RNA–Protein interactions for RNA: ENST00000470252.1

SFXN3-205, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-205ENST00000470252 STRCQ7RTU9 1775 aa15.47■□□□□ 0.07
SFXN3-205ENST00000470252 OVOS2A0A0G2JMS6 1433 aa15.47■□□□□ 0.07
SFXN3-205ENST00000470252 CHGBP05060 677 aa15.47■□□□□ 0.07
SFXN3-205ENST00000470252 ATP5JP18859 108 aa15.47■□□□□ 0.07
SFXN3-205ENST00000470252 SCRN1Q12765 414 aa15.47■□□□□ 0.07
SFXN3-205ENST00000470252 LRRC8AQ8IWT6 810 aa15.47■□□□□ 0.07
SFXN3-205ENST00000470252 CCAR1Q8IX12 1150 aaKnown RBP15.47■□□□□ 0.07
SFXN3-205ENST00000470252 SEC62Q99442 399 aaKnown RBP15.47■□□□□ 0.07
SFXN3-205ENST00000470252 DNAJC2Q99543 621 aaKnown RBP15.47■□□□□ 0.07
SFXN3-205ENST00000470252 DBNLQ9UJU6 430 aaKnown RBP15.47■□□□□ 0.07
SFXN3-205ENST00000470252 U3KPZ7 1027 aaPredicted RBP15.47■□□□□ 0.07
SFXN3-205ENST00000470252 ZNF609O15014 1411 aa15.47■□□□□ 0.07
SFXN3-205ENST00000470252 NEURL1BA8MQ27 555 aa15.46■□□□□ 0.07
SFXN3-205ENST00000470252 CYP21A2P08686 494 aa15.46■□□□□ 0.07
SFXN3-205ENST00000470252 MYL6BP14649 208 aa15.46■□□□□ 0.07
SFXN3-205ENST00000470252 PSME1Q06323 249 aa15.46■□□□□ 0.07
SFXN3-205ENST00000470252 NAA30Q147X3 362 aaPredicted RBP15.46■□□□□ 0.07
SFXN3-205ENST00000470252 PDIA6Q15084 440 aa15.46■□□□□ 0.07
SFXN3-205ENST00000470252 STX1AQ16623 288 aa15.46■□□□□ 0.07
SFXN3-205ENST00000470252 CEP135Q66GS9 1140 aa15.46■□□□□ 0.07
SFXN3-205ENST00000470252 SARM1Q6SZW1 724 aa15.46■□□□□ 0.07
SFXN3-205ENST00000470252 ARID5BQ14865 1188 aa15.46■□□□□ 0.06
SFXN3-205ENST00000470252 FTOQ9C0B1 505 aaKnown RBP eCLIP15.46■□□□□ 0.06
SFXN3-205ENST00000470252 PHRF1Q9P1Y6 1649 aaKnown RBP15.46■□□□□ 0.06
SFXN3-205ENST00000470252 CTAGE5O15320 804 aa15.45■□□□□ 0.06
SFXN3-205ENST00000470252 GCKRQ14397 625 aa15.45■□□□□ 0.06
SFXN3-205ENST00000470252 TNNI3KQ59H18 835 aa15.45■□□□□ 0.06
SFXN3-205ENST00000470252 MYD88Q99836 296 aa15.45■□□□□ 0.06
SFXN3-205ENST00000470252 BCL11BQ9C0K0 894 aaPredicted RBP15.45■□□□□ 0.06
SFXN3-205ENST00000470252 FPGT-TNNI3KV9GXZ4 949 aa15.45■□□□□ 0.06
SFXN3-205ENST00000470252 C5P01031 1676 aa15.45■□□□□ 0.06
SFXN3-205ENST00000470252 BECN2A8MW95 431 aa15.45■□□□□ 0.06
SFXN3-205ENST00000470252 ADD1P35611 737 aaKnown RBP15.45■□□□□ 0.06
SFXN3-205ENST00000470252 TFCP2Q12800 502 aa15.45■□□□□ 0.06
SFXN3-205ENST00000470252 SMARCC2Q8TAQ2 1214 aa15.45■□□□□ 0.06
SFXN3-205ENST00000470252 MRFAP1L1Q96HT8 127 aa15.45■□□□□ 0.06
SFXN3-205ENST00000470252 GOLPH3LQ9H4A5 285 aa15.45■□□□□ 0.06
SFXN3-205ENST00000470252 OGFRQ9NZT2 677 aa15.45■□□□□ 0.06
SFXN3-205ENST00000470252 CGNQ9P2M7 1197 aaKnown RBP15.45■□□□□ 0.06
SFXN3-205ENST00000470252 AFDNP55196 1824 aaKnown RBP15.44■□□□□ 0.06
SFXN3-205ENST00000470252 USP27XA6NNY8 438 aa15.44■□□□□ 0.06
SFXN3-205ENST00000470252 MCMDC2Q4G0Z9 681 aa15.44■□□□□ 0.06
SFXN3-205ENST00000470252 CCDC73Q6ZRK6 1079 aa15.44■□□□□ 0.06
SFXN3-205ENST00000470252 CTNNA3Q9UI47 895 aa15.44■□□□□ 0.06
SFXN3-205ENST00000470252 A0A087WWV3 80 aa15.44■□□□□ 0.06
SFXN3-205ENST00000470252 NEMFO60524 1076 aa15.44■□□□□ 0.06
SFXN3-205ENST00000470252 RBM33Q96EV2 1170 aaKnown RBP15.44■□□□□ 0.06
SFXN3-205ENST00000470252 LLPHQ9BRT6 129 aaKnown RBP15.44■□□□□ 0.06
SFXN3-205ENST00000470252 RCOR1Q9UKL0 485 aa15.44■□□□□ 0.06
SFXN3-205ENST00000470252 PFKFB2O60825 505 aa15.43■□□□□ 0.06
SFXN3-205ENST00000470252 SKILP12757 684 aa15.43■□□□□ 0.06
SFXN3-205ENST00000470252 NSUN7Q8NE18 718 aaKnown RBP15.43■□□□□ 0.06
SFXN3-205ENST00000470252 XAGE3Q8WTP9 111 aa15.43■□□□□ 0.06
SFXN3-205ENST00000470252 COPRSQ9NQ92 184 aa15.43■□□□□ 0.06
SFXN3-205ENST00000470252 KINO60870 393 aaKnown RBP15.43■□□□□ 0.06
SFXN3-205ENST00000470252 RBM6P78332 1123 aaKnown RBP15.43■□□□□ 0.06
SFXN3-205ENST00000470252 SLC39A6Q13433 755 aa15.43■□□□□ 0.06
SFXN3-205ENST00000470252 ESCO1Q5FWF5 840 aa15.43■□□□□ 0.06
SFXN3-205ENST00000470252 NAA16Q6N069 864 aaPredicted RBP15.43■□□□□ 0.06
SFXN3-205ENST00000470252 STOX1Q6ZVD7 989 aa15.43■□□□□ 0.06
SFXN3-205ENST00000470252 DDX46Q7L014 1031 aaKnown RBP15.43■□□□□ 0.06
SFXN3-205ENST00000470252 FILIP1Q7Z7B0 1213 aa15.43■□□□□ 0.06
SFXN3-205ENST00000470252 ANKLE2Q86XL3 938 aa15.43■□□□□ 0.06
SFXN3-205ENST00000470252 ANKRD24Q8TF21 1146 aa15.43■□□□□ 0.06
SFXN3-205ENST00000470252 USP28Q96RU2 1077 aa15.43■□□□□ 0.06
SFXN3-205ENST00000470252 USP16Q9Y5T5 823 aa15.43■□□□□ 0.06
SFXN3-205ENST00000470252 PTPDC1A2A3K4 754 aa15.42■□□□□ 0.06
SFXN3-205ENST00000470252 IGSF3O75054 1194 aa15.42■□□□□ 0.06
SFXN3-205ENST00000470252 KIF20AO95235 890 aa15.42■□□□□ 0.06
SFXN3-205ENST00000470252 PDE4CQ08493 712 aa15.42■□□□□ 0.06
SFXN3-205ENST00000470252 APOBRQ0VD83 1088 aa15.42■□□□□ 0.06
SFXN3-205ENST00000470252 SNW1Q13573 536 aaKnown RBP15.42■□□□□ 0.06
SFXN3-205ENST00000470252 PTPN14Q15678 1187 aa15.42■□□□□ 0.06
SFXN3-205ENST00000470252 COPS6Q7L5N1 327 aa15.42■□□□□ 0.06
SFXN3-205ENST00000470252 DBNDD2Q9BQY9 259 aa15.42■□□□□ 0.06
SFXN3-205ENST00000470252 METTL22Q9BUU2 404 aaPredicted RBP15.42■□□□□ 0.06
SFXN3-205ENST00000470252 CCDC9Q9Y3X0 531 aaKnown RBP15.42■□□□□ 0.06
SFXN3-205ENST00000470252 RFX7Q2KHR2 1363 aa15.42■□□□□ 0.06
SFXN3-205ENST00000470252 CCDC69A6NI79 296 aa15.42■□□□□ 0.06
SFXN3-205ENST00000470252 CCT2P78371 535 aaKnown RBP15.42■□□□□ 0.06
SFXN3-205ENST00000470252 PTPN12Q05209 780 aaKnown RBP15.42■□□□□ 0.06
SFXN3-205ENST00000470252 DHX40Q8IX18 779 aaKnown RBP15.42■□□□□ 0.06
SFXN3-205ENST00000470252 ANO10Q9NW15 660 aa15.42■□□□□ 0.06
SFXN3-205ENST00000470252 NAP1L2Q9ULW6 460 aaPredicted RBP15.42■□□□□ 0.06
SFXN3-205ENST00000470252 CTDNEP1O95476 244 aa15.41■□□□□ 0.06
SFXN3-205ENST00000470252 RFX5P48382 616 aaPredicted RBP15.41■□□□□ 0.06
SFXN3-205ENST00000470252 DHX32Q7L7V1 743 aaKnown RBP15.41■□□□□ 0.06
SFXN3-205ENST00000470252 FBXW7Q969H0 707 aa15.41■□□□□ 0.06
SFXN3-205ENST00000470252 HAUS7Q99871 368 aa15.41■□□□□ 0.06
SFXN3-205ENST00000470252 PPFIA3O75145 1194 aa15.41■□□□□ 0.06
SFXN3-205ENST00000470252 HMGB1P09429 215 aaKnown RBP15.41■□□□□ 0.06
SFXN3-205ENST00000470252 FAM160A1Q05DH4 1040 aa15.41■□□□□ 0.06
SFXN3-205ENST00000470252 FSIP1Q8NA03 581 aa15.41■□□□□ 0.06
SFXN3-205ENST00000470252 ZNF396Q96N95 335 aaPredicted RBP15.41■□□□□ 0.06
SFXN3-205ENST00000470252 TRMT1Q9NXH9 659 aaKnown RBP15.41■□□□□ 0.06
SFXN3-205ENST00000470252 GCP02774 474 aa15.4■□□□□ 0.06
SFXN3-205ENST00000470252 ME1P48163 572 aa15.4■□□□□ 0.06
SFXN3-205ENST00000470252 GUCY1B3Q02153 619 aa15.4■□□□□ 0.06
SFXN3-205ENST00000470252 ZNF790Q6PG37 636 aa15.4■□□□□ 0.06
SFXN3-205ENST00000470252 NYAP1Q6ZVC0 841 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms