RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, human

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1-208	ENST00000471250	XAGE2	Q96GT9	111 aa		31.51	■■■□□ 2.63
U2AF1-208	ENST00000471250	KIF2C	Q99661	725 aa		31.51	■■■□□ 2.63
U2AF1-208	ENST00000471250	HIP1	O00291	1037 aa		31.5	■■■□□ 2.63
U2AF1-208	ENST00000471250	SGSM2	O43147	1006 aa		31.5	■■■□□ 2.63
U2AF1-208	ENST00000471250	CDC5L	Q99459	802 aa	Known RBP	31.5	■■■□□ 2.63
U2AF1-208	ENST00000471250	DIAPH3	Q9NSV4	1193 aa		31.5	■■■□□ 2.63
U2AF1-208	ENST00000471250	SPEF2	Q9C093	1822 aa		31.49	■■■□□ 2.63
U2AF1-208	ENST00000471250	RUFY2	Q8WXA3	655 aa		31.49	■■■□□ 2.63
U2AF1-208	ENST00000471250	AKT1S1	Q96B36	256 aa		31.49	■■■□□ 2.63
U2AF1-208	ENST00000471250	EPB41L2	O43491	1005 aa	Known RBP	31.48	■■■□□ 2.63
U2AF1-208	ENST00000471250	ADORA1	P30542	326 aa		31.48	■■■□□ 2.63
U2AF1-208	ENST00000471250	NLRP3	Q96P20	1036 aa		31.48	■■■□□ 2.63
U2AF1-208	ENST00000471250	IL25	Q9H293	177 aa		31.48	■■■□□ 2.63
U2AF1-208	ENST00000471250	BECN1	Q14457	450 aa		31.48	■■■□□ 2.63
U2AF1-208	ENST00000471250	CCDC158	Q5M9N0	1113 aa		31.48	■■■□□ 2.63
U2AF1-208	ENST00000471250	FSD1	Q9BTV5	496 aa		31.48	■■■□□ 2.63
U2AF1-208	ENST00000471250	EP400	Q96L91	3159 aa		31.47	■■■□□ 2.63
U2AF1-208	ENST00000471250	ZNF827	Q17R98	1081 aa		31.46	■■■□□ 2.63
U2AF1-208	ENST00000471250	CWC27	Q6UX04	472 aa	Known RBP	31.46	■■■□□ 2.63
U2AF1-208	ENST00000471250	DAXX	Q9UER7	740 aa	Predicted RBP	31.46	■■■□□ 2.63
U2AF1-208	ENST00000471250	RFX7	Q2KHR2	1363 aa		31.46	■■■□□ 2.63
U2AF1-208	ENST00000471250	FGFR2	P21802	821 aa		31.45	■■■□□ 2.63
U2AF1-208	ENST00000471250	GORAB	Q5T7V8	394 aa		31.45	■■■□□ 2.63
U2AF1-208	ENST00000471250	EDC3	Q96F86	508 aa	Known RBP	31.45	■■■□□ 2.63
U2AF1-208	ENST00000471250	DNAJC2	Q99543	621 aa	Known RBP	31.45	■■■□□ 2.63
U2AF1-208	ENST00000471250	ANO2	Q9NQ90	1003 aa		31.45	■■■□□ 2.63
U2AF1-208	ENST00000471250	COL4A1	P02462	1669 aa		31.44	■■■□□ 2.62
U2AF1-208	ENST00000471250	IFIT1	P09914	478 aa	Known RBP	31.44	■■■□□ 2.62
U2AF1-208	ENST00000471250	TM4SF1	P30408	202 aa		31.44	■■■□□ 2.62
U2AF1-208	ENST00000471250	PUM3	Q15397	648 aa	Known RBP	31.44	■■■□□ 2.62
U2AF1-208	ENST00000471250	ANKRD18A	Q8IVF6	992 aa		31.44	■■■□□ 2.62
U2AF1-208	ENST00000471250	ARAP2	Q8WZ64	1704 aa		31.44	■■■□□ 2.62
U2AF1-208	ENST00000471250	TTC39A	Q5SRH9	613 aa		31.44	■■■□□ 2.62
U2AF1-208	ENST00000471250	TFCP2L1	Q9NZI6	479 aa		31.44	■■■□□ 2.62
U2AF1-208	ENST00000471250	SLC4A3	P48751	1232 aa		31.42	■■■□□ 2.62
U2AF1-208	ENST00000471250	LPIN2	Q92539	896 aa		31.42	■■■□□ 2.62
U2AF1-208	ENST00000471250	NDUFB9	Q9Y6M9	179 aa		31.42	■■■□□ 2.62
U2AF1-208	ENST00000471250	TICAM2	Q86XR7	235 aa		31.41	■■■□□ 2.62
U2AF1-208	ENST00000471250	CNBD1	Q8NA66	436 aa		31.41	■■■□□ 2.62
U2AF1-208	ENST00000471250	HELB	Q8NG08	1087 aa	Predicted RBP	31.41	■■■□□ 2.62
U2AF1-208	ENST00000471250	PAG1	Q9NWQ8	432 aa		31.41	■■■□□ 2.62
U2AF1-208	ENST00000471250	RAD50	Q92878	1312 aa		31.41	■■■□□ 2.62
U2AF1-208	ENST00000471250	CCDC24	Q8N4L8	307 aa		31.41	■■■□□ 2.62
U2AF1-208	ENST00000471250	BSDC1	Q9NW68	430 aa	Predicted RBP	31.41	■■■□□ 2.62
U2AF1-208	ENST00000471250	TNRC6C	Q9HCJ0	1690 aa	Known RBP	31.4	■■■□□ 2.62
U2AF1-208	ENST00000471250	NPHP1	O15259	732 aa		31.4	■■■□□ 2.62
U2AF1-208	ENST00000471250	NMI	Q13287	307 aa	Predicted RBP	31.4	■■■□□ 2.62
U2AF1-208	ENST00000471250	KBTBD3	Q8NAB2	608 aa		31.4	■■■□□ 2.62
U2AF1-208	ENST00000471250	ZNF512B	Q96KM6	892 aa	Predicted RBP	31.4	■■■□□ 2.62
U2AF1-208	ENST00000471250	TBC1D2	Q9BYX2	928 aa		31.4	■■■□□ 2.62
U2AF1-208	ENST00000471250	SNRK	Q9NRH2	765 aa		31.4	■■■□□ 2.62
U2AF1-208	ENST00000471250	TAF1	P21675	1872 aa		31.4	■■■□□ 2.62
U2AF1-208	ENST00000471250	MCC	P23508	829 aa		31.39	■■■□□ 2.62
U2AF1-208	ENST00000471250	FLAD1	Q8NFF5	587 aa		31.39	■■■□□ 2.62
U2AF1-208	ENST00000471250	LSG1	Q9H089	658 aa	Known RBP	31.39	■■■□□ 2.62
U2AF1-208	ENST00000471250	SLC5A1	P13866	664 aa		31.38	■■■□□ 2.61
U2AF1-208	ENST00000471250	CHRND	Q07001	517 aa		31.38	■■■□□ 2.61
U2AF1-208	ENST00000471250	DDX46	Q7L014	1031 aa	Known RBP	31.38	■■■□□ 2.61
U2AF1-208	ENST00000471250	SNX21	Q969T3	373 aa		31.38	■■■□□ 2.61
U2AF1-208	ENST00000471250	FAM227B	Q96M60	508 aa		31.38	■■■□□ 2.61
U2AF1-208	ENST00000471250		A0A1B0GUL6	1792 aa		31.38	■■■□□ 2.61
U2AF1-208	ENST00000471250	GOLIM4	O00461	696 aa		31.38	■■■□□ 2.61
U2AF1-208	ENST00000471250	SERPINB2	P05120	415 aa		31.38	■■■□□ 2.61
U2AF1-208	ENST00000471250	PRR5L	Q6MZQ0	368 aa		31.38	■■■□□ 2.61
U2AF1-208	ENST00000471250	KIAA1211	Q6ZU35	1233 aa		31.38	■■■□□ 2.61
U2AF1-208	ENST00000471250	TAF5L	O75529	589 aa		31.37	■■■□□ 2.61
U2AF1-208	ENST00000471250	RABEP1	Q15276	862 aa		31.37	■■■□□ 2.61
U2AF1-208	ENST00000471250	COL23A1	Q86Y22	540 aa	Predicted RBP	31.37	■■■□□ 2.61
U2AF1-208	ENST00000471250	CELF1	Q92879	486 aa	Known RBP	31.37	■■■□□ 2.61
U2AF1-208	ENST00000471250	RPS8	P62241	208 aa	Known RBP	31.35	■■■□□ 2.61
U2AF1-208	ENST00000471250		A0A0D9SFI3	127 aa		31.35	■■■□□ 2.61
U2AF1-208	ENST00000471250	ANAPC15	P60006	121 aa		31.34	■■■□□ 2.61
U2AF1-208	ENST00000471250	SCARF1	Q14162	830 aa		31.34	■■■□□ 2.61
U2AF1-208	ENST00000471250	CCDC102B	Q68D86	513 aa		31.34	■■■□□ 2.61
U2AF1-208	ENST00000471250	IL17RA	Q96F46	866 aa		31.34	■■■□□ 2.61
U2AF1-208	ENST00000471250	AKAP11	Q9UKA4	1901 aa		31.33	■■■□□ 2.61
U2AF1-208	ENST00000471250	MED23	Q9ULK4	1368 aa		31.33	■■■□□ 2.61
U2AF1-208	ENST00000471250	POLRMT	O00411	1230 aa	Known RBP	31.33	■■■□□ 2.61
U2AF1-208	ENST00000471250	UQCRFS1P1	P0C7P4	283 aa		31.33	■■■□□ 2.61
U2AF1-208	ENST00000471250	ARID4A	P29374	1257 aa	Predicted RBP	31.33	■■■□□ 2.61
U2AF1-208	ENST00000471250	HSPA4	P34932	840 aa		31.33	■■■□□ 2.61
U2AF1-208	ENST00000471250	ST5	P78524	1137 aa		31.33	■■■□□ 2.61
U2AF1-208	ENST00000471250	DDR1	Q08345	913 aa		31.33	■■■□□ 2.61
U2AF1-208	ENST00000471250	ERICH6	Q7L0X2	663 aa		31.33	■■■□□ 2.61
U2AF1-208	ENST00000471250	CAMKK2	Q96RR4	588 aa		31.33	■■■□□ 2.61
U2AF1-208	ENST00000471250	MINPP1	Q9UNW1	487 aa		31.33	■■■□□ 2.61
U2AF1-208	ENST00000471250	FKBP4	Q02790	459 aa	Known RBP eCLIP	31.32	■■■□□ 2.6
U2AF1-208	ENST00000471250	HSCB	Q8IWL3	235 aa		31.32	■■■□□ 2.6
U2AF1-208	ENST00000471250	NLGN1	Q8N2Q7	840 aa		31.32	■■■□□ 2.6
U2AF1-208	ENST00000471250	ANTXR1	Q9H6X2	564 aa		31.32	■■■□□ 2.6
U2AF1-208	ENST00000471250	MCAM	P43121	646 aa		31.31	■■■□□ 2.6
U2AF1-208	ENST00000471250	ZAP70	P43403	619 aa		31.31	■■■□□ 2.6
U2AF1-208	ENST00000471250	PHKA1	P46020	1223 aa		31.31	■■■□□ 2.6
U2AF1-208	ENST00000471250	SNAP23	O00161	211 aa		31.3	■■■□□ 2.6
U2AF1-208	ENST00000471250	PTH1R	Q03431	593 aa		31.29	■■■□□ 2.6
U2AF1-208	ENST00000471250	UBE4A	Q14139	1066 aa		31.29	■■■□□ 2.6
U2AF1-208	ENST00000471250	EZH2	Q15910	746 aa	Known RBP	31.29	■■■□□ 2.6
U2AF1-208	ENST00000471250	PALD1	Q9ULE6	856 aa		31.29	■■■□□ 2.6
U2AF1-208	ENST00000471250	CCDC171	Q6TFL3	1326 aa		31.29	■■■□□ 2.6
U2AF1-208	ENST00000471250	PNPLA7	Q6ZV29	1317 aa		31.29	■■■□□ 2.6

Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms