RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 IRX2Q9BZI1 471 aaPredicted RBP8.51□□□□□ -1.05
RBM39-227ENST00000470563 AVENQ9NQS1 362 aaPredicted RBP8.51□□□□□ -1.05
RBM39-227ENST00000470563 PPP4R2Q9NY27 417 aa8.51□□□□□ -1.05
RBM39-227ENST00000470563 ZFATQ9P243 1243 aa8.51□□□□□ -1.05
RBM39-227ENST00000470563 HCN2Q9UL51 889 aa8.51□□□□□ -1.05
RBM39-227ENST00000470563 PHF24Q9UPV7 400 aa8.51□□□□□ -1.05
RBM39-227ENST00000470563 RARAP10276 462 aa8.5□□□□□ -1.05
RBM39-227ENST00000470563 ITGA6P23229 1130 aa8.5□□□□□ -1.05
RBM39-227ENST00000470563 SPEM2Q0P670 501 aa8.5□□□□□ -1.05
RBM39-227ENST00000470563 CCSER2Q9H7U1 834 aa8.5□□□□□ -1.05
RBM39-227ENST00000470563 SRA1Q9HD15 236 aaKnown RBP8.5□□□□□ -1.05
RBM39-227ENST00000470563 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.5□□□□□ -1.05
RBM39-227ENST00000470563 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.5□□□□□ -1.05
RBM39-227ENST00000470563 KHNYNO15037 678 aaKnown RBP8.49□□□□□ -1.05
RBM39-227ENST00000470563 SASH3O75995 380 aa8.49□□□□□ -1.05
RBM39-227ENST00000470563 PSAPP07602 524 aa8.49□□□□□ -1.05
RBM39-227ENST00000470563 PLAURQ03405 335 aa8.49□□□□□ -1.05
RBM39-227ENST00000470563 HYAL2Q12891 473 aa8.49□□□□□ -1.05
RBM39-227ENST00000470563 PCSK7Q16549 785 aa8.49□□□□□ -1.05
RBM39-227ENST00000470563 NXPE4Q6UWF7 544 aa8.49□□□□□ -1.05
RBM39-227ENST00000470563 CCNJLQ8IV13 435 aa8.49□□□□□ -1.05
RBM39-227ENST00000470563 TRPM4Q8TD43 1214 aa8.49□□□□□ -1.05
RBM39-227ENST00000470563 NANOS1Q8WY41 292 aaKnown RBP8.49□□□□□ -1.05
RBM39-227ENST00000470563 RSRP1Q9BUV0 290 aa8.49□□□□□ -1.05
RBM39-227ENST00000470563 BHLHE41Q9C0J9 482 aaPredicted RBP8.49□□□□□ -1.05
RBM39-227ENST00000470563 STRN4Q9NRL3 753 aa8.49□□□□□ -1.05
RBM39-227ENST00000470563 GADD45BO75293 160 aaPredicted RBP8.48□□□□□ -1.05
RBM39-227ENST00000470563 RLBP1P12271 317 aa8.48□□□□□ -1.05
RBM39-227ENST00000470563 ITPKAP23677 461 aa8.48□□□□□ -1.05
RBM39-227ENST00000470563 TARSP26639 723 aaKnown RBP8.48□□□□□ -1.05
RBM39-227ENST00000470563 GJA8P48165 433 aa8.48□□□□□ -1.05
RBM39-227ENST00000470563 GPLD1P80108 840 aa8.48□□□□□ -1.05
RBM39-227ENST00000470563 NEUROD1Q13562 356 aa8.48□□□□□ -1.05
RBM39-227ENST00000470563 PWP1Q13610 501 aa8.48□□□□□ -1.05
RBM39-227ENST00000470563 GNL2Q13823 731 aaKnown RBP8.48□□□□□ -1.05
RBM39-227ENST00000470563 CEP120Q8N960 986 aa8.48□□□□□ -1.05
RBM39-227ENST00000470563 TCF12Q99081 682 aa8.48□□□□□ -1.05
RBM39-227ENST00000470563 ABCB6Q9NP58 842 aa8.48□□□□□ -1.05
RBM39-227ENST00000470563 POLR3DP05423 398 aaPredicted RBP8.47□□□□□ -1.05
RBM39-227ENST00000470563 RPS26P11Q5JNZ5 115 aaPredicted RBP8.47□□□□□ -1.05
RBM39-227ENST00000470563 RIPOR1Q6ZS17 1223 aa8.47□□□□□ -1.05
RBM39-227ENST00000470563 KCNQ5Q9NR82 932 aa8.47□□□□□ -1.05
RBM39-227ENST00000470563 CUEDC1Q9NWM3 386 aaPredicted RBP8.47□□□□□ -1.05
RBM39-227ENST00000470563 USP35Q9P2H5 1018 aa8.47□□□□□ -1.05
RBM39-227ENST00000470563 SHROOM4Q9ULL8 1493 aa8.46□□□□□ -1.05
RBM39-227ENST00000470563 TMEM238LA0A1B0GVL6 79 aa8.46□□□□□ -1.06
RBM39-227ENST00000470563 DCDC2BA2VCK2 349 aa8.46□□□□□ -1.06
RBM39-227ENST00000470563 ST8SIA5O15466 376 aa8.46□□□□□ -1.06
RBM39-227ENST00000470563 CYP2E1P05181 493 aaPredicted RBP8.46□□□□□ -1.06
RBM39-227ENST00000470563 NFKB1P19838 968 aa8.46□□□□□ -1.06
RBM39-227ENST00000470563 MEI1Q5TIA1 1274 aa8.46□□□□□ -1.06
RBM39-227ENST00000470563 C9orf131Q5VYM1 1079 aa8.46□□□□□ -1.06
RBM39-227ENST00000470563 SV2BQ7L1I2 683 aa8.46□□□□□ -1.06
RBM39-227ENST00000470563 DHX32Q7L7V1 743 aaKnown RBP8.46□□□□□ -1.06
RBM39-227ENST00000470563 TMEM102Q8N9M5 508 aaPredicted RBP8.46□□□□□ -1.06
RBM39-227ENST00000470563 SPATA32Q96LK8 384 aa8.46□□□□□ -1.06
RBM39-227ENST00000470563 CNTNAP3BQ96NU0 1288 aa8.46□□□□□ -1.06
RBM39-227ENST00000470563 PNMA5Q96PV4 448 aa8.46□□□□□ -1.06
RBM39-227ENST00000470563 CNTNAP3Q9BZ76 1288 aa8.46□□□□□ -1.06
RBM39-227ENST00000470563 EHD4Q9H223 541 aa8.46□□□□□ -1.06
RBM39-227ENST00000470563 FGFR3P22607 806 aa8.45□□□□□ -1.06
RBM39-227ENST00000470563 RACK1P63244 317 aaKnown RBP8.45□□□□□ -1.06
RBM39-227ENST00000470563 USP48Q86UV5 1035 aa8.45□□□□□ -1.06
RBM39-227ENST00000470563 RASGRP4Q8TDF6 673 aa8.45□□□□□ -1.06
RBM39-227ENST00000470563 SLC30A3Q99726 388 aa8.45□□□□□ -1.06
RBM39-227ENST00000470563 LIN7BQ9HAP6 207 aa8.45□□□□□ -1.06
RBM39-227ENST00000470563 DZANK1Q9NVP4 752 aa8.45□□□□□ -1.06
RBM39-227ENST00000470563 NFKBIEO00221 500 aa8.44□□□□□ -1.06
RBM39-227ENST00000470563 SIN3BO75182 1162 aa8.44□□□□□ -1.06
RBM39-227ENST00000470563 MAP3K10Q02779 954 aa8.44□□□□□ -1.06
RBM39-227ENST00000470563 FOXR1Q6PIV2 292 aa8.44□□□□□ -1.06
RBM39-227ENST00000470563 ABHD17AQ96GS6 310 aa8.44□□□□□ -1.06
RBM39-227ENST00000470563 ZKSCAN3Q9BRR0 538 aa8.44□□□□□ -1.06
RBM39-227ENST00000470563 DACH1Q9UI36 760 aa8.44□□□□□ -1.06
RBM39-227ENST00000470563 GGT7Q9UJ14 662 aa8.44□□□□□ -1.06
RBM39-227ENST00000470563 LOC105371045A0A1W2PR82 267 aa8.43□□□□□ -1.06
RBM39-227ENST00000470563 ZNF468Q5VIY5 522 aaPredicted RBP8.43□□□□□ -1.06
RBM39-227ENST00000470563 TNFRSF25Q93038 417 aa8.43□□□□□ -1.06
RBM39-227ENST00000470563 TRERF1Q96PN7 1200 aa8.43□□□□□ -1.06
RBM39-227ENST00000470563 MDFIQ99750 246 aa8.43□□□□□ -1.06
RBM39-227ENST00000470563 CEP44Q9C0F1 390 aa8.43□□□□□ -1.06
RBM39-227ENST00000470563 ACBD3Q9H3P7 528 aa8.43□□□□□ -1.06
RBM39-227ENST00000470563 LATS2Q9NRM7 1088 aa8.43□□□□□ -1.06
RBM39-227ENST00000470563 KANSL3Q9P2N6 904 aa8.43□□□□□ -1.06
RBM39-227ENST00000470563 SOBPA7XYQ1 873 aa8.42□□□□□ -1.06
RBM39-227ENST00000470563 COL13A1Q5TAT6 717 aaPredicted RBP8.42□□□□□ -1.06
RBM39-227ENST00000470563 NCAPG2Q86XI2 1143 aa8.42□□□□□ -1.06
RBM39-227ENST00000470563 OSMRQ99650 979 aa8.42□□□□□ -1.06
RBM39-227ENST00000470563 OXCT2Q9BYC2 517 aaPredicted RBP8.42□□□□□ -1.06
RBM39-227ENST00000470563 ZNF394Q53GI3 561 aa8.41□□□□□ -1.06
RBM39-227ENST00000470563 KRT25Q7Z3Z0 450 aa8.41□□□□□ -1.06
RBM39-227ENST00000470563 NPAS3Q8IXF0 933 aa8.41□□□□□ -1.06
RBM39-227ENST00000470563 NXPE3Q969Y0 559 aa8.41□□□□□ -1.06
RBM39-227ENST00000470563 GTPBP3Q969Y2 492 aaKnown RBP8.41□□□□□ -1.06
RBM39-227ENST00000470563 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.41□□□□□ -1.06
RBM39-227ENST00000470563 LOC102724428A0A0B4J2F2 783 aa8.4□□□□□ -1.06
RBM39-227ENST00000470563 ADARB2-AS1A8MUL3 147 aa8.4□□□□□ -1.06
RBM39-227ENST00000470563 CD33P20138 364 aa8.4□□□□□ -1.06
RBM39-227ENST00000470563 SIK1P57059 783 aa8.4□□□□□ -1.06
RBM39-227ENST00000470563 RPS26P62854 115 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms