RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 MICALL1Q8N3F8 863 aa7.66□□□□□ -1.18
COL9A1-206ENST00000470652 NACC1Q96RE7 527 aa7.66□□□□□ -1.18
COL9A1-206ENST00000470652 ZFP64Q9NPA5 681 aa7.66□□□□□ -1.18
COL9A1-206ENST00000470652 STARD13Q9Y3M8 1113 aa7.66□□□□□ -1.18
COL9A1-206ENST00000470652 PDGFAP04085 211 aa7.65□□□□□ -1.18
COL9A1-206ENST00000470652 SOX18P35713 384 aa7.65□□□□□ -1.18
COL9A1-206ENST00000470652 NRLP54845 237 aa7.65□□□□□ -1.18
COL9A1-206ENST00000470652 GPLD1P80108 840 aa7.65□□□□□ -1.18
COL9A1-206ENST00000470652 PRSS36Q5K4E3 855 aa7.65□□□□□ -1.18
COL9A1-206ENST00000470652 PDE12Q6L8Q7 609 aaKnown RBP7.65□□□□□ -1.18
COL9A1-206ENST00000470652 GLYCTKQ8IVS8 523 aa7.65□□□□□ -1.18
COL9A1-206ENST00000470652 EDEM1Q92611 657 aa7.65□□□□□ -1.18
COL9A1-206ENST00000470652 PRDM6Q9NQX0 595 aa7.65□□□□□ -1.18
COL9A1-206ENST00000470652 H3BRB1 525 aa7.64□□□□□ -1.19
COL9A1-206ENST00000470652 MMP20O60882 483 aa7.64□□□□□ -1.19
COL9A1-206ENST00000470652 ALBP02768 609 aa7.64□□□□□ -1.19
COL9A1-206ENST00000470652 USP5P45974 858 aa7.64□□□□□ -1.19
COL9A1-206ENST00000470652 PLAURQ03405 335 aa7.64□□□□□ -1.19
COL9A1-206ENST00000470652 ARTNQ5T4W7 220 aa7.64□□□□□ -1.19
COL9A1-206ENST00000470652 TTC39BQ5VTQ0 682 aaPredicted RBP7.64□□□□□ -1.19
COL9A1-206ENST00000470652 FAM35AQ86V20 835 aa7.64□□□□□ -1.19
COL9A1-206ENST00000470652 TUT1Q9H6E5 874 aaKnown RBP7.64□□□□□ -1.19
COL9A1-206ENST00000470652 GNEQ9Y223 722 aaKnown RBP7.64□□□□□ -1.19
COL9A1-206ENST00000470652 ZBTB42B2RXF5 422 aa7.63□□□□□ -1.19
COL9A1-206ENST00000470652 LILRB5O75023 590 aa7.63□□□□□ -1.19
COL9A1-206ENST00000470652 HOXD8P13378 290 aaPredicted RBP7.63□□□□□ -1.19
COL9A1-206ENST00000470652 C8orf34Q49A92 452 aa7.63□□□□□ -1.19
COL9A1-206ENST00000470652 TRAPPC3LQ5T215 181 aa7.63□□□□□ -1.19
COL9A1-206ENST00000470652 XKR5Q6UX68 686 aa7.63□□□□□ -1.19
COL9A1-206ENST00000470652 C20orf204Q6ZNR8 217 aa7.63□□□□□ -1.19
COL9A1-206ENST00000470652 NBPF11Q86T75 865 aa7.63□□□□□ -1.19
COL9A1-206ENST00000470652 TRAIPQ9BWF2 469 aa7.63□□□□□ -1.19
COL9A1-206ENST00000470652 ELP3Q9H9T3 547 aa7.63□□□□□ -1.19
COL9A1-206ENST00000470652 ABI2Q9NYB9 513 aaPredicted RBP7.63□□□□□ -1.19
COL9A1-206ENST00000470652 POLIQ9UNA4 740 aa7.63□□□□□ -1.19
COL9A1-206ENST00000470652 CPB1P15086 417 aa7.62□□□□□ -1.19
COL9A1-206ENST00000470652 EHHADHQ08426 723 aa7.62□□□□□ -1.19
COL9A1-206ENST00000470652 PSAPL1Q6NUJ1 521 aa7.62□□□□□ -1.19
COL9A1-206ENST00000470652 ZNF438Q7Z4V0 828 aa7.62□□□□□ -1.19
COL9A1-206ENST00000470652 OR13H1Q8NG92 308 aa7.62□□□□□ -1.19
COL9A1-206ENST00000470652 FRRS1LQ9P0K9 344 aa7.62□□□□□ -1.19
COL9A1-206ENST00000470652 LOC102724428A0A0B4J2F2 783 aa7.61□□□□□ -1.19
COL9A1-206ENST00000470652 FZD6O60353 706 aa7.61□□□□□ -1.19
COL9A1-206ENST00000470652 RGS9O75916 674 aaPredicted RBP7.61□□□□□ -1.19
COL9A1-206ENST00000470652 NID1P14543 1247 aa7.61□□□□□ -1.19
COL9A1-206ENST00000470652 SIK1P57059 783 aa7.61□□□□□ -1.19
COL9A1-206ENST00000470652 ELMSAN1Q6PJG2 1045 aa7.61□□□□□ -1.19
COL9A1-206ENST00000470652 GGNBP2Q9H3C7 697 aa7.61□□□□□ -1.19
COL9A1-206ENST00000470652 JPH1Q9HDC5 661 aaPredicted RBP7.61□□□□□ -1.19
COL9A1-206ENST00000470652 NAGPAQ9UK23 515 aa7.61□□□□□ -1.19
COL9A1-206ENST00000470652 C9orf172C9J069 976 aa7.6□□□□□ -1.19
COL9A1-206ENST00000470652 MLLT1Q03111 559 aaPredicted RBP7.6□□□□□ -1.19
COL9A1-206ENST00000470652 KCNA1Q09470 495 aa7.6□□□□□ -1.19
COL9A1-206ENST00000470652 ECM1Q16610 540 aa7.6□□□□□ -1.19
COL9A1-206ENST00000470652 HFE2Q6ZVN8 426 aa7.6□□□□□ -1.19
COL9A1-206ENST00000470652 NUDT8Q8WV74 236 aa7.6□□□□□ -1.19
COL9A1-206ENST00000470652 RBSNQ9H1K0 784 aa7.6□□□□□ -1.19
COL9A1-206ENST00000470652 CCDC87Q9NVE4 849 aa7.6□□□□□ -1.19
COL9A1-206ENST00000470652 BRPF3Q9ULD4 1205 aa7.6□□□□□ -1.19
COL9A1-206ENST00000470652 PATL2C9JE40 543 aaKnown RBP7.59□□□□□ -1.19
COL9A1-206ENST00000470652 ARHGAP4P98171 946 aa7.59□□□□□ -1.19
COL9A1-206ENST00000470652 HYAL2Q12891 473 aa7.59□□□□□ -1.19
COL9A1-206ENST00000470652 PERM1Q5SV97 790 aa7.59□□□□□ -1.19
COL9A1-206ENST00000470652 TTC9Q92623 222 aa7.59□□□□□ -1.19
COL9A1-206ENST00000470652 PMEPA1Q969W9 287 aa7.59□□□□□ -1.19
COL9A1-206ENST00000470652 NSUN5Q96P11 429 aaKnown RBP7.59□□□□□ -1.19
COL9A1-206ENST00000470652 TMEM63CQ9P1W3 806 aa7.59□□□□□ -1.19
COL9A1-206ENST00000470652 SOWAHDA6NJG2 315 aa7.58□□□□□ -1.2
COL9A1-206ENST00000470652 NDUFB5O43674 189 aa7.58□□□□□ -1.2
COL9A1-206ENST00000470652 GHRHP01286 108 aa7.58□□□□□ -1.2
COL9A1-206ENST00000470652 PDIA4P13667 645 aaKnown RBP7.58□□□□□ -1.2
COL9A1-206ENST00000470652 EIF2AK2P19525 551 aaKnown RBP7.58□□□□□ -1.2
COL9A1-206ENST00000470652 KRTAP1-3Q8IUG1 177 aa7.58□□□□□ -1.2
COL9A1-206ENST00000470652 GJD3Q8N144 294 aa7.58□□□□□ -1.2
COL9A1-206ENST00000470652 SPACA7Q96KW9 195 aa7.58□□□□□ -1.2
COL9A1-206ENST00000470652 LPIN3Q9BQK8 851 aa7.58□□□□□ -1.2
COL9A1-206ENST00000470652 A6NHS1 94 aa7.57□□□□□ -1.2
COL9A1-206ENST00000470652 J3QW42 95 aa7.57□□□□□ -1.2
COL9A1-206ENST00000470652 SELPP16109 830 aa7.57□□□□□ -1.2
COL9A1-206ENST00000470652 AFF1P51825 1210 aaKnown RBP7.57□□□□□ -1.2
COL9A1-206ENST00000470652 ADGRE1Q14246 886 aa7.57□□□□□ -1.2
COL9A1-206ENST00000470652 PLD4Q96BZ4 506 aa7.57□□□□□ -1.2
COL9A1-206ENST00000470652 CITED4Q96RK1 184 aa7.57□□□□□ -1.2
COL9A1-206ENST00000470652 SMG9Q9H0W8 520 aaKnown RBP7.57□□□□□ -1.2
COL9A1-206ENST00000470652 A0A0A0MRY4 1105 aa7.56□□□□□ -1.2
COL9A1-206ENST00000470652 KIF4AO95239 1232 aa7.56□□□□□ -1.2
COL9A1-206ENST00000470652 H2AFB1P0C5Y9 115 aa7.56□□□□□ -1.2
COL9A1-206ENST00000470652 H2AFB2P0C5Z0 115 aa7.56□□□□□ -1.2
COL9A1-206ENST00000470652 ELNP15502 786 aa7.56□□□□□ -1.2
COL9A1-206ENST00000470652 CES1P23141 567 aa7.56□□□□□ -1.2
COL9A1-206ENST00000470652 MBTPS1Q14703 1052 aa7.56□□□□□ -1.2
COL9A1-206ENST00000470652 C1orf127Q8N9H9 656 aa7.56□□□□□ -1.2
COL9A1-206ENST00000470652 CNTN3Q9P232 1028 aa7.56□□□□□ -1.2
COL9A1-206ENST00000470652 TNFRSF21O75509 655 aa7.55□□□□□ -1.2
COL9A1-206ENST00000470652 CYP2E1P05181 493 aaPredicted RBP7.55□□□□□ -1.2
COL9A1-206ENST00000470652 PDE3BQ13370 1112 aa7.55□□□□□ -1.2
COL9A1-206ENST00000470652 SHISA2Q6UWI4 295 aa7.55□□□□□ -1.2
COL9A1-206ENST00000470652 TXNRD3Q86VQ6 643 aa7.55□□□□□ -1.2
COL9A1-206ENST00000470652 NCAPG2Q86XI2 1143 aa7.55□□□□□ -1.2
COL9A1-206ENST00000470652 SNX29Q8TEQ0 813 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms