□□□□□ -1.38
COPS3-206ENST00000471414 NOM1Q5C9Z4 860 aaKnown RBP6.43□□□□□ -1.38
COPS3-206ENST00000471414 WFDC8Q8IUA0 241 aa6.43□□□□□ -1.38
COPS3-206ENST00000471414 ELP3Q9H9T3 547 aa6.43□□□□□ -1.38
COPS3-206ENST00000471414 TPSG1Q9NRR2 321 aa6.43□□□□□ -1.38
COPS3-206ENST00000471414 DLL1O00548 723 aa6.42□□□□□ -1.38
COPS3-206ENST00000471414 CYP2E1P05181 493 aaPredicted RBP6.42□□□□□ -1.38
COPS3-206ENST00000471414 RPLP1P05386 114 aaKnown RBP6.42□□□□□ -1.38
COPS3-206ENST00000471414 MZF1P28698 734 aaPredicted RBP6.42□□□□□ -1.38
COPS3-206ENST00000471414 MTMR3Q13615 1198 aa6.42□□□□□ -1.38
COPS3-206ENST00000471414 RSPO4Q2I0M5 234 aaPredicted RBP6.42□□□□□ -1.38
COPS3-206ENST00000471414 SHISA2Q6UWI4 295 aa6.42□□□□□ -1.38
COPS3-206ENST00000471414 ADAMTSL4Q6UY14 1074 aa6.42□□□□□ -1.38
COPS3-206ENST00000471414 EDEM1Q92611 657 aa6.42□□□□□ -1.38
COPS3-206ENST00000471414 SSBP4Q9BWG4 385 aaPredicted RBP6.42□□□□□ -1.38
COPS3-206ENST00000471414 GGNBP2Q9H3C7 697 aa6.42□□□□□ -1.38
COPS3-206ENST00000471414 GHRHP01286 108 aa6.41□□□□□ -1.38
COPS3-206ENST00000471414 NRG1Q02297 640 aaPredicted RBP6.41□□□□□ -1.38
COPS3-206ENST00000471414 HYAL2Q12891 473 aa6.41□□□□□ -1.38
COPS3-206ENST00000471414 SF3B2Q13435 895 aaKnown RBP6.41□□□□□ -1.38
COPS3-206ENST00000471414 DOC2BQ14184 412 aa6.41□□□□□ -1.38
COPS3-206ENST00000471414 ECM1Q16610 540 aa6.41□□□□□ -1.38
COPS3-206ENST00000471414 CACTIN-AS1Q8N1I8 211 aa6.41□□□□□ -1.38
COPS3-206ENST00000471414 CEP120Q8N960 986 aa6.41□□□□□ -1.38
COPS3-206ENST00000471414 CHRDQ9H2X0 955 aa6.41□□□□□ -1.38
COPS3-206ENST00000471414 SRA1Q9HD15 236 aaKnown RBP6.41□□□□□ -1.38
COPS3-206ENST00000471414 CNTN3Q9P232 1028 aa6.41□□□□□ -1.38
COPS3-206ENST00000471414 TRIM33Q9UPN9 1127 aa6.41□□□□□ -1.38
COPS3-206ENST00000471414 FZD6O60353 706 aa6.4□□□□□ -1.38
COPS3-206ENST00000471414 ATP11AP98196 1134 aa6.4□□□□□ -1.38
COPS3-206ENST00000471414 TTC39BQ5VTQ0 682 aaPredicted RBP6.4□□□□□ -1.38
COPS3-206ENST00000471414 TXNRD3Q86VQ6 643 aa6.4□□□□□ -1.38
COPS3-206ENST00000471414 EGFL7Q9UHF1 273 aa6.4□□□□□ -1.38
COPS3-206ENST00000471414 SALL4Q9UJQ4 1053 aa6.4□□□□□ -1.38
COPS3-206ENST00000471414 TIMELESSQ9UNS1 1208 aa6.4□□□□□ -1.38
COPS3-206ENST00000471414 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.4□□□□□ -1.38
COPS3-206ENST00000471414 FAM13AO94988 1023 aa6.39□□□□□ -1.39
COPS3-206ENST00000471414 DNM1Q05193 864 aaKnown RBP6.39□□□□□ -1.39
COPS3-206ENST00000471414 SETDB1Q15047 1291 aa6.39□□□□□ -1.39
COPS3-206ENST00000471414 ALKBH2Q6NS38 261 aa6.39□□□□□ -1.39
COPS3-206ENST00000471414 IGF2-ASQ6U949 168 aa6.39□□□□□ -1.39
COPS3-206ENST00000471414 ZNF438Q7Z4V0 828 aa6.39□□□□□ -1.39
COPS3-206ENST00000471414 GJD3Q8N144 294 aa6.39□□□□□ -1.39
COPS3-206ENST00000471414 IL22RA1Q8N6P7 574 aa6.39□□□□□ -1.39
COPS3-206ENST00000471414 RBSNQ9H1K0 784 aa6.39□□□□□ -1.39
COPS3-206ENST00000471414 NFKBIEO00221 500 aa6.38□□□□□ -1.39
COPS3-206ENST00000471414 FKBP4Q02790 459 aaKnown RBP eCLIP6.38□□□□□ -1.39
COPS3-206ENST00000471414 GDF6Q6KF10 455 aaPredicted RBP6.38□□□□□ -1.39
COPS3-206ENST00000471414 MAP4K3Q8IVH8 894 aa6.38□□□□□ -1.39
COPS3-206ENST00000471414 C1orf127Q8N9H9 656 aa6.38□□□□□ -1.39
COPS3-206ENST00000471414 PBX4Q9BYU1 374 aa6.38□□□□□ -1.39
COPS3-206ENST00000471414 RASSF4Q9H2L5 321 aa6.38□□□□□ -1.39
COPS3-206ENST00000471414 POLIQ9UNA4 740 aa6.38□□□□□ -1.39
COPS3-206ENST00000471414 MTMR7Q9Y216 660 aa6.38□□□□□ -1.39
COPS3-206ENST00000471414 A6NHS1 94 aa6.37□□□□□ -1.39
COPS3-206ENST00000471414 Q6ZS46 218 aa6.37□□□□□ -1.39
COPS3-206ENST00000471414 ADAM19Q9H013 955 aa6.37□□□□□ -1.39
COPS3-206ENST00000471414 MUC3BQ9H195 1237 aa6.37□□□□□ -1.39
COPS3-206ENST00000471414 DYRK3O43781 588 aa6.36□□□□□ -1.39
COPS3-206ENST00000471414 ICMTO60725 284 aa6.36□□□□□ -1.39
COPS3-206ENST00000471414 H2AFB1P0C5Y9 115 aa6.36□□□□□ -1.39
COPS3-206ENST00000471414 H2AFB2P0C5Z0 115 aa6.36□□□□□ -1.39
COPS3-206ENST00000471414 PCSK2P16519 638 aa6.36□□□□□ -1.39
COPS3-206ENST00000471414 NOS3P29474 1203 aa6.36□□□□□ -1.39
COPS3-206ENST00000471414 ZNF211Q13398 564 aaPredicted RBP6.36□□□□□ -1.39
COPS3-206ENST00000471414 B4GALNT3Q6L9W6 998 aa6.36□□□□□ -1.39
COPS3-206ENST00000471414 TXNDC2Q86VQ3 553 aa6.36□□□□□ -1.39
COPS3-206ENST00000471414 TMEM130Q8N3G9 435 aa6.36□□□□□ -1.39
COPS3-206ENST00000471414 RETREG2Q8NC44 543 aa6.36□□□□□ -1.39
COPS3-206ENST00000471414 WFDC12Q8WWY7 111 aa6.36□□□□□ -1.39
COPS3-206ENST00000471414 POP1Q99575 1024 aaKnown RBP6.36□□□□□ -1.39
COPS3-206ENST00000471414 KANSL3Q9P2N6 904 aa6.36□□□□□ -1.39
COPS3-206ENST00000471414 SUPT5HO00267 1087 aaKnown RBP6.35□□□□□ -1.39
COPS3-206ENST00000471414 TNFRSF21O75509 655 aa6.35□□□□□ -1.39
COPS3-206ENST00000471414 SMNDC1O75940 238 aaKnown RBP eCLIP6.35□□□□□ -1.39
COPS3-206ENST00000471414 USP5P45974 858 aa6.35□□□□□ -1.39
COPS3-206ENST00000471414 CEP135Q66GS9 1140 aa6.35□□□□□ -1.39
COPS3-206ENST00000471414 GALNT11Q8NCW6 608 aa6.35□□□□□ -1.39
COPS3-206ENST00000471414 SPACA7Q96KW9 195 aa6.35□□□□□ -1.39
COPS3-206ENST00000471414 SEMA6BQ9H3T3 888 aa6.35□□□□□ -1.39
COPS3-206ENST00000471414 CCDC87Q9NVE4 849 aa6.35□□□□□ -1.39
COPS3-206ENST00000471414 DZANK1Q9NVP4 752 aa6.35□□□□□ -1.39
COPS3-206ENST00000471414 PPME1Q9Y570 386 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms