RNA–Protein interactions for RNA: ENST00000470056.5

GAPVD1-215, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 8,923 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-215ENST00000470056 LSG1Q9H089 658 aaKnown RBP8.26□□□□□ -1.09
GAPVD1-215ENST00000470056 GNL3LQ9NVN8 582 aaKnown RBP8.26□□□□□ -1.09
GAPVD1-215ENST00000470056 LAMB4A4D0S4 1761 aa8.26□□□□□ -1.09
GAPVD1-215ENST00000470056 PALLDQ8WX93 1383 aa8.26□□□□□ -1.09
GAPVD1-215ENST00000470056 CASTP20810 708 aaKnown RBP8.26□□□□□ -1.09
GAPVD1-215ENST00000470056 KBTBD3Q8NAB2 608 aa8.26□□□□□ -1.09
GAPVD1-215ENST00000470056 SLC5A1P13866 664 aa8.26□□□□□ -1.09
GAPVD1-215ENST00000470056 HSP90B2PQ58FF3 399 aa8.26□□□□□ -1.09
GAPVD1-215ENST00000470056 VPS53Q5VIR6 699 aa8.26□□□□□ -1.09
GAPVD1-215ENST00000470056 AEBP2Q6ZN18 517 aaPredicted RBP8.26□□□□□ -1.09
GAPVD1-215ENST00000470056 KLHDC4Q8TBB5 520 aa8.26□□□□□ -1.09
GAPVD1-215ENST00000470056 JARID2Q92833 1246 aaPredicted RBP8.26□□□□□ -1.09
GAPVD1-215ENST00000470056 TMX3Q96JJ7 454 aa8.26□□□□□ -1.09
GAPVD1-215ENST00000470056 CDC5LQ99459 802 aaKnown RBP8.26□□□□□ -1.09
GAPVD1-215ENST00000470056 ZBTB1Q9Y2K1 713 aa8.26□□□□□ -1.09
GAPVD1-215ENST00000470056 CASP7P55210 303 aa8.26□□□□□ -1.09
GAPVD1-215ENST00000470056 FOXO4P98177 505 aa8.26□□□□□ -1.09
GAPVD1-215ENST00000470056 TNPO1Q92973 898 aaKnown RBP8.26□□□□□ -1.09
GAPVD1-215ENST00000470056 MROH5Q6ZUA9 1318 aa8.25□□□□□ -1.09
GAPVD1-215ENST00000470056 NLRP10Q86W26 655 aa8.25□□□□□ -1.09
GAPVD1-215ENST00000470056 IL17RAQ96F46 866 aa8.25□□□□□ -1.09
GAPVD1-215ENST00000470056 DBNDD2Q9BQY9 259 aa8.25□□□□□ -1.09
GAPVD1-215ENST00000470056 DBNLQ9UJU6 430 aaKnown RBP8.25□□□□□ -1.09
GAPVD1-215ENST00000470056 ABCA3Q99758 1704 aa8.25□□□□□ -1.09
GAPVD1-215ENST00000470056 CTSWP56202 376 aa8.25□□□□□ -1.09
GAPVD1-215ENST00000470056 FAM89AQ96GI7 184 aa8.25□□□□□ -1.09
GAPVD1-215ENST00000470056 BECN2A8MW95 431 aa8.25□□□□□ -1.09
GAPVD1-215ENST00000470056 USP8P40818 1118 aa8.25□□□□□ -1.09
GAPVD1-215ENST00000470056 NOL8Q76FK4 1167 aaKnown RBP8.25□□□□□ -1.09
GAPVD1-215ENST00000470056 ACSBG1Q96GR2 724 aa8.25□□□□□ -1.09
GAPVD1-215ENST00000470056 NYXQ9GZU5 481 aa8.25□□□□□ -1.09
GAPVD1-215ENST00000470056 RBM8AQ9Y5S9 174 aaKnown RBP8.25□□□□□ -1.09
GAPVD1-215ENST00000470056 TRAK2O60296 914 aa8.25□□□□□ -1.09
GAPVD1-215ENST00000470056 A0A1B0GUL7 405 aa8.25□□□□□ -1.09
GAPVD1-215ENST00000470056 RNF113AO15541 343 aaKnown RBP8.25□□□□□ -1.09
GAPVD1-215ENST00000470056 ITGA6P23229 1130 aa8.25□□□□□ -1.09
GAPVD1-215ENST00000470056 CLEC4GQ6UXB4 293 aa8.25□□□□□ -1.09
GAPVD1-215ENST00000470056 CRKLP46109 303 aaKnown RBP8.24□□□□□ -1.09
GAPVD1-215ENST00000470056 WASHC4Q2M389 1173 aa8.24□□□□□ -1.09
GAPVD1-215ENST00000470056 NOC3LQ8WTT2 800 aaKnown RBP8.24□□□□□ -1.09
GAPVD1-215ENST00000470056 KIF2AO00139 706 aaPredicted RBP8.24□□□□□ -1.09
GAPVD1-215ENST00000470056 NAT10Q9H0A0 1025 aaKnown RBP8.24□□□□□ -1.09
GAPVD1-215ENST00000470056 USP21Q9UK80 565 aa8.24□□□□□ -1.09
GAPVD1-215ENST00000470056 LTBP4Q8N2S1 1624 aa8.24□□□□□ -1.09
GAPVD1-215ENST00000470056 GOLIM4O00461 696 aa8.24□□□□□ -1.09
GAPVD1-215ENST00000470056 HOOK1Q9UJC3 728 aaKnown RBP8.24□□□□□ -1.09
GAPVD1-215ENST00000470056 SNX14Q9Y5W7 946 aa8.24□□□□□ -1.09
GAPVD1-215ENST00000470056 UPF3BQ9BZI7 483 aaKnown RBP8.24□□□□□ -1.09
GAPVD1-215ENST00000470056 ZPR1O75312 459 aa8.24□□□□□ -1.09
GAPVD1-215ENST00000470056 SSFA2P28290 1259 aa8.24□□□□□ -1.09
GAPVD1-215ENST00000470056 FAM98CQ17RN3 349 aaKnown RBP8.24□□□□□ -1.09
GAPVD1-215ENST00000470056 CREB3L3Q68CJ9 461 aa8.24□□□□□ -1.09
GAPVD1-215ENST00000470056 CSF1RP07333 972 aa8.23□□□□□ -1.09
GAPVD1-215ENST00000470056 FKBP4Q02790 459 aaKnown RBP eCLIP8.23□□□□□ -1.09
GAPVD1-215ENST00000470056 MAP4K1Q92918 833 aa8.23□□□□□ -1.09
GAPVD1-215ENST00000470056 NIP7Q9Y221 180 aaKnown RBP eCLIP8.23□□□□□ -1.09
GAPVD1-215ENST00000470056 PHLPP1O60346 1717 aa8.23□□□□□ -1.09
GAPVD1-215ENST00000470056 IPO7O95373 1038 aaKnown RBP8.23□□□□□ -1.09
GAPVD1-215ENST00000470056 PDCL3Q9H2J4 239 aa8.23□□□□□ -1.09
GAPVD1-215ENST00000470056 TSR1Q2NL82 804 aaKnown RBP8.23□□□□□ -1.09
GAPVD1-215ENST00000470056 EIF5P55010 431 aaKnown RBP8.23□□□□□ -1.09
GAPVD1-215ENST00000470056 ESPNB1AK53 854 aa8.23□□□□□ -1.09
GAPVD1-215ENST00000470056 TRDNQ13061 729 aa8.23□□□□□ -1.09
GAPVD1-215ENST00000470056 PUM3Q15397 648 aaKnown RBP8.23□□□□□ -1.09
GAPVD1-215ENST00000470056 MARCH10Q8NA82 808 aaPredicted RBP8.23□□□□□ -1.09
GAPVD1-215ENST00000470056 DSCC1Q9BVC3 393 aa8.23□□□□□ -1.09
GAPVD1-215ENST00000470056 SNRKQ9NRH2 765 aa8.23□□□□□ -1.09
GAPVD1-215ENST00000470056 DDX46Q7L014 1031 aaKnown RBP8.23□□□□□ -1.09
GAPVD1-215ENST00000470056 RUFY3Q7L099 469 aa8.23□□□□□ -1.09
GAPVD1-215ENST00000470056 XAGE2Q96GT9 111 aa8.23□□□□□ -1.09
GAPVD1-215ENST00000470056 SLIT2O94813 1529 aa8.23□□□□□ -1.09
GAPVD1-215ENST00000470056 TLR7Q9NYK1 1049 aaKnown RBP8.22□□□□□ -1.09
GAPVD1-215ENST00000470056 PLCH1Q4KWH8 1693 aa8.22□□□□□ -1.09
GAPVD1-215ENST00000470056 IMMTQ16891 758 aaKnown RBP8.22□□□□□ -1.09
GAPVD1-215ENST00000470056 ZNF34Q8IZ26 560 aa8.22□□□□□ -1.09
GAPVD1-215ENST00000470056 CUL4AQ13619 759 aa8.22□□□□□ -1.09
GAPVD1-215ENST00000470056 RALYLQ86SE5 291 aaKnown RBP8.22□□□□□ -1.09
GAPVD1-215ENST00000470056 ANKRD20A12PQ8NF67 263 aa8.22□□□□□ -1.09
GAPVD1-215ENST00000470056 C5P01031 1676 aa8.22□□□□□ -1.09
GAPVD1-215ENST00000470056 ATG9AQ7Z3C6 839 aa8.22□□□□□ -1.09
GAPVD1-215ENST00000470056 LPIN2Q92539 896 aa8.22□□□□□ -1.09
GAPVD1-215ENST00000470056 ZSCAN30Q86W11 494 aa8.22□□□□□ -1.09
GAPVD1-215ENST00000470056 CCDC85AQ96PX6 553 aaPredicted RBP8.22□□□□□ -1.09
GAPVD1-215ENST00000470056 ZNF609O15014 1411 aa8.22□□□□□ -1.09
GAPVD1-215ENST00000470056 MAP3K12Q12852 859 aa8.22□□□□□ -1.09
GAPVD1-215ENST00000470056 TTLL11Q8NHH1 800 aa8.22□□□□□ -1.09
GAPVD1-215ENST00000470056 DHX16O60231 1041 aaKnown RBP8.21□□□□□ -1.09
GAPVD1-215ENST00000470056 TRPC5Q9UL62 973 aaPredicted RBP8.21□□□□□ -1.09
GAPVD1-215ENST00000470056 PALD1Q9ULE6 856 aa8.21□□□□□ -1.09
GAPVD1-215ENST00000470056 NEK1Q96PY6 1258 aa8.21□□□□□ -1.09
GAPVD1-215ENST00000470056 SLC27A2O14975 620 aa8.21□□□□□ -1.09
GAPVD1-215ENST00000470056 NACAP1Q9BZK3 213 aa8.21□□□□□ -1.09
GAPVD1-215ENST00000470056 ZSWIM6Q9HCJ5 1215 aa8.21□□□□□ -1.09
GAPVD1-215ENST00000470056 DDIT3P35638 169 aa8.21□□□□□ -1.1
GAPVD1-215ENST00000470056 CLEC17AQ6ZS10 378 aa8.21□□□□□ -1.1
GAPVD1-215ENST00000470056 VPS37DQ86XT2 251 aa8.21□□□□□ -1.1
GAPVD1-215ENST00000470056 ZNF512BQ96KM6 892 aaPredicted RBP8.21□□□□□ -1.1
GAPVD1-215ENST00000470056 FAM227BQ96M60 508 aa8.21□□□□□ -1.1
GAPVD1-215ENST00000470056 CNTNAP4Q9C0A0 1308 aa8.21□□□□□ -1.1
GAPVD1-215ENST00000470056 LRRC24Q50LG9 513 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms