RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 LAMB4A4D0S4 1761 aa11.72□□□□□ -0.53
SYNGAP1-205ENST00000470232 RIMBP2O15034 1052 aa11.72□□□□□ -0.53
SYNGAP1-205ENST00000470232 TBC1D8O95759 1140 aa11.72□□□□□ -0.53
SYNGAP1-205ENST00000470232 INTS3Q68E01 1043 aaKnown RBP11.72□□□□□ -0.53
SYNGAP1-205ENST00000470232 RASAL3Q86YV0 1011 aa11.72□□□□□ -0.53
SYNGAP1-205ENST00000470232 DBNDD1Q9H9R9 158 aa11.72□□□□□ -0.53
SYNGAP1-205ENST00000470232 TRMT112Q9UI30 125 aaKnown RBP11.72□□□□□ -0.53
SYNGAP1-205ENST00000470232 GPR25O00155 361 aa11.71□□□□□ -0.53
SYNGAP1-205ENST00000470232 ECE2O60344 883 aa11.71□□□□□ -0.53
SYNGAP1-205ENST00000470232 HCLS1P14317 486 aaPredicted RBP11.71□□□□□ -0.53
SYNGAP1-205ENST00000470232 NECTIN2Q92692 538 aa11.71□□□□□ -0.53
SYNGAP1-205ENST00000470232 ZC3H12CQ9C0D7 883 aaKnown RBP11.71□□□□□ -0.53
SYNGAP1-205ENST00000470232 GGA3Q9NZ52 723 aa11.71□□□□□ -0.53
SYNGAP1-205ENST00000470232 SH3TC1Q8TE82 1336 aa11.7□□□□□ -0.54
SYNGAP1-205ENST00000470232 FKTNO75072 461 aa11.7□□□□□ -0.54
SYNGAP1-205ENST00000470232 EGFRP00533 1210 aa11.7□□□□□ -0.54
SYNGAP1-205ENST00000470232 VIL1P09327 827 aaKnown RBP11.7□□□□□ -0.54
SYNGAP1-205ENST00000470232 TM4SF4P48230 202 aa11.7□□□□□ -0.54
SYNGAP1-205ENST00000470232 SREBF2Q12772 1141 aa11.7□□□□□ -0.54
SYNGAP1-205ENST00000470232 ANKRD36CQ5JPF3 1778 aa11.69□□□□□ -0.54
SYNGAP1-205ENST00000470232 NF2P35240 595 aa11.69□□□□□ -0.54
SYNGAP1-205ENST00000470232 SCARF1Q14162 830 aa11.69□□□□□ -0.54
SYNGAP1-205ENST00000470232 DOK7Q18PE1 504 aa11.69□□□□□ -0.54
SYNGAP1-205ENST00000470232 NLRP10Q86W26 655 aa11.69□□□□□ -0.54
SYNGAP1-205ENST00000470232 AGBL3Q8NEM8 1001 aa11.69□□□□□ -0.54
SYNGAP1-205ENST00000470232 PITPNM2Q9BZ72 1349 aa11.68□□□□□ -0.54
SYNGAP1-205ENST00000470232 ALDH1A1P00352 501 aa11.68□□□□□ -0.54
SYNGAP1-205ENST00000470232 EIF2S2P20042 333 aaKnown RBP11.68□□□□□ -0.54
SYNGAP1-205ENST00000470232 TCIRG1Q13488 830 aa11.68□□□□□ -0.54
SYNGAP1-205ENST00000470232 TTLL12Q14166 644 aaPredicted RBP11.68□□□□□ -0.54
SYNGAP1-205ENST00000470232 ANGEL2Q5VTE6 544 aaKnown RBP11.68□□□□□ -0.54
SYNGAP1-205ENST00000470232 POLLQ9UGP5 575 aa11.68□□□□□ -0.54
SYNGAP1-205ENST00000470232 UBE2Q2LH0YL09 131 aa11.67□□□□□ -0.54
SYNGAP1-205ENST00000470232 THUMPD2Q9BTF0 503 aaKnown RBP11.67□□□□□ -0.54
SYNGAP1-205ENST00000470232 CFHR5Q9BXR6 569 aa11.67□□□□□ -0.54
SYNGAP1-205ENST00000470232 PNNQ9H307 717 aaKnown RBP11.67□□□□□ -0.54
SYNGAP1-205ENST00000470232 KCNQ5Q9NR82 932 aa11.67□□□□□ -0.54
SYNGAP1-205ENST00000470232 INHBEP58166 350 aa11.66□□□□□ -0.54
SYNGAP1-205ENST00000470232 ZNF280AP59817 542 aaPredicted RBP11.66□□□□□ -0.54
SYNGAP1-205ENST00000470232 GPSM2P81274 684 aa11.66□□□□□ -0.54
SYNGAP1-205ENST00000470232 AIMP1Q12904 312 aaKnown RBP11.66□□□□□ -0.54
SYNGAP1-205ENST00000470232 SF3B3Q15393 1217 aaKnown RBP11.66□□□□□ -0.54
SYNGAP1-205ENST00000470232 COPS6Q7L5N1 327 aa11.66□□□□□ -0.54
SYNGAP1-205ENST00000470232 TBC1D16Q8TBP0 767 aa11.66□□□□□ -0.54
SYNGAP1-205ENST00000470232 PAPPA2Q9BXP8 1791 aa11.66□□□□□ -0.54
SYNGAP1-205ENST00000470232 RTL9Q8NET4 1388 aa11.66□□□□□ -0.54
SYNGAP1-205ENST00000470232 USP17L8P0C7I0 530 aa11.65□□□□□ -0.54
SYNGAP1-205ENST00000470232 HSP90B1P14625 803 aaKnown RBP11.65□□□□□ -0.54
SYNGAP1-205ENST00000470232 RPS8P62241 208 aaKnown RBP11.65□□□□□ -0.54
SYNGAP1-205ENST00000470232 PDIA6Q15084 440 aa11.65□□□□□ -0.54
SYNGAP1-205ENST00000470232 RSBN1LQ6PCB5 846 aaPredicted RBP11.65□□□□□ -0.54
SYNGAP1-205ENST00000470232 ARMC9Q7Z3E5 817 aa11.65□□□□□ -0.54
SYNGAP1-205ENST00000470232 MYOZ2Q9NPC6 264 aa11.65□□□□□ -0.54
SYNGAP1-205ENST00000470232 TSPYL4Q9UJ04 414 aa11.65□□□□□ -0.54
SYNGAP1-205ENST00000470232 LAMB2P55268 1798 aa11.64□□□□□ -0.55
SYNGAP1-205ENST00000470232 KDM3BQ7LBC6 1761 aa11.64□□□□□ -0.55
SYNGAP1-205ENST00000470232 ASTN2O75129 1339 aaPredicted RBP11.64□□□□□ -0.55
SYNGAP1-205ENST00000470232 DDX60Q8IY21 1712 aaKnown RBP11.64□□□□□ -0.55
SYNGAP1-205ENST00000470232 MKI67P46013 3256 aaKnown RBP11.64□□□□□ -0.55
SYNGAP1-205ENST00000470232 FXR1P51114 621 aaKnown RBP eCLIP11.64□□□□□ -0.55
SYNGAP1-205ENST00000470232 LRP10Q7Z4F1 713 aa11.64□□□□□ -0.55
SYNGAP1-205ENST00000470232 CELF1Q92879 486 aaKnown RBP11.64□□□□□ -0.55
SYNGAP1-205ENST00000470232 PODXL2Q9NZ53 605 aa11.64□□□□□ -0.55
SYNGAP1-205ENST00000470232 ANKIB1Q9P2G1 1089 aa11.64□□□□□ -0.55
SYNGAP1-205ENST00000470232 GGA1Q9UJY5 639 aa11.64□□□□□ -0.55
SYNGAP1-205ENST00000470232 TRIM17Q9Y577 477 aa11.64□□□□□ -0.55
SYNGAP1-205ENST00000470232 DUOX1Q9NRD9 1551 aa11.63□□□□□ -0.55
SYNGAP1-205ENST00000470232 MMP14P50281 582 aa11.63□□□□□ -0.55
SYNGAP1-205ENST00000470232 NFE2L2Q16236 605 aa11.63□□□□□ -0.55
SYNGAP1-205ENST00000470232 MOB2Q70IA6 237 aa11.63□□□□□ -0.55
SYNGAP1-205ENST00000470232 XAGE3Q8WTP9 111 aa11.63□□□□□ -0.55
SYNGAP1-205ENST00000470232 TMEM106CQ9BVX2 250 aa11.63□□□□□ -0.55
SYNGAP1-205ENST00000470232 BABAM1Q9NWV8 329 aa11.63□□□□□ -0.55
SYNGAP1-205ENST00000470232 TAF1P21675 1872 aa11.62□□□□□ -0.55
SYNGAP1-205ENST00000470232 USP17L3A6NCW0 530 aa11.62□□□□□ -0.55
SYNGAP1-205ENST00000470232 USP17L4A6NCW7 530 aa11.62□□□□□ -0.55
SYNGAP1-205ENST00000470232 UFL1O94874 794 aa11.62□□□□□ -0.55
SYNGAP1-205ENST00000470232 PPP2R1AP30153 589 aa11.62□□□□□ -0.55
SYNGAP1-205ENST00000470232 MKRN3Q13064 507 aaKnown RBP11.62□□□□□ -0.55
SYNGAP1-205ENST00000470232 USP17L1Q7RTZ2 530 aa11.62□□□□□ -0.55
SYNGAP1-205ENST00000470232 PODNQ7Z5L7 613 aa11.62□□□□□ -0.55
SYNGAP1-205ENST00000470232 OGFOD1Q8N543 542 aa11.62□□□□□ -0.55
SYNGAP1-205ENST00000470232 FAM89AQ96GI7 184 aa11.62□□□□□ -0.55
SYNGAP1-205ENST00000470232 ERO1AQ96HE7 468 aa11.62□□□□□ -0.55
SYNGAP1-205ENST00000470232 LRRC37AA6NMS7 1700 aa11.62□□□□□ -0.55
SYNGAP1-205ENST00000470232 ZNF609O15014 1411 aa11.61□□□□□ -0.55
SYNGAP1-205ENST00000470232 POTEFA5A3E0 1075 aa11.61□□□□□ -0.55
SYNGAP1-205ENST00000470232 MANSC4A6NHS7 340 aaPredicted RBP11.61□□□□□ -0.55
SYNGAP1-205ENST00000470232 ANXA1P04083 346 aa11.61□□□□□ -0.55
SYNGAP1-205ENST00000470232 ARHGEF6Q15052 776 aa11.61□□□□□ -0.55
SYNGAP1-205ENST00000470232 PROSER3Q2NL68 480 aa11.61□□□□□ -0.55
SYNGAP1-205ENST00000470232 OTUD7BQ6GQQ9 843 aa11.61□□□□□ -0.55
SYNGAP1-205ENST00000470232 OTOP1Q7RTM1 612 aa11.61□□□□□ -0.55
SYNGAP1-205ENST00000470232 MAPK8IP3Q9UPT6 1336 aa11.6□□□□□ -0.55
SYNGAP1-205ENST00000470232 PTPN12Q05209 780 aaKnown RBP11.6□□□□□ -0.55
SYNGAP1-205ENST00000470232 PRAMEF18Q5VWM3 479 aa11.6□□□□□ -0.55
SYNGAP1-205ENST00000470232 ANKRD13DQ6ZTN6 518 aa11.6□□□□□ -0.55
SYNGAP1-205ENST00000470232 NBPF11Q86T75 865 aa11.6□□□□□ -0.55
SYNGAP1-205ENST00000470232 PLBD2Q8NHP8 589 aa11.6□□□□□ -0.55
SYNGAP1-205ENST00000470232 SLC10A4Q96EP9 437 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms