RNA–Protein interactions for RNA: ENST00000470695.1

IFT88-205, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-205ENST00000470695 R3HDM1Q15032 1099 aaKnown RBP15.35■□□□□ 0.05
IFT88-205ENST00000470695 METTL24Q5JXM2 366 aa15.35■□□□□ 0.05
IFT88-205ENST00000470695 AACSQ86V21 672 aa15.35■□□□□ 0.05
IFT88-205ENST00000470695 POTEDQ86YR6 584 aa15.35■□□□□ 0.05
IFT88-205ENST00000470695 VGLL2Q8N8G2 317 aa15.35■□□□□ 0.05
IFT88-205ENST00000470695 OTUD7AQ8TE49 926 aaPredicted RBP15.35■□□□□ 0.05
IFT88-205ENST00000470695 CELF1Q92879 486 aaKnown RBP15.35■□□□□ 0.05
IFT88-205ENST00000470695 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.35■□□□□ 0.05
IFT88-205ENST00000470695 PDE8BO95263 885 aa15.34■□□□□ 0.05
IFT88-205ENST00000470695 NPR1P16066 1061 aa15.34■□□□□ 0.05
IFT88-205ENST00000470695 TMC4Q7Z404 712 aa15.34■□□□□ 0.05
IFT88-205ENST00000470695 GPATCH3Q96I76 525 aa15.34■□□□□ 0.05
IFT88-205ENST00000470695 ZNF609O15014 1411 aa15.34■□□□□ 0.05
IFT88-205ENST00000470695 BBOX1O75936 387 aa15.33■□□□□ 0.04
IFT88-205ENST00000470695 SRGNP10124 158 aa15.33■□□□□ 0.04
IFT88-205ENST00000470695 POLD1P28340 1107 aa15.33■□□□□ 0.04
IFT88-205ENST00000470695 BMP2KLQ5H9B9 411 aa15.33■□□□□ 0.04
IFT88-205ENST00000470695 TTC22Q5TAA0 569 aa15.33■□□□□ 0.04
IFT88-205ENST00000470695 MASTLQ96GX5 879 aa15.33■□□□□ 0.04
IFT88-205ENST00000470695 ECHDC1Q9NTX5 307 aa15.33■□□□□ 0.04
IFT88-205ENST00000470695 C10orf71Q711Q0 1435 aa15.33■□□□□ 0.04
IFT88-205ENST00000470695 A0A1B0GUL7 405 aa15.32■□□□□ 0.04
IFT88-205ENST00000470695 ERC2O15083 957 aa15.32■□□□□ 0.04
IFT88-205ENST00000470695 ALDH1B1P30837 517 aa15.32■□□□□ 0.04
IFT88-205ENST00000470695 CHRNDQ07001 517 aa15.32■□□□□ 0.04
IFT88-205ENST00000470695 PUM3Q15397 648 aaKnown RBP15.32■□□□□ 0.04
IFT88-205ENST00000470695 ANKRD2Q9GZV1 360 aa15.32■□□□□ 0.04
IFT88-205ENST00000470695 MINPP1Q9UNW1 487 aa15.32■□□□□ 0.04
IFT88-205ENST00000470695 COL4A1P02462 1669 aa15.32■□□□□ 0.04
IFT88-205ENST00000470695 H0YIN7 160 aa15.31■□□□□ 0.04
IFT88-205ENST00000470695 GLRX3O76003 335 aaKnown RBP15.31■□□□□ 0.04
IFT88-205ENST00000470695 ZBTB7AO95365 584 aa15.31■□□□□ 0.04
IFT88-205ENST00000470695 FGFR2P21802 821 aa15.31■□□□□ 0.04
IFT88-205ENST00000470695 ATP2B3Q16720 1220 aa15.31■□□□□ 0.04
IFT88-205ENST00000470695 STYK1Q6J9G0 422 aa15.31■□□□□ 0.04
IFT88-205ENST00000470695 LPIN2Q92539 896 aa15.31■□□□□ 0.04
IFT88-205ENST00000470695 CCDC8Q9H0W5 538 aaPredicted RBP15.31■□□□□ 0.04
IFT88-205ENST00000470695 BCL11AQ9H165 835 aa15.31■□□□□ 0.04
IFT88-205ENST00000470695 DBNLQ9UJU6 430 aaKnown RBP15.31■□□□□ 0.04
IFT88-205ENST00000470695 SPEF2Q9C093 1822 aa15.31■□□□□ 0.04
IFT88-205ENST00000470695 TAF1P21675 1872 aa15.3■□□□□ 0.04
IFT88-205ENST00000470695 TIMM10P62072 90 aa15.3■□□□□ 0.04
IFT88-205ENST00000470695 UBE4AQ14139 1066 aa15.3■□□□□ 0.04
IFT88-205ENST00000470695 C2CD5Q86YS7 1000 aa15.3■□□□□ 0.04
IFT88-205ENST00000470695 PI4K2BQ8TCG2 481 aa15.3■□□□□ 0.04
IFT88-205ENST00000470695 NEUROD6Q96NK8 337 aa15.3■□□□□ 0.04
IFT88-205ENST00000470695 SLC5A1P13866 664 aa15.29■□□□□ 0.04
IFT88-205ENST00000470695 ATP5JP18859 108 aa15.29■□□□□ 0.04
IFT88-205ENST00000470695 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.29■□□□□ 0.04
IFT88-205ENST00000470695 SGIP1Q9BQI5 828 aa15.29■□□□□ 0.04
IFT88-205ENST00000470695 DBNDD2Q9BQY9 259 aa15.29■□□□□ 0.04
IFT88-205ENST00000470695 TLR7Q9NYK1 1049 aaKnown RBP15.29■□□□□ 0.04
IFT88-205ENST00000470695 KIF13BQ9NQT8 1826 aa15.29■□□□□ 0.04
IFT88-205ENST00000470695 A0A1B0GUL6 1792 aa15.29■□□□□ 0.04
IFT88-205ENST00000470695 PSDA5PKW4 1024 aaPredicted RBP15.28■□□□□ 0.04
IFT88-205ENST00000470695 IFIT1P09914 478 aaKnown RBP15.28■□□□□ 0.04
IFT88-205ENST00000470695 GSPT1P15170 499 aaKnown RBP15.28■□□□□ 0.04
IFT88-205ENST00000470695 CCDC158Q5M9N0 1113 aa15.28■□□□□ 0.04
IFT88-205ENST00000470695 SP8Q8IXZ3 490 aa15.28■□□□□ 0.04
IFT88-205ENST00000470695 CNKSR1Q969H4 720 aa15.28■□□□□ 0.04
IFT88-205ENST00000470695 XAGE2Q96GT9 111 aa15.28■□□□□ 0.04
IFT88-205ENST00000470695 ZNF512BQ96KM6 892 aaPredicted RBP15.28■□□□□ 0.04
IFT88-205ENST00000470695 ATF5Q9Y2D1 282 aaPredicted RBP15.28■□□□□ 0.04
IFT88-205ENST00000470695 COL11A2P13942 1736 aaPredicted RBP15.28■□□□□ 0.04
IFT88-205ENST00000470695 ARAP2Q8WZ64 1704 aa15.28■□□□□ 0.04
IFT88-205ENST00000470695 PPEF1O14829 653 aaPredicted RBP15.27■□□□□ 0.04
IFT88-205ENST00000470695 TAF5LO75529 589 aa15.27■□□□□ 0.04
IFT88-205ENST00000470695 HELBQ8NG08 1087 aaPredicted RBP15.27■□□□□ 0.04
IFT88-205ENST00000470695 LEMD3Q9Y2U8 911 aa15.27■□□□□ 0.04
IFT88-205ENST00000470695 ATP6V0A2Q9Y487 856 aa15.27■□□□□ 0.04
IFT88-205ENST00000470695 LRRC37AA6NMS7 1700 aa15.26■□□□□ 0.03
IFT88-205ENST00000470695 XDHP47989 1333 aa15.26■□□□□ 0.03
IFT88-205ENST00000470695 TGFB2P61812 414 aa15.26■□□□□ 0.03
IFT88-205ENST00000470695 TSHZ3Q63HK5 1081 aa15.26■□□□□ 0.03
IFT88-205ENST00000470695 PODXL2Q9NZ53 605 aa15.26■□□□□ 0.03
IFT88-205ENST00000470695 ZBTB22O15209 634 aa15.25■□□□□ 0.03
IFT88-205ENST00000470695 SDSP20132 328 aa15.25■□□□□ 0.03
IFT88-205ENST00000470695 ADORA1P30542 326 aa15.25■□□□□ 0.03
IFT88-205ENST00000470695 PTGER2P43116 358 aa15.25■□□□□ 0.03
IFT88-205ENST00000470695 GORABQ5T7V8 394 aa15.25■□□□□ 0.03
IFT88-205ENST00000470695 ZNF622Q969S3 477 aaKnown RBP eCLIP15.25■□□□□ 0.03
IFT88-205ENST00000470695 DLEC1Q9Y238 1755 aa15.24■□□□□ 0.03
IFT88-205ENST00000470695 UQCRFS1P1P0C7P4 283 aa15.24■□□□□ 0.03
IFT88-205ENST00000470695 ATP2B4P23634 1241 aa15.24■□□□□ 0.03
IFT88-205ENST00000470695 CHRNA5P30532 468 aa15.24■□□□□ 0.03
IFT88-205ENST00000470695 C8orf34Q49A92 452 aa15.24■□□□□ 0.03
IFT88-205ENST00000470695 TTC39AQ5SRH9 613 aa15.24■□□□□ 0.03
IFT88-205ENST00000470695 C15orf52Q6ZUT6 534 aaKnown RBP15.24■□□□□ 0.03
IFT88-205ENST00000470695 TICAM2Q86XR7 235 aa15.24■□□□□ 0.03
IFT88-205ENST00000470695 CNTROBQ8N137 903 aa15.24■□□□□ 0.03
IFT88-205ENST00000470695 HAUS7Q99871 368 aa15.24■□□□□ 0.03
IFT88-205ENST00000470695 TMX4Q9H1E5 349 aaPredicted RBP15.24■□□□□ 0.03
IFT88-205ENST00000470695 CD2APQ9Y5K6 639 aa15.24■□□□□ 0.03
IFT88-205ENST00000470695 ZNF804BA4D1E1 1349 aa15.23■□□□□ 0.03
IFT88-205ENST00000470695 ARID4AP29374 1257 aaPredicted RBP15.23■□□□□ 0.03
IFT88-205ENST00000470695 KCNJ4P48050 445 aa15.23■□□□□ 0.03
IFT88-205ENST00000470695 GRIPAP1Q4V328 841 aa15.23■□□□□ 0.03
IFT88-205ENST00000470695 CCDC102BQ68D86 513 aa15.23■□□□□ 0.03
IFT88-205ENST00000470695 CC2D2BQ6DHV5 1058 aa15.23■□□□□ 0.03
IFT88-205ENST00000470695 EVI5LQ96CN4 794 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms