RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 MAP7D2Q96T17 732 aa11.24□□□□□ -0.61
TOP3A-203ENST00000469739 A0A1B0GUL7 405 aa11.24□□□□□ -0.61
TOP3A-203ENST00000469739 ST3GAL1Q11201 340 aa11.24□□□□□ -0.61
TOP3A-203ENST00000469739 WASHC4Q2M389 1173 aa11.24□□□□□ -0.61
TOP3A-203ENST00000469739 CCDC57Q2TAC2 916 aa11.24□□□□□ -0.61
TOP3A-203ENST00000469739 TTLL5Q6EMB2 1281 aa11.24□□□□□ -0.61
TOP3A-203ENST00000469739 MAP4K1Q92918 833 aa11.24□□□□□ -0.61
TOP3A-203ENST00000469739 WDR33Q9C0J8 1336 aaKnown RBP11.23□□□□□ -0.61
TOP3A-203ENST00000469739 JAK2O60674 1132 aa11.23□□□□□ -0.61
TOP3A-203ENST00000469739 PIP4K2BP78356 416 aa11.23□□□□□ -0.61
TOP3A-203ENST00000469739 ATG9AQ7Z3C6 839 aa11.23□□□□□ -0.61
TOP3A-203ENST00000469739 STK11IPQ8N1F8 1099 aa11.23□□□□□ -0.61
TOP3A-203ENST00000469739 ANP32BQ92688 251 aaKnown RBP11.23□□□□□ -0.61
TOP3A-203ENST00000469739 CARD10Q9BWT7 1032 aa11.23□□□□□ -0.61
TOP3A-203ENST00000469739 TAF5LO75529 589 aa11.23□□□□□ -0.61
TOP3A-203ENST00000469739 IFIT1P09914 478 aaKnown RBP11.23□□□□□ -0.61
TOP3A-203ENST00000469739 CASP7P55210 303 aa11.23□□□□□ -0.61
TOP3A-203ENST00000469739 LARP1BQ659C4 914 aaKnown RBP11.23□□□□□ -0.61
TOP3A-203ENST00000469739 COL15A1P39059 1388 aa11.23□□□□□ -0.61
TOP3A-203ENST00000469739 USP42Q9H9J4 1324 aaKnown RBP11.23□□□□□ -0.61
TOP3A-203ENST00000469739 H7C1W4 665 aa11.22□□□□□ -0.61
TOP3A-203ENST00000469739 CCT2P78371 535 aaKnown RBP11.22□□□□□ -0.61
TOP3A-203ENST00000469739 KCTD17Q8N5Z5 321 aa11.22□□□□□ -0.61
TOP3A-203ENST00000469739 INTS4Q96HW7 963 aaKnown RBP11.22□□□□□ -0.61
TOP3A-203ENST00000469739 ZSWIM6Q9HCJ5 1215 aa11.22□□□□□ -0.61
TOP3A-203ENST00000469739 ZSCAN22P10073 491 aaPredicted RBP11.22□□□□□ -0.61
TOP3A-203ENST00000469739 SCARF1Q14162 830 aa11.22□□□□□ -0.61
TOP3A-203ENST00000469739 ZFP91Q96JP5 570 aaPredicted RBP11.22□□□□□ -0.61
TOP3A-203ENST00000469739 ATG3Q9NT62 314 aa11.22□□□□□ -0.61
TOP3A-203ENST00000469739 FAM13BQ9NYF5 915 aa11.22□□□□□ -0.61
TOP3A-203ENST00000469739 ZBTB1Q9Y2K1 713 aa11.22□□□□□ -0.61
TOP3A-203ENST00000469739 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.22□□□□□ -0.61
TOP3A-203ENST00000469739 RPAP1Q9BWH6 1393 aaPredicted RBP11.22□□□□□ -0.61
TOP3A-203ENST00000469739 UBR2Q8IWV8 1755 aa11.22□□□□□ -0.61
TOP3A-203ENST00000469739 PAPPAQ13219 1627 aa11.22□□□□□ -0.61
TOP3A-203ENST00000469739 ERVV-2B6SEH9 535 aa11.22□□□□□ -0.61
TOP3A-203ENST00000469739 CYP21A2P08686 494 aa11.22□□□□□ -0.61
TOP3A-203ENST00000469739 ATP5JP18859 108 aa11.22□□□□□ -0.61
TOP3A-203ENST00000469739 GUCY1B3Q02153 619 aa11.22□□□□□ -0.61
TOP3A-203ENST00000469739 CDC37L1Q7L3B6 337 aa11.22□□□□□ -0.61
TOP3A-203ENST00000469739 BRF1Q92994 677 aa11.22□□□□□ -0.61
TOP3A-203ENST00000469739 CEP126Q9P2H0 1117 aa11.22□□□□□ -0.61
TOP3A-203ENST00000469739 KIF6Q6ZMV9 814 aa11.21□□□□□ -0.61
TOP3A-203ENST00000469739 CLEC17AQ6ZS10 378 aa11.21□□□□□ -0.61
TOP3A-203ENST00000469739 GPHNQ9NQX3 736 aaPredicted RBP11.21□□□□□ -0.61
TOP3A-203ENST00000469739 PAG1Q9NWQ8 432 aa11.21□□□□□ -0.61
TOP3A-203ENST00000469739 EYA2O00167 538 aa11.21□□□□□ -0.62
TOP3A-203ENST00000469739 OFD1O75665 1012 aa11.21□□□□□ -0.62
TOP3A-203ENST00000469739 RABL6Q3YEC7 729 aaPredicted RBP11.21□□□□□ -0.62
TOP3A-203ENST00000469739 RNF20Q5VTR2 975 aa11.21□□□□□ -0.62
TOP3A-203ENST00000469739 Q6ZUG5 572 aa11.21□□□□□ -0.62
TOP3A-203ENST00000469739 SMAP1Q8IYB5 467 aaPredicted RBP11.21□□□□□ -0.62
TOP3A-203ENST00000469739 SLC4A9Q96Q91 983 aa11.21□□□□□ -0.62
TOP3A-203ENST00000469739 ARFGEF2Q9Y6D5 1785 aa11.21□□□□□ -0.62
TOP3A-203ENST00000469739 AFDNP55196 1824 aaKnown RBP11.21□□□□□ -0.62
TOP3A-203ENST00000469739 PTMSP20962 102 aa11.2□□□□□ -0.62
TOP3A-203ENST00000469739 CAMK4Q16566 473 aa11.2□□□□□ -0.62
TOP3A-203ENST00000469739 TMED8Q6PL24 325 aaPredicted RBP11.2□□□□□ -0.62
TOP3A-203ENST00000469739 NCOA5Q9HCD5 579 aaKnown RBP11.2□□□□□ -0.62
TOP3A-203ENST00000469739 F13A1P00488 732 aa11.2□□□□□ -0.62
TOP3A-203ENST00000469739 HCLS1P14317 486 aaPredicted RBP11.2□□□□□ -0.62
TOP3A-203ENST00000469739 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.2□□□□□ -0.62
TOP3A-203ENST00000469739 GREM2Q9H772 168 aa11.2□□□□□ -0.62
TOP3A-203ENST00000469739 TRMT112Q9UI30 125 aaKnown RBP11.2□□□□□ -0.62
TOP3A-203ENST00000469739 HIP1O00291 1037 aa11.2□□□□□ -0.62
TOP3A-203ENST00000469739 ZNF609O15014 1411 aa11.2□□□□□ -0.62
TOP3A-203ENST00000469739 TERF1P54274 439 aa11.2□□□□□ -0.62
TOP3A-203ENST00000469739 MCMDC2Q4G0Z9 681 aa11.2□□□□□ -0.62
TOP3A-203ENST00000469739 TTC39AQ5SRH9 613 aa11.2□□□□□ -0.62
TOP3A-203ENST00000469739 GIMAP6Q6P9H5 292 aa11.2□□□□□ -0.62
TOP3A-203ENST00000469739 LDHAL6AQ6ZMR3 332 aa11.2□□□□□ -0.62
TOP3A-203ENST00000469739 CNNM1Q9NRU3 951 aa11.2□□□□□ -0.62
TOP3A-203ENST00000469739 TOGARAM1Q9Y4F4 1720 aa11.2□□□□□ -0.62
TOP3A-203ENST00000469739 TCIRG1Q13488 830 aa11.19□□□□□ -0.62
TOP3A-203ENST00000469739 TOB2Q14106 344 aaPredicted RBP11.19□□□□□ -0.62
TOP3A-203ENST00000469739 STOX1Q6ZVD7 989 aa11.19□□□□□ -0.62
TOP3A-203ENST00000469739 CCDC191Q8NCU4 936 aa11.19□□□□□ -0.62
TOP3A-203ENST00000469739 NEK1Q96PY6 1258 aa11.19□□□□□ -0.62
TOP3A-203ENST00000469739 MTMR6Q9Y217 621 aa11.19□□□□□ -0.62
TOP3A-203ENST00000469739 EXOC5O00471 708 aa11.19□□□□□ -0.62
TOP3A-203ENST00000469739 STARD3NLO95772 234 aa11.19□□□□□ -0.62
TOP3A-203ENST00000469739 RPS6KB1P23443 525 aa11.19□□□□□ -0.62
TOP3A-203ENST00000469739 PSMA5P28066 241 aa11.19□□□□□ -0.62
TOP3A-203ENST00000469739 APOBRQ0VD83 1088 aa11.19□□□□□ -0.62
TOP3A-203ENST00000469739 IFIT5Q13325 482 aaKnown RBP11.19□□□□□ -0.62
TOP3A-203ENST00000469739 METTL24Q5JXM2 366 aa11.19□□□□□ -0.62
TOP3A-203ENST00000469739 FBXO41Q8TF61 875 aa11.19□□□□□ -0.62
TOP3A-203ENST00000469739 XAGE2Q96GT9 111 aa11.19□□□□□ -0.62
TOP3A-203ENST00000469739 HAUS7Q99871 368 aa11.19□□□□□ -0.62
TOP3A-203ENST00000469739 IQSEC3Q9UPP2 1182 aaPredicted RBP11.19□□□□□ -0.62
TOP3A-203ENST00000469739 FAM182BQ5T319 152 aa11.18□□□□□ -0.62
TOP3A-203ENST00000469739 ZSCAN30Q86W11 494 aa11.18□□□□□ -0.62
TOP3A-203ENST00000469739 IL15P40933 162 aaPredicted RBP11.18□□□□□ -0.62
TOP3A-203ENST00000469739 ZAP70P43403 619 aa11.18□□□□□ -0.62
TOP3A-203ENST00000469739 KBTBD3Q8NAB2 608 aa11.18□□□□□ -0.62
TOP3A-203ENST00000469739 APPP05067 770 aa11.18□□□□□ -0.62
TOP3A-203ENST00000469739 ITGA6P23229 1130 aa11.18□□□□□ -0.62
TOP3A-203ENST00000469739 CCDC24Q8N4L8 307 aa11.18□□□□□ -0.62
TOP3A-203ENST00000469739 ROBO1Q9Y6N7 1651 aa11.17□□□□□ -0.62
TOP3A-203ENST00000469739 M0R2C6 588 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms