RNA–Protein interactions for RNA: ENST00000469455.1

TMC1-203, Transcript of transmembrane channel like 1, humanhuman

TSL 5

Gene TMC1, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-203ENST00000469455 SEPT3Q9UH03 358 aa9.26□□□□□ -0.93
TMC1-203ENST00000469455 INSRP06213 1382 aa9.25□□□□□ -0.93
TMC1-203ENST00000469455 FKBP4Q02790 459 aaKnown RBP eCLIP9.25□□□□□ -0.93
TMC1-203ENST00000469455 SF3B2Q13435 895 aaKnown RBP9.25□□□□□ -0.93
TMC1-203ENST00000469455 ESCO1Q5FWF5 840 aa9.25□□□□□ -0.93
TMC1-203ENST00000469455 IFFO2Q5TF58 517 aa9.25□□□□□ -0.93
TMC1-203ENST00000469455 NLRP13Q86W25 1043 aa9.25□□□□□ -0.93
TMC1-203ENST00000469455 SCG3Q8WXD2 468 aaKnown RBP9.25□□□□□ -0.93
TMC1-203ENST00000469455 NUDT16Q96DE0 195 aaKnown RBP9.25□□□□□ -0.93
TMC1-203ENST00000469455 PGPEP1Q9NXJ5 209 aa9.25□□□□□ -0.93
TMC1-203ENST00000469455 EMILIN1Q9Y6C2 1016 aa9.25□□□□□ -0.93
TMC1-203ENST00000469455 IQSEC2Q5JU85 1478 aa9.25□□□□□ -0.93
TMC1-203ENST00000469455 C1orf167Q5SNV9 1468 aa9.25□□□□□ -0.93
TMC1-203ENST00000469455 USP54Q70EL1 1684 aa9.25□□□□□ -0.93
TMC1-203ENST00000469455 A0A1W2PP64 1363 aa9.24□□□□□ -0.93
TMC1-203ENST00000469455 PARD3Q8TEW0 1356 aa9.24□□□□□ -0.93
TMC1-203ENST00000469455 E9PSI1 815 aa9.24□□□□□ -0.93
TMC1-203ENST00000469455 H3BRB1 525 aa9.24□□□□□ -0.93
TMC1-203ENST00000469455 C21orf2O43822 256 aa9.24□□□□□ -0.93
TMC1-203ENST00000469455 STAU1O95793 577 aaKnown RBP9.24□□□□□ -0.93
TMC1-203ENST00000469455 ADD1P35611 737 aaKnown RBP9.24□□□□□ -0.93
TMC1-203ENST00000469455 EPHA4P54764 986 aa9.24□□□□□ -0.93
TMC1-203ENST00000469455 IRX6P78412 446 aaPredicted RBP9.24□□□□□ -0.93
TMC1-203ENST00000469455 ZNF211Q13398 564 aaPredicted RBP9.24□□□□□ -0.93
TMC1-203ENST00000469455 GLYCTKQ8IVS8 523 aa9.24□□□□□ -0.93
TMC1-203ENST00000469455 PURBQ96QR8 312 aaKnown RBP9.24□□□□□ -0.93
TMC1-203ENST00000469455 TUT1Q9H6E5 874 aaKnown RBP9.24□□□□□ -0.93
TMC1-203ENST00000469455 SERTAD1Q9UHV2 236 aa9.24□□□□□ -0.93
TMC1-203ENST00000469455 RNF123Q5XPI4 1314 aa9.24□□□□□ -0.93
TMC1-203ENST00000469455 POLR3AO14802 1390 aaPredicted RBP9.24□□□□□ -0.93
TMC1-203ENST00000469455 TRPM3Q9HCF6 1732 aaPredicted RBP9.23□□□□□ -0.93
TMC1-203ENST00000469455 NR3C2P08235 984 aa9.23□□□□□ -0.93
TMC1-203ENST00000469455 CAPN12Q6ZSI9 719 aa9.23□□□□□ -0.93
TMC1-203ENST00000469455 SLC12A5Q9H2X9 1139 aa9.23□□□□□ -0.93
TMC1-203ENST00000469455 ANO2Q9NQ90 1003 aa9.23□□□□□ -0.93
TMC1-203ENST00000469455 DNMT3AQ9Y6K1 912 aaPredicted RBP9.23□□□□□ -0.93
TMC1-203ENST00000469455 NHSL1Q5SYE7 1610 aa9.23□□□□□ -0.93
TMC1-203ENST00000469455 NSD3Q9BZ95 1437 aa9.22□□□□□ -0.93
TMC1-203ENST00000469455 MARF1Q9Y4F3 1742 aaKnown RBP9.22□□□□□ -0.93
TMC1-203ENST00000469455 RBM47A0AV96 593 aaKnown RBP9.22□□□□□ -0.93
TMC1-203ENST00000469455 CNGB1Q14028 1251 aaPredicted RBP9.22□□□□□ -0.93
TMC1-203ENST00000469455 SPRYD7Q5W111 196 aa9.22□□□□□ -0.93
TMC1-203ENST00000469455 TSPAN10Q9H1Z9 355 aaPredicted RBP9.22□□□□□ -0.93
TMC1-203ENST00000469455 PANK3Q9H999 370 aa9.22□□□□□ -0.93
TMC1-203ENST00000469455 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.22□□□□□ -0.93
TMC1-203ENST00000469455 CABP1Q9NZU7 370 aa9.22□□□□□ -0.93
TMC1-203ENST00000469455 NPC1L1Q9UHC9 1359 aa9.22□□□□□ -0.93
TMC1-203ENST00000469455 EDC4Q6P2E9 1401 aaKnown RBP9.22□□□□□ -0.93
TMC1-203ENST00000469455 PIK3C2AO00443 1686 aa9.21□□□□□ -0.93
TMC1-203ENST00000469455 ATF3P18847 181 aa9.21□□□□□ -0.94
TMC1-203ENST00000469455 FOXK2Q01167 660 aa9.21□□□□□ -0.94
TMC1-203ENST00000469455 ECM1Q16610 540 aa9.21□□□□□ -0.94
TMC1-203ENST00000469455 NOM1Q5C9Z4 860 aaKnown RBP9.21□□□□□ -0.94
TMC1-203ENST00000469455 XAGE2Q96GT9 111 aa9.21□□□□□ -0.94
TMC1-203ENST00000469455 TERF2IPQ9NYB0 399 aa9.21□□□□□ -0.94
TMC1-203ENST00000469455 SCHIP1Q9P0W5 487 aaPredicted RBP9.21□□□□□ -0.94
TMC1-203ENST00000469455 USP6P35125 1406 aa9.21□□□□□ -0.94
TMC1-203ENST00000469455 SSH2Q76I76 1423 aa9.21□□□□□ -0.94
TMC1-203ENST00000469455 ALS2Q96Q42 1657 aa9.2□□□□□ -0.94
TMC1-203ENST00000469455 ROBO1Q9Y6N7 1651 aa9.2□□□□□ -0.94
TMC1-203ENST00000469455 A6NJY4 79 aa9.2□□□□□ -0.94
TMC1-203ENST00000469455 SMTNP53814 917 aa9.2□□□□□ -0.94
TMC1-203ENST00000469455 PDE3BQ13370 1112 aa9.2□□□□□ -0.94
TMC1-203ENST00000469455 NAA30Q147X3 362 aaPredicted RBP9.2□□□□□ -0.94
TMC1-203ENST00000469455 MTFR1Q15390 333 aa9.2□□□□□ -0.94
TMC1-203ENST00000469455 STAG2Q8N3U4 1231 aa9.2□□□□□ -0.94
TMC1-203ENST00000469455 HELQQ8TDG4 1101 aa9.2□□□□□ -0.94
TMC1-203ENST00000469455 VTI1AQ96AJ9 217 aa9.2□□□□□ -0.94
TMC1-203ENST00000469455 HDGFL2Q7Z4V5 671 aaPredicted RBP9.19□□□□□ -0.94
TMC1-203ENST00000469455 ARHGEF10LQ9HCE6 1279 aa9.19□□□□□ -0.94
TMC1-203ENST00000469455 ACEP12821 1306 aa9.19□□□□□ -0.94
TMC1-203ENST00000469455 NSD2O96028 1365 aa9.19□□□□□ -0.94
TMC1-203ENST00000469455 A0A1W2PRU2 124 aa9.18□□□□□ -0.94
TMC1-203ENST00000469455 ANKRD33BA6NCL7 494 aa9.18□□□□□ -0.94
TMC1-203ENST00000469455 PPP1R12BO60237 982 aaPredicted RBP9.18□□□□□ -0.94
TMC1-203ENST00000469455 ALDH1A1P00352 501 aa9.18□□□□□ -0.94
TMC1-203ENST00000469455 NPR3P17342 541 aa9.18□□□□□ -0.94
TMC1-203ENST00000469455 MTMR3Q13615 1198 aa9.18□□□□□ -0.94
TMC1-203ENST00000469455 AHDC1Q5TGY3 1603 aaPredicted RBP9.18□□□□□ -0.94
TMC1-203ENST00000469455 ZNF598Q86UK7 904 aaKnown RBP9.18□□□□□ -0.94
TMC1-203ENST00000469455 SLC9A9Q8IVB4 645 aa9.18□□□□□ -0.94
TMC1-203ENST00000469455 ORAI2Q96SN7 254 aa9.18□□□□□ -0.94
TMC1-203ENST00000469455 WASF2Q9Y6W5 498 aa9.18□□□□□ -0.94
TMC1-203ENST00000469455 MAP2P11137 1827 aaKnown RBP9.17□□□□□ -0.94
TMC1-203ENST00000469455 CRYBG1Q9Y4K1 1723 aa9.17□□□□□ -0.94
TMC1-203ENST00000469455 PXDNQ92626 1479 aa9.17□□□□□ -0.94
TMC1-203ENST00000469455 CDK2AP1O14519 115 aa9.17□□□□□ -0.94
TMC1-203ENST00000469455 FAM13AO94988 1023 aa9.17□□□□□ -0.94
TMC1-203ENST00000469455 IL2RAP01589 272 aa9.17□□□□□ -0.94
TMC1-203ENST00000469455 ADH1AP07327 375 aa9.17□□□□□ -0.94
TMC1-203ENST00000469455 ARHGAP4P98171 946 aa9.17□□□□□ -0.94
TMC1-203ENST00000469455 NNTQ13423 1086 aa9.17□□□□□ -0.94
TMC1-203ENST00000469455 ZNF697Q5TEC3 545 aa9.17□□□□□ -0.94
TMC1-203ENST00000469455 PMFBP1Q8TBY8 1022 aa9.17□□□□□ -0.94
TMC1-203ENST00000469455 ESYT1Q9BSJ8 1104 aa9.17□□□□□ -0.94
TMC1-203ENST00000469455 C2orf49Q9BVC5 232 aaPredicted RBP9.17□□□□□ -0.94
TMC1-203ENST00000469455 RAB6BQ9NRW1 208 aa9.17□□□□□ -0.94
TMC1-203ENST00000469455 DCTN4Q9UJW0 460 aa9.17□□□□□ -0.94
TMC1-203ENST00000469455 KNSTRNQ9Y448 316 aa9.17□□□□□ -0.94
TMC1-203ENST00000469455 OVOS2A0A0J9YW53 1432 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms