RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 CHRDQ9H2X0 955 aa10.06□□□□□ -0.8
SSB-209ENST00000470621 KANSL3Q9P2N6 904 aa10.06□□□□□ -0.8
SSB-209ENST00000470621 J3QW42 95 aa10.05□□□□□ -0.8
SSB-209ENST00000470621 TNFRSF21O75509 655 aa10.05□□□□□ -0.8
SSB-209ENST00000470621 PSAPP07602 524 aa10.05□□□□□ -0.8
SSB-209ENST00000470621 SOX18P35713 384 aa10.05□□□□□ -0.8
SSB-209ENST00000470621 NRLP54845 237 aa10.05□□□□□ -0.8
SSB-209ENST00000470621 FAM35AQ86V20 835 aa10.05□□□□□ -0.8
SSB-209ENST00000470621 DCTN4Q9UJW0 460 aa10.05□□□□□ -0.8
SSB-209ENST00000470621 MKL2Q9ULH7 1088 aa10.05□□□□□ -0.8
SSB-209ENST00000470621 ALAS2P22557 587 aa10.04□□□□□ -0.8
SSB-209ENST00000470621 MAPK1P28482 360 aa10.04□□□□□ -0.8
SSB-209ENST00000470621 DGKGP49619 791 aa10.04□□□□□ -0.8
SSB-209ENST00000470621 PLAURQ03405 335 aa10.04□□□□□ -0.8
SSB-209ENST00000470621 TTC39BQ5VTQ0 682 aaPredicted RBP10.04□□□□□ -0.8
SSB-209ENST00000470621 SND1Q7KZF4 910 aaKnown RBP eCLIP10.04□□□□□ -0.8
SSB-209ENST00000470621 ALYREFQ86V81 257 aaKnown RBP10.04□□□□□ -0.8
SSB-209ENST00000470621 TTC16Q8NEE8 873 aa10.04□□□□□ -0.8
SSB-209ENST00000470621 RBCK1Q9BYM8 510 aa10.04□□□□□ -0.8
SSB-209ENST00000470621 RRAGCQ9HB90 399 aa10.04□□□□□ -0.8
SSB-209ENST00000470621 KRBA1A5PL33 1030 aa10.03□□□□□ -0.8
SSB-209ENST00000470621 HOXD8P13378 290 aaPredicted RBP10.03□□□□□ -0.8
SSB-209ENST00000470621 EHHADHQ08426 723 aa10.03□□□□□ -0.8
SSB-209ENST00000470621 PERM1Q5SV97 790 aa10.03□□□□□ -0.8
SSB-209ENST00000470621 TMC7Q7Z402 723 aa10.03□□□□□ -0.8
SSB-209ENST00000470621 NUDT8Q8WV74 236 aa10.03□□□□□ -0.8
SSB-209ENST00000470621 GZF1Q9H116 711 aaPredicted RBP10.03□□□□□ -0.8
SSB-209ENST00000470621 M0R082 166 aa10.02□□□□□ -0.81
SSB-209ENST00000470621 PSAPL1Q6NUJ1 521 aa10.02□□□□□ -0.81
SSB-209ENST00000470621 C20orf204Q6ZNR8 217 aa10.02□□□□□ -0.81
SSB-209ENST00000470621 ZNF417Q8TAU3 575 aa10.02□□□□□ -0.81
SSB-209ENST00000470621 TMC1Q8TDI8 760 aa10.02□□□□□ -0.81
SSB-209ENST00000470621 ZNF587Q96SQ5 575 aaPredicted RBP10.02□□□□□ -0.81
SSB-209ENST00000470621 LPIN3Q9BQK8 851 aa10.02□□□□□ -0.81
SSB-209ENST00000470621 LOC102724428A0A0B4J2F2 783 aa10.01□□□□□ -0.81
SSB-209ENST00000470621 K7ELQ4 463 aaPredicted RBP10.01□□□□□ -0.81
SSB-209ENST00000470621 EREGO14944 169 aa10.01□□□□□ -0.81
SSB-209ENST00000470621 ACPPP15309 386 aa10.01□□□□□ -0.81
SSB-209ENST00000470621 EIF2AK2P19525 551 aaKnown RBP10.01□□□□□ -0.81
SSB-209ENST00000470621 SIK1P57059 783 aa10.01□□□□□ -0.81
SSB-209ENST00000470621 ORC1Q13415 861 aa10.01□□□□□ -0.81
SSB-209ENST00000470621 MICALL1Q8N3F8 863 aa10.01□□□□□ -0.81
SSB-209ENST00000470621 SNX29Q8TEQ0 813 aa10.01□□□□□ -0.81
SSB-209ENST00000470621 PHACTR2O75167 634 aa10□□□□□ -0.81
SSB-209ENST00000470621 KIF4AO95239 1232 aa10□□□□□ -0.81
SSB-209ENST00000470621 BAG6P46379 1132 aa10□□□□□ -0.81
SSB-209ENST00000470621 CES1P23141 567 aa9.99□□□□□ -0.81
SSB-209ENST00000470621 COL8A1P27658 744 aa9.99□□□□□ -0.81
SSB-209ENST00000470621 ATP11AP98196 1134 aa9.99□□□□□ -0.81
SSB-209ENST00000470621 PDE3BQ13370 1112 aa9.99□□□□□ -0.81
SSB-209ENST00000470621 COL9A3Q14050 684 aaPredicted RBP9.99□□□□□ -0.81
SSB-209ENST00000470621 USPL1Q5W0Q7 1092 aa9.99□□□□□ -0.81
SSB-209ENST00000470621 LINC00114Q6XXX2 140 aa9.99□□□□□ -0.81
SSB-209ENST00000470621 CITED4Q96RK1 184 aa9.99□□□□□ -0.81
SSB-209ENST00000470621 NIF3L1Q9GZT8 377 aa9.99□□□□□ -0.81
SSB-209ENST00000470621 JPH1Q9HDC5 661 aaPredicted RBP9.99□□□□□ -0.81
SSB-209ENST00000470621 HYAL2Q12891 473 aa9.98□□□□□ -0.81
SSB-209ENST00000470621 PCSK7Q16549 785 aa9.98□□□□□ -0.81
SSB-209ENST00000470621 ELMSAN1Q6PJG2 1045 aa9.98□□□□□ -0.81
SSB-209ENST00000470621 SMG9Q9H0W8 520 aaKnown RBP9.98□□□□□ -0.81
SSB-209ENST00000470621 SALL4Q9UJQ4 1053 aa9.98□□□□□ -0.81
SSB-209ENST00000470621 POLR3DP05423 398 aaPredicted RBP9.97□□□□□ -0.81
SSB-209ENST00000470621 ADAMTSL4Q6UY14 1074 aa9.97□□□□□ -0.81
SSB-209ENST00000470621 PLD4Q96BZ4 506 aa9.97□□□□□ -0.81
SSB-209ENST00000470621 ZFYVE28Q9HCC9 887 aa9.97□□□□□ -0.81
SSB-209ENST00000470621 TRPA1O75762 1119 aa9.96□□□□□ -0.82
SSB-209ENST00000470621 GHRHP01286 108 aa9.96□□□□□ -0.82
SSB-209ENST00000470621 GRIK5Q16478 980 aa9.96□□□□□ -0.82
SSB-209ENST00000470621 NCAPG2Q86XI2 1143 aa9.96□□□□□ -0.82
SSB-209ENST00000470621 ALKBH8Q96BT7 664 aaKnown RBP9.96□□□□□ -0.82
SSB-209ENST00000470621 TRIM11Q96F44 468 aa9.96□□□□□ -0.82
SSB-209ENST00000470621 DMRTB1Q96MA1 342 aa9.96□□□□□ -0.82
SSB-209ENST00000470621 SUV39H2Q9H5I1 410 aa9.96□□□□□ -0.82
SSB-209ENST00000470621 LATS2Q9NRM7 1088 aa9.96□□□□□ -0.82
SSB-209ENST00000470621 RGS9O75916 674 aaPredicted RBP9.95□□□□□ -0.82
SSB-209ENST00000470621 NID1P14543 1247 aa9.95□□□□□ -0.82
SSB-209ENST00000470621 AFF1P51825 1210 aaKnown RBP9.95□□□□□ -0.82
SSB-209ENST00000470621 TRIM26Q12899 539 aaPredicted RBP9.95□□□□□ -0.82
SSB-209ENST00000470621 CEP120Q8N960 986 aa9.95□□□□□ -0.82
SSB-209ENST00000470621 ASB16Q96NS5 453 aa9.95□□□□□ -0.82
SSB-209ENST00000470621 RASSF4Q9H2L5 321 aa9.95□□□□□ -0.82
SSB-209ENST00000470621 FRRS1LQ9P0K9 344 aa9.95□□□□□ -0.82
SSB-209ENST00000470621 TREHO43280 583 aa9.94□□□□□ -0.82
SSB-209ENST00000470621 LILRB5O75023 590 aa9.94□□□□□ -0.82
SSB-209ENST00000470621 DSC3Q14574 896 aa9.94□□□□□ -0.82
SSB-209ENST00000470621 HHIPQ96QV1 700 aa9.94□□□□□ -0.82
SSB-209ENST00000470621 TRIM33Q9UPN9 1127 aa9.94□□□□□ -0.82
SSB-209ENST00000470621 AMOTL2Q9Y2J4 779 aa9.94□□□□□ -0.82
SSB-209ENST00000470621 PIK3R2O00459 728 aa9.93□□□□□ -0.82
SSB-209ENST00000470621 PRDM6Q9NQX0 595 aa9.93□□□□□ -0.82
SSB-209ENST00000470621 ZBTB7CA1YPR0 619 aa9.92□□□□□ -0.82
SSB-209ENST00000470621 EIF1AYO14602 144 aaKnown RBP9.92□□□□□ -0.82
SSB-209ENST00000470621 GNB5O14775 395 aa9.92□□□□□ -0.82
SSB-209ENST00000470621 PEAR1Q5VY43 1037 aaPredicted RBP9.92□□□□□ -0.82
SSB-209ENST00000470621 PMEPA1Q969W9 287 aa9.92□□□□□ -0.82
SSB-209ENST00000470621 SPACA7Q96KW9 195 aa9.92□□□□□ -0.82
SSB-209ENST00000470621 NFKBIEO00221 500 aa9.91□□□□□ -0.82
SSB-209ENST00000470621 CPNE3O75131 537 aaKnown RBP9.91□□□□□ -0.82
SSB-209ENST00000470621 FURINP09958 794 aa9.91□□□□□ -0.82
SSB-209ENST00000470621 GDF6Q6KF10 455 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms