RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 METTL24Q5JXM2 366 aa18.53■□□□□ 0.56
COL4A5-203ENST00000470339 DDX46Q7L014 1031 aaKnown RBP18.53■□□□□ 0.56
COL4A5-203ENST00000470339 ANKRD31Q8N7Z5 1873 aa18.53■□□□□ 0.56
COL4A5-203ENST00000470339 PI4K2BQ8TCG2 481 aa18.53■□□□□ 0.56
COL4A5-203ENST00000470339 BSDC1Q9NW68 430 aaPredicted RBP18.53■□□□□ 0.56
COL4A5-203ENST00000470339 ZNF609O15014 1411 aa18.52■□□□□ 0.56
COL4A5-203ENST00000470339 PDE8BO95263 885 aa18.52■□□□□ 0.56
COL4A5-203ENST00000470339 RPS8P62241 208 aaKnown RBP18.52■□□□□ 0.56
COL4A5-203ENST00000470339 VGLL2Q8N8G2 317 aa18.52■□□□□ 0.56
COL4A5-203ENST00000470339 BRIP1Q9BX63 1249 aa18.52■□□□□ 0.56
COL4A5-203ENST00000470339 CCDC8Q9H0W5 538 aaPredicted RBP18.52■□□□□ 0.56
COL4A5-203ENST00000470339 A0A1B0GUL6 1792 aa18.51■□□□□ 0.55
COL4A5-203ENST00000470339 ARAP2Q8WZ64 1704 aa18.5■□□□□ 0.55
COL4A5-203ENST00000470339 EIF5BO60841 1220 aaKnown RBP18.5■□□□□ 0.55
COL4A5-203ENST00000470339 HOXA10P31260 410 aaPredicted RBP18.5■□□□□ 0.55
COL4A5-203ENST00000470339 CCDC24Q8N4L8 307 aa18.5■□□□□ 0.55
COL4A5-203ENST00000470339 DBNLQ9UJU6 430 aaKnown RBP18.5■□□□□ 0.55
COL4A5-203ENST00000470339 A0A1B0GUL7 405 aa18.49■□□□□ 0.55
COL4A5-203ENST00000470339 ATP5JP18859 108 aa18.49■□□□□ 0.55
COL4A5-203ENST00000470339 SDSP20132 328 aa18.49■□□□□ 0.55
COL4A5-203ENST00000470339 TIMM10P62072 90 aa18.49■□□□□ 0.55
COL4A5-203ENST00000470339 RPGRQ92834 1020 aaKnown RBP18.49■□□□□ 0.55
COL4A5-203ENST00000470339 RBM17Q96I25 401 aaKnown RBP18.49■□□□□ 0.55
COL4A5-203ENST00000470339 TSHZ2Q9NRE2 1034 aa18.49■□□□□ 0.55
COL4A5-203ENST00000470339 PDE6BP35913 854 aa18.48■□□□□ 0.55
COL4A5-203ENST00000470339 GRAPQ13588 217 aa18.48■□□□□ 0.55
COL4A5-203ENST00000470339 PUM3Q15397 648 aaKnown RBP18.48■□□□□ 0.55
COL4A5-203ENST00000470339 ATP2B3Q16720 1220 aa18.48■□□□□ 0.55
COL4A5-203ENST00000470339 GRAPLQ8TC17 118 aaPredicted RBP18.48■□□□□ 0.55
COL4A5-203ENST00000470339 CELF1Q92879 486 aaKnown RBP18.48■□□□□ 0.55
COL4A5-203ENST00000470339 NEUROD6Q96NK8 337 aa18.48■□□□□ 0.55
COL4A5-203ENST00000470339 CRAMP1Q96RY5 1269 aa18.48■□□□□ 0.55
COL4A5-203ENST00000470339 DBNDD2Q9BQY9 259 aa18.48■□□□□ 0.55
COL4A5-203ENST00000470339 TLR7Q9NYK1 1049 aaKnown RBP18.48■□□□□ 0.55
COL4A5-203ENST00000470339 COL4A1P02462 1669 aa18.47■□□□□ 0.55
COL4A5-203ENST00000470339 CDC45O75419 566 aa18.47■□□□□ 0.55
COL4A5-203ENST00000470339 FGFR2P21802 821 aa18.47■□□□□ 0.55
COL4A5-203ENST00000470339 TSHZ3Q63HK5 1081 aa18.47■□□□□ 0.55
COL4A5-203ENST00000470339 MSL1Q68DK7 614 aa18.47■□□□□ 0.55
COL4A5-203ENST00000470339 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.47■□□□□ 0.55
COL4A5-203ENST00000470339 LPIN2Q92539 896 aa18.47■□□□□ 0.55
COL4A5-203ENST00000470339 BBOX1O75936 387 aa18.46■□□□□ 0.55
COL4A5-203ENST00000470339 CHRNDQ07001 517 aa18.46■□□□□ 0.55
COL4A5-203ENST00000470339 TMC4Q7Z404 712 aa18.46■□□□□ 0.55
COL4A5-203ENST00000470339 XAGE2Q96GT9 111 aa18.46■□□□□ 0.55
COL4A5-203ENST00000470339 ANKRD2Q9GZV1 360 aa18.46■□□□□ 0.55
COL4A5-203ENST00000470339 MINPP1Q9UNW1 487 aa18.46■□□□□ 0.55
COL4A5-203ENST00000470339 SRCAPQ6ZRS2 3230 aa18.45■□□□□ 0.54
COL4A5-203ENST00000470339 CCDC158Q5M9N0 1113 aa18.45■□□□□ 0.54
COL4A5-203ENST00000470339 TICAM2Q86XR7 235 aa18.45■□□□□ 0.54
COL4A5-203ENST00000470339 CNTROBQ8N137 903 aa18.45■□□□□ 0.54
COL4A5-203ENST00000470339 ZNF512BQ96KM6 892 aaPredicted RBP18.45■□□□□ 0.54
COL4A5-203ENST00000470339 TRIM6-TRIM34B2RNG4 842 aa18.44■□□□□ 0.54
COL4A5-203ENST00000470339 SLC5A1P13866 664 aa18.44■□□□□ 0.54
COL4A5-203ENST00000470339 NPR1P16066 1061 aa18.44■□□□□ 0.54
COL4A5-203ENST00000470339 UBE4AQ14139 1066 aa18.44■□□□□ 0.54
COL4A5-203ENST00000470339 GORABQ5T7V8 394 aa18.44■□□□□ 0.54
COL4A5-203ENST00000470339 CASC1Q6TDU7 716 aa18.44■□□□□ 0.54
COL4A5-203ENST00000470339 EVI5LQ96CN4 794 aa18.44■□□□□ 0.54
COL4A5-203ENST00000470339 IFIT1P09914 478 aaKnown RBP18.43■□□□□ 0.54
COL4A5-203ENST00000470339 SRGNP10124 158 aa18.43■□□□□ 0.54
COL4A5-203ENST00000470339 TBC1D9Q6ZT07 1266 aa18.43■□□□□ 0.54
COL4A5-203ENST00000470339 HELBQ8NG08 1087 aaPredicted RBP18.43■□□□□ 0.54
COL4A5-203ENST00000470339 HAUS7Q99871 368 aa18.43■□□□□ 0.54
COL4A5-203ENST00000470339 ALDH1B1P30837 517 aa18.42■□□□□ 0.54
COL4A5-203ENST00000470339 RILPL2Q969X0 211 aa18.42■□□□□ 0.54
COL4A5-203ENST00000470339 PDGFDQ9GZP0 370 aaPredicted RBP18.42■□□□□ 0.54
COL4A5-203ENST00000470339 BOLA2Q9H3K6 86 aa18.42■□□□□ 0.54
COL4A5-203ENST00000470339 AKAP11Q9UKA4 1901 aa18.42■□□□□ 0.54
COL4A5-203ENST00000470339 COL11A2P13942 1736 aaPredicted RBP18.41■□□□□ 0.54
COL4A5-203ENST00000470339 TAF5LO75529 589 aa18.41■□□□□ 0.54
COL4A5-203ENST00000470339 UQCRFS1P1P0C7P4 283 aa18.41■□□□□ 0.54
COL4A5-203ENST00000470339 ADORA1P30542 326 aa18.41■□□□□ 0.54
COL4A5-203ENST00000470339 MASTLQ96GX5 879 aa18.41■□□□□ 0.54
COL4A5-203ENST00000470339 KIF13BQ9NQT8 1826 aa18.41■□□□□ 0.54
COL4A5-203ENST00000470339 LRRC37AA6NMS7 1700 aa18.4■□□□□ 0.54
COL4A5-203ENST00000470339 TTC39AQ5SRH9 613 aa18.4■□□□□ 0.54
COL4A5-203ENST00000470339 STYK1Q6J9G0 422 aa18.4■□□□□ 0.54
COL4A5-203ENST00000470339 LEMD3Q9Y2U8 911 aa18.4■□□□□ 0.54
COL4A5-203ENST00000470339 H0YIN7 160 aa18.39■□□□□ 0.53
COL4A5-203ENST00000470339 HIP1O00291 1037 aa18.39■□□□□ 0.53
COL4A5-203ENST00000470339 ZBTB22O15209 634 aa18.39■□□□□ 0.53
COL4A5-203ENST00000470339 SP8Q8IXZ3 490 aa18.39■□□□□ 0.53
COL4A5-203ENST00000470339 MTFR1LQ9H019 292 aa18.39■□□□□ 0.53
COL4A5-203ENST00000470339 DLEC1Q9Y238 1755 aa18.38■□□□□ 0.53
COL4A5-203ENST00000470339 CHMLP26374 656 aa18.38■□□□□ 0.53
COL4A5-203ENST00000470339 ARID4AP29374 1257 aaPredicted RBP18.38■□□□□ 0.53
COL4A5-203ENST00000470339 CCDC102BQ68D86 513 aa18.38■□□□□ 0.53
COL4A5-203ENST00000470339 UPF2Q9HAU5 1272 aaKnown RBP18.38■□□□□ 0.53
COL4A5-203ENST00000470339 RFX7Q2KHR2 1363 aa18.38■□□□□ 0.53
COL4A5-203ENST00000470339 C10orf71Q711Q0 1435 aa18.38■□□□□ 0.53
COL4A5-203ENST00000470339 SEC24BO95487 1268 aa18.37■□□□□ 0.53
COL4A5-203ENST00000470339 MAP4K4O95819 1239 aaPredicted RBP18.37■□□□□ 0.53
COL4A5-203ENST00000470339 C2CD5Q86YS7 1000 aa18.37■□□□□ 0.53
COL4A5-203ENST00000470339 PODXL2Q9NZ53 605 aa18.37■□□□□ 0.53
COL4A5-203ENST00000470339 RBM19Q9Y4C8 960 aaKnown RBP18.37■□□□□ 0.53
COL4A5-203ENST00000470339 XDHP47989 1333 aa18.37■□□□□ 0.53
COL4A5-203ENST00000470339 ZNF804BA4D1E1 1349 aa18.36■□□□□ 0.53
COL4A5-203ENST00000470339 MYH7P12883 1935 aa18.36■□□□□ 0.53
COL4A5-203ENST00000470339 KCNJ4P48050 445 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms