RNA–Protein interactions for RNA: ENST00000470470.1

CHD6-206, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 5

Gene CHD6, Length 1,349 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-206ENST00000470470 PRR36Q9H6K5 1346 aa8.07□□□□□ -1.12
CHD6-206ENST00000470470 IPO8O15397 1037 aaKnown RBP8.06□□□□□ -1.12
CHD6-206ENST00000470470 ZNF853P0CG23 659 aa8.06□□□□□ -1.12
CHD6-206ENST00000470470 RLBP1P12271 317 aa8.06□□□□□ -1.12
CHD6-206ENST00000470470 LTKP29376 864 aa8.06□□□□□ -1.12
CHD6-206ENST00000470470 SRSF11Q05519 484 aaKnown RBP8.06□□□□□ -1.12
CHD6-206ENST00000470470 LMOD3Q0VAK6 560 aa8.06□□□□□ -1.12
CHD6-206ENST00000470470 PLA2G4EQ3MJ16 856 aa8.06□□□□□ -1.12
CHD6-206ENST00000470470 ZBTB33Q86T24 672 aa8.06□□□□□ -1.12
CHD6-206ENST00000470470 DZIP1LQ8IYY4 767 aaKnown RBP8.06□□□□□ -1.12
CHD6-206ENST00000470470 LRRN4Q8WUT4 740 aa8.06□□□□□ -1.12
CHD6-206ENST00000470470 INSM2Q96T92 566 aaPredicted RBP8.06□□□□□ -1.12
CHD6-206ENST00000470470 RWDD1Q9H446 243 aaPredicted RBP8.06□□□□□ -1.12
CHD6-206ENST00000470470 POLMQ9NP87 494 aaPredicted RBP8.06□□□□□ -1.12
CHD6-206ENST00000470470 EID1Q9Y6B2 187 aa8.06□□□□□ -1.12
CHD6-206ENST00000470470 PTCH1Q13635 1447 aa8.06□□□□□ -1.12
CHD6-206ENST00000470470 RGPD1P0DJD0 1748 aa8.06□□□□□ -1.12
CHD6-206ENST00000470470 XRN1Q8IZH2 1706 aaKnown RBP8.06□□□□□ -1.12
CHD6-206ENST00000470470 PIK3R4Q99570 1358 aa8.06□□□□□ -1.12
CHD6-206ENST00000470470 USP54Q70EL1 1684 aa8.06□□□□□ -1.12
CHD6-206ENST00000470470 KIF16BQ96L93 1317 aa8.06□□□□□ -1.12
CHD6-206ENST00000470470 ADAMTS2O95450 1211 aa8.05□□□□□ -1.12
CHD6-206ENST00000470470 PRKAR2BP31323 418 aa8.05□□□□□ -1.12
CHD6-206ENST00000470470 RELBQ01201 579 aa8.05□□□□□ -1.12
CHD6-206ENST00000470470 MAP3K10Q02779 954 aa8.05□□□□□ -1.12
CHD6-206ENST00000470470 HDAC1Q13547 482 aaPredicted RBP8.05□□□□□ -1.12
CHD6-206ENST00000470470 NME9Q86XW9 330 aa8.05□□□□□ -1.12
CHD6-206ENST00000470470 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.05□□□□□ -1.12
CHD6-206ENST00000470470 THEMISQ8N1K5 641 aaPredicted RBP8.05□□□□□ -1.12
CHD6-206ENST00000470470 SSH1Q8WYL5 1049 aa8.05□□□□□ -1.12
CHD6-206ENST00000470470 ARHGAP45Q92619 1136 aa8.05□□□□□ -1.12
CHD6-206ENST00000470470 FRAT1Q92837 279 aaPredicted RBP8.05□□□□□ -1.12
CHD6-206ENST00000470470 DDX19BQ9UMR2 479 aa8.05□□□□□ -1.12
CHD6-206ENST00000470470 GPSM3Q9Y4H4 160 aa8.05□□□□□ -1.12
CHD6-206ENST00000470470 OVOS2A0A0J9YW53 1432 aa8.05□□□□□ -1.12
CHD6-206ENST00000470470 OVOS2Q6IE36 1432 aa8.05□□□□□ -1.12
CHD6-206ENST00000470470 PTPRUQ92729 1446 aa8.05□□□□□ -1.12
CHD6-206ENST00000470470 TTC21BQ7Z4L5 1316 aa8.05□□□□□ -1.12
CHD6-206ENST00000470470 TTC21AQ8NDW8 1320 aa8.05□□□□□ -1.12
CHD6-206ENST00000470470 GNAI1P63096 354 aa8.04□□□□□ -1.12
CHD6-206ENST00000470470 NBPF20Q3BBV1 942 aa8.04□□□□□ -1.12
CHD6-206ENST00000470470 ATF7IPQ6VMQ6 1270 aa8.04□□□□□ -1.12
CHD6-206ENST00000470470 AGBL1Q96MI9 1066 aa8.04□□□□□ -1.12
CHD6-206ENST00000470470 CHMP4BQ9H444 224 aaKnown RBP8.04□□□□□ -1.12
CHD6-206ENST00000470470 IFT57Q9NWB7 429 aa8.04□□□□□ -1.12
CHD6-206ENST00000470470 USP6P35125 1406 aa8.04□□□□□ -1.12
CHD6-206ENST00000470470 KRTAP9-6A0A140TA67 174 aa8.03□□□□□ -1.12
CHD6-206ENST00000470470 A6NJR5 290 aa8.03□□□□□ -1.12
CHD6-206ENST00000470470 TSR2Q969E8 191 aaKnown RBP8.03□□□□□ -1.12
CHD6-206ENST00000470470 HMX1Q9NP08 348 aaPredicted RBP8.03□□□□□ -1.12
CHD6-206ENST00000470470 SMC4Q9NTJ3 1288 aa8.03□□□□□ -1.12
CHD6-206ENST00000470470 ANKARQ7Z5J8 1434 aa8.03□□□□□ -1.12
CHD6-206ENST00000470470 FMN2Q9NZ56 1722 aa8.03□□□□□ -1.12
CHD6-206ENST00000470470 ACEP12821 1306 aa8.03□□□□□ -1.12
CHD6-206ENST00000470470 VAMP4O75379 141 aa8.03□□□□□ -1.12
CHD6-206ENST00000470470 ITGB2P05107 769 aa8.03□□□□□ -1.12
CHD6-206ENST00000470470 ADH1AP07327 375 aa8.03□□□□□ -1.12
CHD6-206ENST00000470470 TRIM27P14373 513 aa8.03□□□□□ -1.12
CHD6-206ENST00000470470 ABL2P42684 1182 aa8.03□□□□□ -1.12
CHD6-206ENST00000470470 PTK2Q05397 1052 aa8.03□□□□□ -1.12
CHD6-206ENST00000470470 LYPD4Q6UWN0 246 aa8.03□□□□□ -1.12
CHD6-206ENST00000470470 PROSER2Q86WR7 435 aaPredicted RBP8.03□□□□□ -1.12
CHD6-206ENST00000470470 DCAF5Q96JK2 942 aa8.03□□□□□ -1.12
CHD6-206ENST00000470470 PHACTR3Q96KR7 559 aa8.03□□□□□ -1.12
CHD6-206ENST00000470470 ENAMQ9NRM1 1142 aa8.03□□□□□ -1.12
CHD6-206ENST00000470470 ZBTB40Q9NUA8 1239 aa8.03□□□□□ -1.12
CHD6-206ENST00000470470 TNNQ9UQP3 1299 aa8.03□□□□□ -1.12
CHD6-206ENST00000470470 RGPD8O14715 1765 aaPredicted RBP8.02□□□□□ -1.12
CHD6-206ENST00000470470 KIF24Q5T7B8 1368 aa8.02□□□□□ -1.13
CHD6-206ENST00000470470 PPM1GO15355 546 aaPredicted RBP8.02□□□□□ -1.13
CHD6-206ENST00000470470 PROCP04070 461 aa8.02□□□□□ -1.13
CHD6-206ENST00000470470 NR6A1Q15406 480 aa8.02□□□□□ -1.13
CHD6-206ENST00000470470 FOXD4L5Q5VV16 416 aaPredicted RBP8.02□□□□□ -1.13
CHD6-206ENST00000470470 SKAP1Q86WV1 359 aa8.02□□□□□ -1.13
CHD6-206ENST00000470470 SMC5Q8IY18 1101 aa8.02□□□□□ -1.13
CHD6-206ENST00000470470 FTSJ3Q8IY81 847 aaKnown RBP8.02□□□□□ -1.13
CHD6-206ENST00000470470 GMCL1Q96IK5 515 aa8.02□□□□□ -1.13
CHD6-206ENST00000470470 PEAK1Q9H792 1746 aa8.02□□□□□ -1.13
CHD6-206ENST00000470470 GDPD2Q9HCC8 539 aa8.02□□□□□ -1.13
CHD6-206ENST00000470470 USP35Q9P2H5 1018 aa8.02□□□□□ -1.13
CHD6-206ENST00000470470 NOB1Q9ULX3 412 aaKnown RBP8.02□□□□□ -1.13
CHD6-206ENST00000470470 AMOTL2Q9Y2J4 779 aa8.02□□□□□ -1.13
CHD6-206ENST00000470470 SETD1BQ9UPS6 1966 aaKnown RBP8.01□□□□□ -1.13
CHD6-206ENST00000470470 CHD2O14647 1828 aaKnown RBP8.01□□□□□ -1.13
CHD6-206ENST00000470470 CELA2BP08218 269 aaPredicted RBP8.01□□□□□ -1.13
CHD6-206ENST00000470470 FBLN1P23142 703 aa8.01□□□□□ -1.13
CHD6-206ENST00000470470 RGS3P49796 1198 aa8.01□□□□□ -1.13
CHD6-206ENST00000470470 Q8N3U1 123 aa8.01□□□□□ -1.13
CHD6-206ENST00000470470 POM121Q96HA1 1249 aa8.01□□□□□ -1.13
CHD6-206ENST00000470470 GJD4Q96KN9 370 aaPredicted RBP8.01□□□□□ -1.13
CHD6-206ENST00000470470 TBC1D2BQ9UPU7 963 aa8.01□□□□□ -1.13
CHD6-206ENST00000470470 CACNA1FO60840 1977 aa8□□□□□ -1.13
CHD6-206ENST00000470470 ZNF142P52746 1687 aaPredicted RBP8□□□□□ -1.13
CHD6-206ENST00000470470 PHF20L1A8MW92 1017 aa8□□□□□ -1.13
CHD6-206ENST00000470470 K7ELQ4 463 aaPredicted RBP8□□□□□ -1.13
CHD6-206ENST00000470470 HMOX1P09601 288 aa8□□□□□ -1.13
CHD6-206ENST00000470470 CEBPAP49715 358 aaPredicted RBP8□□□□□ -1.13
CHD6-206ENST00000470470 EIF4A2Q14240 407 aaKnown RBP8□□□□□ -1.13
CHD6-206ENST00000470470 GAS6Q14393 721 aa8□□□□□ -1.13
CHD6-206ENST00000470470 LYSMD3Q7Z3D4 306 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 141.2 ms