RNA–Protein interactions for RNA: ENST00000470994.1

GPNMB-208, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 538 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-208ENST00000470994 THEMISQ8N1K5 641 aaPredicted RBP9.05□□□□□ -0.96
GPNMB-208ENST00000470994 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.05□□□□□ -0.96
GPNMB-208ENST00000470994 NFATC2IPQ8NCF5 419 aa9.05□□□□□ -0.96
GPNMB-208ENST00000470994 CEP63Q96MT8 703 aa9.05□□□□□ -0.96
GPNMB-208ENST00000470994 BRD7Q9NPI1 651 aa9.05□□□□□ -0.96
GPNMB-208ENST00000470994 ADGRE1Q14246 886 aa9.04□□□□□ -0.96
GPNMB-208ENST00000470994 C8orf86Q6ZUL3 223 aa9.04□□□□□ -0.96
GPNMB-208ENST00000470994 TXNRD3Q86VQ6 643 aa9.04□□□□□ -0.96
GPNMB-208ENST00000470994 CAMSAP1Q5T5Y3 1602 aa9.04□□□□□ -0.96
GPNMB-208ENST00000470994 RTEL1-TNFRSF6BF6WH68 1400 aa9.04□□□□□ -0.96
GPNMB-208ENST00000470994 NCOA2Q15596 1464 aa9.03□□□□□ -0.96
GPNMB-208ENST00000470994 EPHA4P54764 986 aa9.03□□□□□ -0.96
GPNMB-208ENST00000470994 KCNQ4P56696 695 aa9.03□□□□□ -0.96
GPNMB-208ENST00000470994 PSMA6P60900 246 aaKnown RBP9.03□□□□□ -0.96
GPNMB-208ENST00000470994 MBTPS1Q14703 1052 aa9.03□□□□□ -0.96
GPNMB-208ENST00000470994 C1orf53Q5VUE5 145 aa9.03□□□□□ -0.96
GPNMB-208ENST00000470994 TRIM50Q86XT4 487 aa9.03□□□□□ -0.96
GPNMB-208ENST00000470994 KCNH4Q9UQ05 1017 aa9.03□□□□□ -0.96
GPNMB-208ENST00000470994 C3P01024 1663 aa9.03□□□□□ -0.96
GPNMB-208ENST00000470994 CDC42BPAQ5VT25 1732 aa9.02□□□□□ -0.96
GPNMB-208ENST00000470994 EHBP1L1Q8N3D4 1523 aa9.02□□□□□ -0.97
GPNMB-208ENST00000470994 PIK3CDO00329 1044 aa9.02□□□□□ -0.97
GPNMB-208ENST00000470994 TOM1O60784 492 aa9.02□□□□□ -0.97
GPNMB-208ENST00000470994 C20orf204Q6ZNR8 217 aa9.02□□□□□ -0.97
GPNMB-208ENST00000470994 RAB44Q7Z6P3 723 aaPredicted RBP9.02□□□□□ -0.97
GPNMB-208ENST00000470994 KRTAP1-3Q8IUG1 177 aa9.02□□□□□ -0.97
GPNMB-208ENST00000470994 WWC1Q8IX03 1113 aa9.02□□□□□ -0.97
GPNMB-208ENST00000470994 LENG1Q96BZ8 264 aaPredicted RBP9.02□□□□□ -0.97
GPNMB-208ENST00000470994 SUPT6HQ7KZ85 1726 aaKnown RBP9.02□□□□□ -0.97
GPNMB-208ENST00000470994 STRCQ7RTU9 1775 aa9.01□□□□□ -0.97
GPNMB-208ENST00000470994 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.01□□□□□ -0.97
GPNMB-208ENST00000470994 NCOA4Q13772 614 aa9.01□□□□□ -0.97
GPNMB-208ENST00000470994 EFCC1Q9HA90 598 aa9.01□□□□□ -0.97
GPNMB-208ENST00000470994 RRP7BPQ9NSQ0 103 aa9.01□□□□□ -0.97
GPNMB-208ENST00000470994 CCDC141Q6ZP82 1450 aa9.01□□□□□ -0.97
GPNMB-208ENST00000470994 MIA2Q96PC5 1412 aa9□□□□□ -0.97
GPNMB-208ENST00000470994 A0A0A0MRY4 1105 aa9□□□□□ -0.97
GPNMB-208ENST00000470994 HIRAP54198 1017 aaPredicted RBP9□□□□□ -0.97
GPNMB-208ENST00000470994 TBC1D8BQ0IIM8 1120 aa9□□□□□ -0.97
GPNMB-208ENST00000470994 HIF1AQ16665 826 aa9□□□□□ -0.97
GPNMB-208ENST00000470994 TBCELQ5QJ74 424 aa9□□□□□ -0.97
GPNMB-208ENST00000470994 TNS4Q8IZW8 715 aa9□□□□□ -0.97
GPNMB-208ENST00000470994 C7orf43Q8WVR3 580 aa9□□□□□ -0.97
GPNMB-208ENST00000470994 BHMTQ93088 406 aa9□□□□□ -0.97
GPNMB-208ENST00000470994 UBE2OQ9C0C9 1292 aaKnown RBP9□□□□□ -0.97
GPNMB-208ENST00000470994 JPH1Q9HDC5 661 aaPredicted RBP9□□□□□ -0.97
GPNMB-208ENST00000470994 LTBP4Q8N2S1 1624 aa9□□□□□ -0.97
GPNMB-208ENST00000470994 TIAM1Q13009 1591 aa8.99□□□□□ -0.97
GPNMB-208ENST00000470994 SELPP16109 830 aa8.99□□□□□ -0.97
GPNMB-208ENST00000470994 HSPA1LP34931 641 aa8.99□□□□□ -0.97
GPNMB-208ENST00000470994 TYRO3Q06418 890 aa8.99□□□□□ -0.97
GPNMB-208ENST00000470994 USP21Q9UK80 565 aa8.99□□□□□ -0.97
GPNMB-208ENST00000470994 A2ML1A8K2U0 1454 aa8.99□□□□□ -0.97
GPNMB-208ENST00000470994 CAMSAP2Q08AD1 1489 aa8.99□□□□□ -0.97
GPNMB-208ENST00000470994 PLA2R1Q13018 1463 aa8.99□□□□□ -0.97
GPNMB-208ENST00000470994 SFI1A8K8P3 1242 aa8.98□□□□□ -0.97
GPNMB-208ENST00000470994 USP17L5A8MUK1 530 aa8.98□□□□□ -0.97
GPNMB-208ENST00000470994 ATP1A2P50993 1020 aa8.98□□□□□ -0.97
GPNMB-208ENST00000470994 LCE3BQ5TA77 95 aa8.98□□□□□ -0.97
GPNMB-208ENST00000470994 TP53INP1Q96A56 240 aa8.98□□□□□ -0.97
GPNMB-208ENST00000470994 INO80Q9ULG1 1556 aaPredicted RBP8.98□□□□□ -0.97
GPNMB-208ENST00000470994 CLTCQ00610 1675 aaKnown RBP8.97□□□□□ -0.97
GPNMB-208ENST00000470994 VPS8Q8N3P4 1428 aa8.97□□□□□ -0.97
GPNMB-208ENST00000470994 TCOF1Q13428 1488 aaKnown RBP8.97□□□□□ -0.97
GPNMB-208ENST00000470994 TXNDC2Q86VQ3 553 aa8.97□□□□□ -0.97
GPNMB-208ENST00000470994 HSH2DQ96JZ2 352 aa8.97□□□□□ -0.97
GPNMB-208ENST00000470994 PHACTR1Q9C0D0 580 aa8.97□□□□□ -0.97
GPNMB-208ENST00000470994 SLC6A14Q9UN76 642 aa8.97□□□□□ -0.97
GPNMB-208ENST00000470994 PLXNC1O60486 1568 aa8.97□□□□□ -0.97
GPNMB-208ENST00000470994 CEP170BQ9Y4F5 1589 aaPredicted RBP8.97□□□□□ -0.97
GPNMB-208ENST00000470994 LRRC9Q6ZRR7 1453 aa8.96□□□□□ -0.97
GPNMB-208ENST00000470994 SH3PXD2AQ5TCZ1 1133 aa8.96□□□□□ -0.98
GPNMB-208ENST00000470994 TPCN2Q8NHX9 752 aa8.96□□□□□ -0.98
GPNMB-208ENST00000470994 SUSD3Q96L08 255 aa8.96□□□□□ -0.98
GPNMB-208ENST00000470994 IGFLR1Q9H665 355 aa8.96□□□□□ -0.98
GPNMB-208ENST00000470994 PZPP20742 1482 aa8.96□□□□□ -0.98
GPNMB-208ENST00000470994 IQSEC2Q5JU85 1478 aa8.96□□□□□ -0.98
GPNMB-208ENST00000470994 HYAL3O43820 417 aaPredicted RBP8.95□□□□□ -0.98
GPNMB-208ENST00000470994 PNMA5Q96PV4 448 aa8.95□□□□□ -0.98
GPNMB-208ENST00000470994 HCN4Q9Y3Q4 1203 aa8.95□□□□□ -0.98
GPNMB-208ENST00000470994 EID1Q9Y6B2 187 aa8.95□□□□□ -0.98
GPNMB-208ENST00000470994 NPHP4O75161 1426 aaPredicted RBP8.95□□□□□ -0.98
GPNMB-208ENST00000470994 FAM135AQ9P2D6 1515 aa8.95□□□□□ -0.98
GPNMB-208ENST00000470994 FAM50AQ14320 339 aaKnown RBP8.94□□□□□ -0.98
GPNMB-208ENST00000470994 FMR1NBQ8N0W7 255 aaPredicted RBP8.94□□□□□ -0.98
GPNMB-208ENST00000470994 NUDT8Q8WV74 236 aa8.94□□□□□ -0.98
GPNMB-208ENST00000470994 KRTAP4-12Q9BQ66 201 aa8.94□□□□□ -0.98
GPNMB-208ENST00000470994 TSPAN10Q9H1Z9 355 aaPredicted RBP8.94□□□□□ -0.98
GPNMB-208ENST00000470994 ALG2Q9H553 416 aa8.94□□□□□ -0.98
GPNMB-208ENST00000470994 RBM19Q9Y4C8 960 aaKnown RBP8.94□□□□□ -0.98
GPNMB-208ENST00000470994 MYOM3Q5VTT5 1437 aa8.94□□□□□ -0.98
GPNMB-208ENST00000470994 SHANK2Q9UPX8 1470 aa8.94□□□□□ -0.98
GPNMB-208ENST00000470994 MROH2AA6NES4 1674 aa8.94□□□□□ -0.98
GPNMB-208ENST00000470994 M0R2N6 131 aa8.93□□□□□ -0.98
GPNMB-208ENST00000470994 LTKP29376 864 aa8.93□□□□□ -0.98
GPNMB-208ENST00000470994 MCM6Q14566 821 aa8.93□□□□□ -0.98
GPNMB-208ENST00000470994 PCSK7Q16549 785 aa8.93□□□□□ -0.98
GPNMB-208ENST00000470994 CCDC102BQ68D86 513 aa8.93□□□□□ -0.98
GPNMB-208ENST00000470994 PSAPL1Q6NUJ1 521 aa8.93□□□□□ -0.98
GPNMB-208ENST00000470994 POTEAQ6S8J7 498 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms