RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-233	ENST00000470710	RPS8	P62241	208 aa	Known RBP	10.68	□□□□□ -0.7
HDLBP-233	ENST00000470710	METTL24	Q5JXM2	366 aa		10.68	□□□□□ -0.7
HDLBP-233	ENST00000470710	VGLL2	Q8N8G2	317 aa		10.68	□□□□□ -0.7
HDLBP-233	ENST00000470710	ZNF609	O15014	1411 aa		10.67	□□□□□ -0.7
HDLBP-233	ENST00000470710	ERC2	O15083	957 aa		10.67	□□□□□ -0.7
HDLBP-233	ENST00000470710	GLRX3	O76003	335 aa	Known RBP	10.67	□□□□□ -0.7
HDLBP-233	ENST00000470710	GSPT1	P15170	499 aa	Known RBP	10.67	□□□□□ -0.7
HDLBP-233	ENST00000470710	GRAP	Q13588	217 aa		10.67	□□□□□ -0.7
HDLBP-233	ENST00000470710	GRAPL	Q8TC17	118 aa	Predicted RBP	10.67	□□□□□ -0.7
HDLBP-233	ENST00000470710	RPGR	Q92834	1020 aa	Known RBP	10.67	□□□□□ -0.7
HDLBP-233	ENST00000470710	CELF1	Q92879	486 aa	Known RBP	10.67	□□□□□ -0.7
HDLBP-233	ENST00000470710	RBM17	Q96I25	401 aa	Known RBP	10.67	□□□□□ -0.7
HDLBP-233	ENST00000470710	ECHDC1	Q9NTX5	307 aa		10.67	□□□□□ -0.7
HDLBP-233	ENST00000470710	DBNL	Q9UJU6	430 aa	Known RBP	10.67	□□□□□ -0.7
HDLBP-233	ENST00000470710	PDE8B	O95263	885 aa		10.66	□□□□□ -0.7
HDLBP-233	ENST00000470710	FGFR2	P21802	821 aa		10.66	□□□□□ -0.7
HDLBP-233	ENST00000470710	PDE6B	P35913	854 aa		10.66	□□□□□ -0.7
HDLBP-233	ENST00000470710	PUM3	Q15397	648 aa	Known RBP	10.66	□□□□□ -0.7
HDLBP-233	ENST00000470710	PI4K2B	Q8TCG2	481 aa		10.66	□□□□□ -0.7
HDLBP-233	ENST00000470710	CRAMP1	Q96RY5	1269 aa		10.66	□□□□□ -0.7
HDLBP-233	ENST00000470710	PDGFD	Q9GZP0	370 aa	Predicted RBP	10.66	□□□□□ -0.7
HDLBP-233	ENST00000470710	CCDC8	Q9H0W5	538 aa	Predicted RBP	10.66	□□□□□ -0.7
HDLBP-233	ENST00000470710	BCL11A	Q9H165	835 aa		10.66	□□□□□ -0.7
HDLBP-233	ENST00000470710	TLR7	Q9NYK1	1049 aa	Known RBP	10.66	□□□□□ -0.7
HDLBP-233	ENST00000470710	TNRC6C	Q9HCJ0	1690 aa	Known RBP	10.66	□□□□□ -0.7
HDLBP-233	ENST00000470710		A0A1B0GUL7	405 aa		10.65	□□□□□ -0.7
HDLBP-233	ENST00000470710	BBOX1	O75936	387 aa		10.65	□□□□□ -0.7
HDLBP-233	ENST00000470710	NPR1	P16066	1061 aa		10.65	□□□□□ -0.7
HDLBP-233	ENST00000470710	CHRND	Q07001	517 aa		10.65	□□□□□ -0.7
HDLBP-233	ENST00000470710	ATP2B3	Q16720	1220 aa		10.65	□□□□□ -0.7
HDLBP-233	ENST00000470710	C8orf34	Q49A92	452 aa		10.65	□□□□□ -0.7
HDLBP-233	ENST00000470710	TSHZ3	Q63HK5	1081 aa		10.65	□□□□□ -0.7
HDLBP-233	ENST00000470710	TMC4	Q7Z404	712 aa		10.65	□□□□□ -0.7
HDLBP-233	ENST00000470710	LPIN2	Q92539	896 aa		10.65	□□□□□ -0.7
HDLBP-233	ENST00000470710	DBNDD2	Q9BQY9	259 aa		10.65	□□□□□ -0.7
HDLBP-233	ENST00000470710	BACH2	Q9BYV9	841 aa		10.65	□□□□□ -0.7
HDLBP-233	ENST00000470710	SRGN	P10124	158 aa		10.64	□□□□□ -0.71
HDLBP-233	ENST00000470710	ATP5J	P18859	108 aa		10.64	□□□□□ -0.71
HDLBP-233	ENST00000470710	TIMM10	P62072	90 aa		10.64	□□□□□ -0.71
HDLBP-233	ENST00000470710	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	10.64	□□□□□ -0.71
HDLBP-233	ENST00000470710	NEUROD6	Q96NK8	337 aa		10.64	□□□□□ -0.71
HDLBP-233	ENST00000470710	ANKRD2	Q9GZV1	360 aa		10.64	□□□□□ -0.71
HDLBP-233	ENST00000470710	MTFR1L	Q9H019	292 aa		10.64	□□□□□ -0.71
HDLBP-233	ENST00000470710	MINPP1	Q9UNW1	487 aa		10.64	□□□□□ -0.71
HDLBP-233	ENST00000470710	C10orf71	Q711Q0	1435 aa		10.64	□□□□□ -0.71
HDLBP-233	ENST00000470710	COL4A1	P02462	1669 aa		10.63	□□□□□ -0.71
HDLBP-233	ENST00000470710	SLC5A1	P13866	664 aa		10.63	□□□□□ -0.71
HDLBP-233	ENST00000470710	SDS	P20132	328 aa		10.63	□□□□□ -0.71
HDLBP-233	ENST00000470710	UBE4A	Q14139	1066 aa		10.63	□□□□□ -0.71
HDLBP-233	ENST00000470710	R3HDM1	Q15032	1099 aa	Known RBP	10.63	□□□□□ -0.71
HDLBP-233	ENST00000470710	HELB	Q8NG08	1087 aa	Predicted RBP	10.63	□□□□□ -0.71
HDLBP-233	ENST00000470710	XAGE2	Q96GT9	111 aa		10.63	□□□□□ -0.71
HDLBP-233	ENST00000470710	MASTL	Q96GX5	879 aa		10.63	□□□□□ -0.71
HDLBP-233	ENST00000470710	ZNF512B	Q96KM6	892 aa	Predicted RBP	10.63	□□□□□ -0.71
HDLBP-233	ENST00000470710	CDC45	O75419	566 aa		10.62	□□□□□ -0.71
HDLBP-233	ENST00000470710	IFIT1	P09914	478 aa	Known RBP	10.62	□□□□□ -0.71
HDLBP-233	ENST00000470710	ADORA1	P30542	326 aa		10.62	□□□□□ -0.71
HDLBP-233	ENST00000470710	ALDH1B1	P30837	517 aa		10.62	□□□□□ -0.71
HDLBP-233	ENST00000470710	CCDC158	Q5M9N0	1113 aa		10.62	□□□□□ -0.71
HDLBP-233	ENST00000470710	STYK1	Q6J9G0	422 aa		10.62	□□□□□ -0.71
HDLBP-233	ENST00000470710	ILDR2	Q71H61	639 aa		10.62	□□□□□ -0.71
HDLBP-233	ENST00000470710	C2CD5	Q86YS7	1000 aa		10.62	□□□□□ -0.71
HDLBP-233	ENST00000470710	HAUS7	Q99871	368 aa		10.62	□□□□□ -0.71
HDLBP-233	ENST00000470710	CASZ1	Q86V15	1759 aa		10.62	□□□□□ -0.71
HDLBP-233	ENST00000470710		H0YIN7	160 aa		10.61	□□□□□ -0.71
HDLBP-233	ENST00000470710	TAF5L	O75529	589 aa		10.61	□□□□□ -0.71
HDLBP-233	ENST00000470710	ZBTB7A	O95365	584 aa		10.61	□□□□□ -0.71
HDLBP-233	ENST00000470710	POLD1	P28340	1107 aa		10.61	□□□□□ -0.71
HDLBP-233	ENST00000470710	GORAB	Q5T7V8	394 aa		10.61	□□□□□ -0.71
HDLBP-233	ENST00000470710	TICAM2	Q86XR7	235 aa		10.61	□□□□□ -0.71
HDLBP-233	ENST00000470710	CNTROB	Q8N137	903 aa		10.61	□□□□□ -0.71
HDLBP-233	ENST00000470710	EVI5L	Q96CN4	794 aa		10.61	□□□□□ -0.71
HDLBP-233	ENST00000470710	XDH	P47989	1333 aa		10.6	□□□□□ -0.71
HDLBP-233	ENST00000470710	ANKRD31	Q8N7Z5	1873 aa		10.6	□□□□□ -0.71
HDLBP-233	ENST00000470710	TRIM6-TRIM34	B2RNG4	842 aa		10.6	□□□□□ -0.71
HDLBP-233	ENST00000470710	PPEF1	O14829	653 aa	Predicted RBP	10.6	□□□□□ -0.71
HDLBP-233	ENST00000470710	ZBTB22	O15209	634 aa		10.6	□□□□□ -0.71
HDLBP-233	ENST00000470710	EIF5B	O60841	1220 aa	Known RBP	10.6	□□□□□ -0.71
HDLBP-233	ENST00000470710	UQCRFS1P1	P0C7P4	283 aa		10.6	□□□□□ -0.71
HDLBP-233	ENST00000470710	TTC39A	Q5SRH9	613 aa		10.6	□□□□□ -0.71
HDLBP-233	ENST00000470710	TBC1D9	Q6ZT07	1266 aa		10.6	□□□□□ -0.71
HDLBP-233	ENST00000470710	SP8	Q8IXZ3	490 aa		10.6	□□□□□ -0.71
HDLBP-233	ENST00000470710	SGIP1	Q9BQI5	828 aa		10.6	□□□□□ -0.71
HDLBP-233	ENST00000470710	BOLA2	Q9H3K6	86 aa		10.6	□□□□□ -0.71
HDLBP-233	ENST00000470710	PODXL2	Q9NZ53	605 aa		10.6	□□□□□ -0.71
HDLBP-233	ENST00000470710	LEMD3	Q9Y2U8	911 aa		10.6	□□□□□ -0.71
HDLBP-233	ENST00000470710	ATP6V0A2	Q9Y487	856 aa		10.6	□□□□□ -0.71
HDLBP-233	ENST00000470710	SNAP23	O00161	211 aa		10.59	□□□□□ -0.71
HDLBP-233	ENST00000470710	ARID4A	P29374	1257 aa	Predicted RBP	10.59	□□□□□ -0.71
HDLBP-233	ENST00000470710	KCNJ4	P48050	445 aa		10.59	□□□□□ -0.71
HDLBP-233	ENST00000470710	CCDC102B	Q68D86	513 aa		10.59	□□□□□ -0.71
HDLBP-233	ENST00000470710	CASC1	Q6TDU7	716 aa		10.59	□□□□□ -0.71
HDLBP-233	ENST00000470710	C15orf52	Q6ZUT6	534 aa	Known RBP	10.59	□□□□□ -0.71
HDLBP-233	ENST00000470710	CNKSR1	Q969H4	720 aa		10.59	□□□□□ -0.71
HDLBP-233	ENST00000470710	RILPL2	Q969X0	211 aa		10.59	□□□□□ -0.71
HDLBP-233	ENST00000470710	TSHZ2	Q9NRE2	1034 aa		10.59	□□□□□ -0.71
HDLBP-233	ENST00000470710	ATF5	Q9Y2D1	282 aa	Predicted RBP	10.59	□□□□□ -0.71
HDLBP-233	ENST00000470710	ZNF804B	A4D1E1	1349 aa		10.58	□□□□□ -0.71
HDLBP-233	ENST00000470710	RFX7	Q2KHR2	1363 aa		10.58	□□□□□ -0.72
HDLBP-233	ENST00000470710	ATP2B4	P23634	1241 aa		10.58	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms