RNA–Protein interactions for RNA: ENST00000469534.1

ITGA6-208, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-208ENST00000469534 GPCPD1Q9NPB8 672 aa6.69□□□□□ -1.34
ITGA6-208ENST00000469534 ATG3Q9NT62 314 aa6.69□□□□□ -1.34
ITGA6-208ENST00000469534 FAM217BQ9NTX9 383 aaPredicted RBP6.69□□□□□ -1.34
ITGA6-208ENST00000469534 CHPF2Q9P2E5 772 aa6.69□□□□□ -1.34
ITGA6-208ENST00000469534 ZNF330Q9Y3S2 320 aaPredicted RBP6.69□□□□□ -1.34
ITGA6-208ENST00000469534 USP16Q9Y5T5 823 aa6.69□□□□□ -1.34
ITGA6-208ENST00000469534 TJP1Q07157 1748 aa6.69□□□□□ -1.34
ITGA6-208ENST00000469534 RGS12O14924 1447 aa6.68□□□□□ -1.34
ITGA6-208ENST00000469534 NHSQ6T4R5 1651 aa6.68□□□□□ -1.34
ITGA6-208ENST00000469534 CACNA1FO60840 1977 aa6.68□□□□□ -1.34
ITGA6-208ENST00000469534 F6X3S4 739 aa6.68□□□□□ -1.34
ITGA6-208ENST00000469534 RLBP1P12271 317 aa6.68□□□□□ -1.34
ITGA6-208ENST00000469534 RXRBP28702 533 aa6.68□□□□□ -1.34
ITGA6-208ENST00000469534 RBM6P78332 1123 aaKnown RBP6.68□□□□□ -1.34
ITGA6-208ENST00000469534 AIMP1Q12904 312 aaKnown RBP6.68□□□□□ -1.34
ITGA6-208ENST00000469534 FOXC1Q12948 553 aa6.68□□□□□ -1.34
ITGA6-208ENST00000469534 DNAJC10Q8IXB1 793 aa6.68□□□□□ -1.34
ITGA6-208ENST00000469534 CRIPAKQ8N1N5 446 aa6.68□□□□□ -1.34
ITGA6-208ENST00000469534 REPIN1Q9BWE0 567 aaKnown RBP6.68□□□□□ -1.34
ITGA6-208ENST00000469534 PHAXQ9H814 394 aaKnown RBP6.68□□□□□ -1.34
ITGA6-208ENST00000469534 COG6Q9Y2V7 657 aa6.68□□□□□ -1.34
ITGA6-208ENST00000469534 AFDNP55196 1824 aaKnown RBP6.67□□□□□ -1.34
ITGA6-208ENST00000469534 HOXA2O43364 376 aa6.67□□□□□ -1.34
ITGA6-208ENST00000469534 GIGYF1O75420 1035 aaPredicted RBP6.67□□□□□ -1.34
ITGA6-208ENST00000469534 CLCN1P35523 988 aa6.67□□□□□ -1.34
ITGA6-208ENST00000469534 ZKSCAN2Q63HK3 967 aa6.67□□□□□ -1.34
ITGA6-208ENST00000469534 SMIM5Q71RC9 77 aa6.67□□□□□ -1.34
ITGA6-208ENST00000469534 KRT27Q7Z3Y8 459 aa6.67□□□□□ -1.34
ITGA6-208ENST00000469534 HLA-CQ95604 372 aa6.67□□□□□ -1.34
ITGA6-208ENST00000469534 FMNL2Q96PY5 1086 aa6.67□□□□□ -1.34
ITGA6-208ENST00000469534 USB1Q9BQ65 265 aaKnown RBP6.67□□□□□ -1.34
ITGA6-208ENST00000469534 STK31Q9BXU1 1019 aa6.67□□□□□ -1.34
ITGA6-208ENST00000469534 TOR4AQ9NXH8 423 aa6.67□□□□□ -1.34
ITGA6-208ENST00000469534 RNF123Q5XPI4 1314 aa6.67□□□□□ -1.34
ITGA6-208ENST00000469534 HEG1Q9ULI3 1381 aa6.67□□□□□ -1.34
ITGA6-208ENST00000469534 BCL9O00512 1426 aa6.67□□□□□ -1.34
ITGA6-208ENST00000469534 DXOO77932 396 aaKnown RBP6.66□□□□□ -1.34
ITGA6-208ENST00000469534 TRIM37O94972 964 aa6.66□□□□□ -1.34
ITGA6-208ENST00000469534 A1BGP04217 495 aa6.66□□□□□ -1.34
ITGA6-208ENST00000469534 TRIM27P14373 513 aa6.66□□□□□ -1.34
ITGA6-208ENST00000469534 CCDC30Q5VVM6 783 aa6.66□□□□□ -1.34
ITGA6-208ENST00000469534 B4GALNT3Q6L9W6 998 aa6.66□□□□□ -1.34
ITGA6-208ENST00000469534 SLC4A10Q6U841 1118 aa6.66□□□□□ -1.34
ITGA6-208ENST00000469534 ITPRIPQ8IWB1 547 aa6.66□□□□□ -1.34
ITGA6-208ENST00000469534 FTSJ3Q8IY81 847 aaKnown RBP6.66□□□□□ -1.34
ITGA6-208ENST00000469534 TMEM57Q8N5G2 664 aa6.66□□□□□ -1.34
ITGA6-208ENST00000469534 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.66□□□□□ -1.34
ITGA6-208ENST00000469534 SLC4A9Q96Q91 983 aa6.66□□□□□ -1.34
ITGA6-208ENST00000469534 ARXQ96QS3 562 aa6.66□□□□□ -1.34
ITGA6-208ENST00000469534 PALLDQ8WX93 1383 aa6.66□□□□□ -1.34
ITGA6-208ENST00000469534 PLEKHG2Q9H7P9 1386 aa6.66□□□□□ -1.34
ITGA6-208ENST00000469534 MYH14Q7Z406 1995 aaKnown RBP6.66□□□□□ -1.34
ITGA6-208ENST00000469534 ARFGEF2Q9Y6D5 1785 aa6.65□□□□□ -1.34
ITGA6-208ENST00000469534 ZMYND10O75800 440 aa6.65□□□□□ -1.34
ITGA6-208ENST00000469534 AVPP01185 164 aa6.65□□□□□ -1.34
ITGA6-208ENST00000469534 SNRPA1P09661 255 aaKnown RBP6.65□□□□□ -1.34
ITGA6-208ENST00000469534 CT47B1P0C2W7 299 aaPredicted RBP6.65□□□□□ -1.34
ITGA6-208ENST00000469534 FLIIQ13045 1269 aa6.65□□□□□ -1.34
ITGA6-208ENST00000469534 FKBP5Q13451 457 aaPredicted RBP6.65□□□□□ -1.34
ITGA6-208ENST00000469534 ITPK1Q13572 414 aa6.65□□□□□ -1.34
ITGA6-208ENST00000469534 ALDH1L2Q3SY69 923 aa6.65□□□□□ -1.34
ITGA6-208ENST00000469534 LCE2AQ5TA79 106 aaPredicted RBP6.65□□□□□ -1.34
ITGA6-208ENST00000469534 TREML4Q6UXN2 200 aa6.65□□□□□ -1.34
ITGA6-208ENST00000469534 ATF7IPQ6VMQ6 1270 aa6.65□□□□□ -1.34
ITGA6-208ENST00000469534 DZIP1LQ8IYY4 767 aaKnown RBP6.65□□□□□ -1.34
ITGA6-208ENST00000469534 C1orf115Q9H7X2 142 aa6.65□□□□□ -1.34
ITGA6-208ENST00000469534 BABAM1Q9NWV8 329 aa6.65□□□□□ -1.34
ITGA6-208ENST00000469534 TAF1LQ8IZX4 1826 aa6.64□□□□□ -1.35
ITGA6-208ENST00000469534 ZBTB24O43167 697 aaPredicted RBP6.64□□□□□ -1.35
ITGA6-208ENST00000469534 NBPF14Q5TI25 921 aa6.64□□□□□ -1.35
ITGA6-208ENST00000469534 NBPF10Q6P3W6 841 aaKnown RBP6.64□□□□□ -1.35
ITGA6-208ENST00000469534 NBPF15Q8N660 670 aa6.64□□□□□ -1.35
ITGA6-208ENST00000469534 XAGE3Q8WTP9 111 aa6.64□□□□□ -1.35
ITGA6-208ENST00000469534 JARID2Q92833 1246 aaPredicted RBP6.64□□□□□ -1.35
ITGA6-208ENST00000469534 KIF16BQ96L93 1317 aa6.64□□□□□ -1.35
ITGA6-208ENST00000469534 LY75O60449 1722 aa6.64□□□□□ -1.35
ITGA6-208ENST00000469534 COL5A3P25940 1745 aaPredicted RBP6.64□□□□□ -1.35
ITGA6-208ENST00000469534 LOC102724428A0A0B4J2F2 783 aa6.63□□□□□ -1.35
ITGA6-208ENST00000469534 IPO8O15397 1037 aaKnown RBP6.63□□□□□ -1.35
ITGA6-208ENST00000469534 SIK1P57059 783 aa6.63□□□□□ -1.35
ITGA6-208ENST00000469534 GUCA2AQ02747 115 aa6.63□□□□□ -1.35
ITGA6-208ENST00000469534 CTC1Q2NKJ3 1217 aa6.63□□□□□ -1.35
ITGA6-208ENST00000469534 NUP188Q5SRE5 1749 aa6.63□□□□□ -1.35
ITGA6-208ENST00000469534 TTLL7Q6ZT98 887 aa6.63□□□□□ -1.35
ITGA6-208ENST00000469534 COPS6Q7L5N1 327 aa6.63□□□□□ -1.35
ITGA6-208ENST00000469534 CYP4X1Q8N118 509 aa6.63□□□□□ -1.35
ITGA6-208ENST00000469534 LINC00116Q8NCU8 138 aa6.63□□□□□ -1.35
ITGA6-208ENST00000469534 ZBTB3Q9H5J0 574 aa6.63□□□□□ -1.35
ITGA6-208ENST00000469534 TNS1Q9HBL0 1735 aaKnown RBP6.63□□□□□ -1.35
ITGA6-208ENST00000469534 ZBTB1Q9Y2K1 713 aa6.63□□□□□ -1.35
ITGA6-208ENST00000469534 NUP98P52948 1817 aa6.62□□□□□ -1.35
ITGA6-208ENST00000469534 N4BP2Q86UW6 1770 aaPredicted RBP6.62□□□□□ -1.35
ITGA6-208ENST00000469534 ADCY9O60503 1353 aa6.62□□□□□ -1.35
ITGA6-208ENST00000469534 PI4KAP2A4QPH2 592 aa6.62□□□□□ -1.35
ITGA6-208ENST00000469534 WNT7AO00755 349 aa6.62□□□□□ -1.35
ITGA6-208ENST00000469534 AXIN1O15169 862 aa6.62□□□□□ -1.35
ITGA6-208ENST00000469534 HOXB7P09629 217 aa6.62□□□□□ -1.35
ITGA6-208ENST00000469534 CYP19A1P11511 503 aaPredicted RBP6.62□□□□□ -1.35
ITGA6-208ENST00000469534 SSTR3P32745 418 aaPredicted RBP6.62□□□□□ -1.35
ITGA6-208ENST00000469534 TRIM32Q13049 653 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms