RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 IRS1P35568 1242 aa7.28□□□□□ -1.24
BRCA2-202ENST00000470094 SIK1P57059 783 aa7.28□□□□□ -1.24
BRCA2-202ENST00000470094 PDE3BQ13370 1112 aa7.28□□□□□ -1.24
BRCA2-202ENST00000470094 LINC00114Q6XXX2 140 aa7.28□□□□□ -1.24
BRCA2-202ENST00000470094 C20orf204Q6ZNR8 217 aa7.28□□□□□ -1.24
BRCA2-202ENST00000470094 NUDT8Q8WV74 236 aa7.28□□□□□ -1.24
BRCA2-202ENST00000470094 SPACA7Q96KW9 195 aa7.28□□□□□ -1.24
BRCA2-202ENST00000470094 FRRS1LQ9P0K9 344 aa7.28□□□□□ -1.24
BRCA2-202ENST00000470094 J3QW42 95 aa7.27□□□□□ -1.25
BRCA2-202ENST00000470094 PERM1Q5SV97 790 aa7.27□□□□□ -1.25
BRCA2-202ENST00000470094 C8orf86Q6ZUL3 223 aa7.27□□□□□ -1.25
BRCA2-202ENST00000470094 TMC1Q8TDI8 760 aa7.27□□□□□ -1.25
BRCA2-202ENST00000470094 SNX29Q8TEQ0 813 aa7.27□□□□□ -1.25
BRCA2-202ENST00000470094 CITED4Q96RK1 184 aa7.27□□□□□ -1.25
BRCA2-202ENST00000470094 PRDM6Q9NQX0 595 aa7.27□□□□□ -1.25
BRCA2-202ENST00000470094 PHACTR2O75167 634 aa7.26□□□□□ -1.25
BRCA2-202ENST00000470094 TNFRSF21O75509 655 aa7.26□□□□□ -1.25
BRCA2-202ENST00000470094 CYP2E1P05181 493 aaPredicted RBP7.26□□□□□ -1.25
BRCA2-202ENST00000470094 CES1P23141 567 aa7.26□□□□□ -1.25
BRCA2-202ENST00000470094 C1orf127Q8N9H9 656 aa7.26□□□□□ -1.25
BRCA2-202ENST00000470094 PMEPA1Q969W9 287 aa7.26□□□□□ -1.25
BRCA2-202ENST00000470094 LPIN3Q9BQK8 851 aa7.26□□□□□ -1.25
BRCA2-202ENST00000470094 SMG9Q9H0W8 520 aaKnown RBP7.26□□□□□ -1.25
BRCA2-202ENST00000470094 NOP53Q9NZM5 478 aaKnown RBP7.26□□□□□ -1.25
BRCA2-202ENST00000470094 CNTN3Q9P232 1028 aa7.26□□□□□ -1.25
BRCA2-202ENST00000470094 KANSL3Q9P2N6 904 aa7.26□□□□□ -1.25
BRCA2-202ENST00000470094 SPDYE3A6NKU9 549 aa7.25□□□□□ -1.25
BRCA2-202ENST00000470094 KIF4AO95239 1232 aa7.25□□□□□ -1.25
BRCA2-202ENST00000470094 KCNMA1Q12791 1236 aa7.25□□□□□ -1.25
BRCA2-202ENST00000470094 COL13A1Q5TAT6 717 aaPredicted RBP7.25□□□□□ -1.25
BRCA2-202ENST00000470094 NCAPG2Q86XI2 1143 aa7.25□□□□□ -1.25
BRCA2-202ENST00000470094 HOMEZQ8IX15 550 aa7.25□□□□□ -1.25
BRCA2-202ENST00000470094 PLD4Q96BZ4 506 aa7.25□□□□□ -1.25
BRCA2-202ENST00000470094 DCTN4Q9UJW0 460 aa7.25□□□□□ -1.25
BRCA2-202ENST00000470094 LOC100996750A0A140TA64 210 aa7.24□□□□□ -1.25
BRCA2-202ENST00000470094 NEFLP07196 543 aa7.24□□□□□ -1.25
BRCA2-202ENST00000470094 AFF1P51825 1210 aaKnown RBP7.24□□□□□ -1.25
BRCA2-202ENST00000470094 TTC9Q92623 222 aa7.24□□□□□ -1.25
BRCA2-202ENST00000470094 TRIM11Q96F44 468 aa7.24□□□□□ -1.25
BRCA2-202ENST00000470094 FAM129BQ96TA1 746 aa7.24□□□□□ -1.25
BRCA2-202ENST00000470094 RBCK1Q9BYM8 510 aa7.24□□□□□ -1.25
BRCA2-202ENST00000470094 KRTAP4-6Q9BYQ5 205 aa7.24□□□□□ -1.25
BRCA2-202ENST00000470094 CHRDQ9H2X0 955 aa7.24□□□□□ -1.25
BRCA2-202ENST00000470094 FOXD3Q9UJU5 478 aaPredicted RBP7.24□□□□□ -1.25
BRCA2-202ENST00000470094 NID1P14543 1247 aa7.23□□□□□ -1.25
BRCA2-202ENST00000470094 MAPK1P28482 360 aa7.23□□□□□ -1.25
BRCA2-202ENST00000470094 RASSF7Q02833 373 aa7.23□□□□□ -1.25
BRCA2-202ENST00000470094 DMRTB1Q96MA1 342 aa7.23□□□□□ -1.25
BRCA2-202ENST00000470094 PLVAPQ9BX97 442 aa7.23□□□□□ -1.25
BRCA2-202ENST00000470094 SUV39H2Q9H5I1 410 aa7.23□□□□□ -1.25
BRCA2-202ENST00000470094 EREGO14944 169 aa7.22□□□□□ -1.25
BRCA2-202ENST00000470094 SMNDC1O75940 238 aaKnown RBP eCLIP7.22□□□□□ -1.25
BRCA2-202ENST00000470094 COL9A3Q14050 684 aaPredicted RBP7.22□□□□□ -1.25
BRCA2-202ENST00000470094 TRAPPC3LQ5T215 181 aa7.22□□□□□ -1.25
BRCA2-202ENST00000470094 ALYREFQ86V81 257 aaKnown RBP7.22□□□□□ -1.25
BRCA2-202ENST00000470094 SALL4Q9UJQ4 1053 aa7.22□□□□□ -1.25
BRCA2-202ENST00000470094 AMOTL2Q9Y2J4 779 aa7.22□□□□□ -1.25
BRCA2-202ENST00000470094 EDN3P14138 238 aa7.21□□□□□ -1.26
BRCA2-202ENST00000470094 ATP11AP98196 1134 aa7.21□□□□□ -1.26
BRCA2-202ENST00000470094 PRRT3Q5FWE3 981 aa7.21□□□□□ -1.26
BRCA2-202ENST00000470094 GDF6Q6KF10 455 aaPredicted RBP7.21□□□□□ -1.26
BRCA2-202ENST00000470094 WFDC8Q8IUA0 241 aa7.21□□□□□ -1.26
BRCA2-202ENST00000470094 TMEM151AQ8N4L1 468 aa7.21□□□□□ -1.26
BRCA2-202ENST00000470094 CEP120Q8N960 986 aa7.21□□□□□ -1.26
BRCA2-202ENST00000470094 ZFYVE28Q9HCC9 887 aa7.21□□□□□ -1.26
BRCA2-202ENST00000470094 GPR182O15218 404 aa7.2□□□□□ -1.26
BRCA2-202ENST00000470094 GDF11O95390 407 aa7.2□□□□□ -1.26
BRCA2-202ENST00000470094 COL8A1P27658 744 aa7.2□□□□□ -1.26
BRCA2-202ENST00000470094 GRIK5Q16478 980 aa7.2□□□□□ -1.26
BRCA2-202ENST00000470094 CEP135Q66GS9 1140 aa7.2□□□□□ -1.26
BRCA2-202ENST00000470094 MSL1Q68DK7 614 aa7.2□□□□□ -1.26
BRCA2-202ENST00000470094 SND1Q7KZF4 910 aaKnown RBP eCLIP7.2□□□□□ -1.26
BRCA2-202ENST00000470094 TMC7Q7Z402 723 aa7.2□□□□□ -1.26
BRCA2-202ENST00000470094 PBX4Q9BYU1 374 aa7.2□□□□□ -1.26
BRCA2-202ENST00000470094 NIF3L1Q9GZT8 377 aa7.2□□□□□ -1.26
BRCA2-202ENST00000470094 RASSF4Q9H2L5 321 aa7.2□□□□□ -1.26
BRCA2-202ENST00000470094 GSK3AP49840 483 aa7.19□□□□□ -1.26
BRCA2-202ENST00000470094 RAC1P63000 192 aa7.19□□□□□ -1.26
BRCA2-202ENST00000470094 TRIM28Q13263 835 aaKnown RBP7.19□□□□□ -1.26
BRCA2-202ENST00000470094 ORC1Q13415 861 aa7.19□□□□□ -1.26
BRCA2-202ENST00000470094 ZSCAN29Q8IWY8 852 aaPredicted RBP7.19□□□□□ -1.26
BRCA2-202ENST00000470094 DMRTC2Q8IXT2 367 aaPredicted RBP7.19□□□□□ -1.26
BRCA2-202ENST00000470094 CACTIN-AS1Q8N1I8 211 aa7.19□□□□□ -1.26
BRCA2-202ENST00000470094 ALKBH8Q96BT7 664 aaKnown RBP7.19□□□□□ -1.26
BRCA2-202ENST00000470094 DCAF5Q96JK2 942 aa7.19□□□□□ -1.26
BRCA2-202ENST00000470094 TRIM33Q9UPN9 1127 aa7.19□□□□□ -1.26
BRCA2-202ENST00000470094 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.19□□□□□ -1.26
BRCA2-202ENST00000470094 FAM177BA6PVY3 158 aa7.18□□□□□ -1.26
BRCA2-202ENST00000470094 CPNE3O75131 537 aaKnown RBP7.18□□□□□ -1.26
BRCA2-202ENST00000470094 IGHA2P01877 340 aa7.18□□□□□ -1.26
BRCA2-202ENST00000470094 POLR3DP05423 398 aaPredicted RBP7.18□□□□□ -1.26
BRCA2-202ENST00000470094 SPATA31C1P0DKV0 1188 aa7.18□□□□□ -1.26
BRCA2-202ENST00000470094 IL22RA1Q8N6P7 574 aa7.18□□□□□ -1.26
BRCA2-202ENST00000470094 LACRTQ9GZZ8 138 aa7.18□□□□□ -1.26
BRCA2-202ENST00000470094 DZANK1Q9NVP4 752 aa7.18□□□□□ -1.26
BRCA2-202ENST00000470094 FAM229AH3BQW9 127 aa7.17□□□□□ -1.26
BRCA2-202ENST00000470094 ACPPP15309 386 aa7.17□□□□□ -1.26
BRCA2-202ENST00000470094 PTPRAP18433 802 aa7.17□□□□□ -1.26
BRCA2-202ENST00000470094 OSMRQ99650 979 aa7.17□□□□□ -1.26
BRCA2-202ENST00000470094 DNAJC25Q9H1X3 360 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms