RNA–Protein interactions for RNA: ENST00000468948.1

ITGA4-205, Transcript of integrin subunit alpha 4, humanhuman

TSL 3

Gene ITGA4, Length 393 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-205ENST00000468948 SALL4Q9UJQ4 1053 aa11.53□□□□□ -0.56
ITGA4-205ENST00000468948 POTECB2RU33 542 aa11.52□□□□□ -0.57
ITGA4-205ENST00000468948 RGS20O76081 388 aa11.52□□□□□ -0.57
ITGA4-205ENST00000468948 GTF2F1P35269 517 aaKnown RBP eCLIP11.52□□□□□ -0.57
ITGA4-205ENST00000468948 FCGRTP55899 365 aa11.52□□□□□ -0.57
ITGA4-205ENST00000468948 COPRSQ9NQ92 184 aa11.52□□□□□ -0.57
ITGA4-205ENST00000468948 THBS1P07996 1170 aa11.51□□□□□ -0.57
ITGA4-205ENST00000468948 MAPTP10636 758 aaKnown RBP11.51□□□□□ -0.57
ITGA4-205ENST00000468948 LAMC2Q13753 1193 aa11.51□□□□□ -0.57
ITGA4-205ENST00000468948 C3orf58Q8NDZ4 430 aa11.51□□□□□ -0.57
ITGA4-205ENST00000468948 STRN4Q9NRL3 753 aa11.51□□□□□ -0.57
ITGA4-205ENST00000468948 H7C1W4 665 aa11.5□□□□□ -0.57
ITGA4-205ENST00000468948 PSAPP07602 524 aa11.5□□□□□ -0.57
ITGA4-205ENST00000468948 NFKB1P19838 968 aa11.5□□□□□ -0.57
ITGA4-205ENST00000468948 PRPF40BQ6NWY9 871 aaKnown RBP11.5□□□□□ -0.57
ITGA4-205ENST00000468948 DNAJC2Q99543 621 aaKnown RBP11.5□□□□□ -0.57
ITGA4-205ENST00000468948 NOC4LQ9BVI4 516 aaKnown RBP11.5□□□□□ -0.57
ITGA4-205ENST00000468948 LIN7BQ9HAP6 207 aa11.5□□□□□ -0.57
ITGA4-205ENST00000468948 MARK1Q9P0L2 795 aa11.5□□□□□ -0.57
ITGA4-205ENST00000468948 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.5□□□□□ -0.57
ITGA4-205ENST00000468948 SOBPA7XYQ1 873 aa11.49□□□□□ -0.57
ITGA4-205ENST00000468948 PTSQ03393 145 aa11.49□□□□□ -0.57
ITGA4-205ENST00000468948 UBAP2LQ14157 1087 aaKnown RBP11.49□□□□□ -0.57
ITGA4-205ENST00000468948 DPH6Q7L8W6 267 aa11.49□□□□□ -0.57
ITGA4-205ENST00000468948 NCAPG2Q86XI2 1143 aa11.49□□□□□ -0.57
ITGA4-205ENST00000468948 FAM177A1Q8N128 213 aaPredicted RBP11.49□□□□□ -0.57
ITGA4-205ENST00000468948 OXCT2Q9BYC2 517 aaPredicted RBP11.49□□□□□ -0.57
ITGA4-205ENST00000468948 KBTBD4Q9NVX7 518 aa11.49□□□□□ -0.57
ITGA4-205ENST00000468948 TLR7Q9NYK1 1049 aaKnown RBP11.49□□□□□ -0.57
ITGA4-205ENST00000468948 AKAP2Q9Y2D5 859 aa11.49□□□□□ -0.57
ITGA4-205ENST00000468948 TMEM238LA0A1B0GVL6 79 aa11.48□□□□□ -0.57
ITGA4-205ENST00000468948 SLC35F4A4IF30 521 aa11.48□□□□□ -0.57
ITGA4-205ENST00000468948 SPEM2Q0P670 501 aa11.48□□□□□ -0.57
ITGA4-205ENST00000468948 HYAL2Q12891 473 aa11.48□□□□□ -0.57
ITGA4-205ENST00000468948 PAK2Q13177 524 aa11.48□□□□□ -0.57
ITGA4-205ENST00000468948 GRIN2CQ14957 1233 aa11.48□□□□□ -0.57
ITGA4-205ENST00000468948 CCDC85BQ15834 202 aaPredicted RBP11.48□□□□□ -0.57
ITGA4-205ENST00000468948 DTHD1Q6ZMT9 781 aa11.48□□□□□ -0.57
ITGA4-205ENST00000468948 CRIPAKQ8N1N5 446 aa11.48□□□□□ -0.57
ITGA4-205ENST00000468948 RSRP1Q9BUV0 290 aa11.48□□□□□ -0.57
ITGA4-205ENST00000468948 BNIP3LO60238 219 aa11.47□□□□□ -0.57
ITGA4-205ENST00000468948 XRCC5P13010 732 aaKnown RBP11.47□□□□□ -0.57
ITGA4-205ENST00000468948 DBN1Q16643 649 aa11.47□□□□□ -0.57
ITGA4-205ENST00000468948 COL13A1Q5TAT6 717 aaPredicted RBP11.47□□□□□ -0.57
ITGA4-205ENST00000468948 RELL1Q8IUW5 271 aa11.47□□□□□ -0.57
ITGA4-205ENST00000468948 ARMC5Q96C12 935 aa11.47□□□□□ -0.57
ITGA4-205ENST00000468948 OSMRQ99650 979 aa11.47□□□□□ -0.57
ITGA4-205ENST00000468948 EFCC1Q9HA90 598 aa11.47□□□□□ -0.57
ITGA4-205ENST00000468948 ABCB6Q9NP58 842 aa11.47□□□□□ -0.57
ITGA4-205ENST00000468948 ATP13A2Q9NQ11 1180 aa11.47□□□□□ -0.57
ITGA4-205ENST00000468948 SOX18P35713 384 aa11.46□□□□□ -0.57
ITGA4-205ENST00000468948 GJA8P48165 433 aa11.46□□□□□ -0.57
ITGA4-205ENST00000468948 PLAURQ03405 335 aa11.46□□□□□ -0.57
ITGA4-205ENST00000468948 BHMTQ93088 406 aa11.46□□□□□ -0.57
ITGA4-205ENST00000468948 TCF12Q99081 682 aa11.46□□□□□ -0.57
ITGA4-205ENST00000468948 ZKSCAN3Q9BRR0 538 aa11.46□□□□□ -0.57
ITGA4-205ENST00000468948 PPM1HQ9ULR3 514 aa11.46□□□□□ -0.57
ITGA4-205ENST00000468948 GFRA3O60609 400 aa11.45□□□□□ -0.58
ITGA4-205ENST00000468948 KIF4AO95239 1232 aa11.45□□□□□ -0.58
ITGA4-205ENST00000468948 MAP3K6O95382 1288 aa11.45□□□□□ -0.58
ITGA4-205ENST00000468948 PWP1Q13610 501 aa11.45□□□□□ -0.58
ITGA4-205ENST00000468948 GPRASP2Q96D09 838 aa11.45□□□□□ -0.58
ITGA4-205ENST00000468948 SLC30A3Q99726 388 aa11.45□□□□□ -0.58
ITGA4-205ENST00000468948 NDFIP2Q9NV92 336 aa11.45□□□□□ -0.58
ITGA4-205ENST00000468948 SMARCA5O60264 1052 aaPredicted RBP11.44□□□□□ -0.58
ITGA4-205ENST00000468948 ACPPP15309 386 aa11.44□□□□□ -0.58
ITGA4-205ENST00000468948 RAB44Q7Z6P3 723 aaPredicted RBP11.44□□□□□ -0.58
ITGA4-205ENST00000468948 CCNJLQ8IV13 435 aa11.44□□□□□ -0.58
ITGA4-205ENST00000468948 TRIM22Q8IYM9 498 aa11.44□□□□□ -0.58
ITGA4-205ENST00000468948 ABHD17AQ96GS6 310 aa11.44□□□□□ -0.58
ITGA4-205ENST00000468948 CNTNAP3BQ96NU0 1288 aa11.44□□□□□ -0.58
ITGA4-205ENST00000468948 TRIM56Q9BRZ2 755 aaKnown RBP11.44□□□□□ -0.58
ITGA4-205ENST00000468948 SPON2Q9BUD6 331 aa11.44□□□□□ -0.58
ITGA4-205ENST00000468948 CNTNAP3Q9BZ76 1288 aa11.44□□□□□ -0.58
ITGA4-205ENST00000468948 LNPKQ9C0E8 428 aa11.44□□□□□ -0.58
ITGA4-205ENST00000468948 CUEDC1Q9NWM3 386 aaPredicted RBP11.44□□□□□ -0.58
ITGA4-205ENST00000468948 HCN2Q9UL51 889 aa11.44□□□□□ -0.58
ITGA4-205ENST00000468948 MINDY4BA8MYZ0 360 aa11.43□□□□□ -0.58
ITGA4-205ENST00000468948 F6X3S4 739 aa11.43□□□□□ -0.58
ITGA4-205ENST00000468948 NRG2O14511 850 aaPredicted RBP11.43□□□□□ -0.58
ITGA4-205ENST00000468948 FBXO24O75426 580 aa11.43□□□□□ -0.58
ITGA4-205ENST00000468948 ATF4P18848 351 aaPredicted RBP11.43□□□□□ -0.58
ITGA4-205ENST00000468948 CD33P20138 364 aa11.43□□□□□ -0.58
ITGA4-205ENST00000468948 GBP2P32456 591 aaPredicted RBP11.43□□□□□ -0.58
ITGA4-205ENST00000468948 MAP3K10Q02779 954 aa11.43□□□□□ -0.58
ITGA4-205ENST00000468948 DHX32Q7L7V1 743 aaKnown RBP11.43□□□□□ -0.58
ITGA4-205ENST00000468948 MCF2L2Q86YR7 1114 aa11.43□□□□□ -0.58
ITGA4-205ENST00000468948 CCDC155Q8N6L0 562 aa11.43□□□□□ -0.58
ITGA4-205ENST00000468948 ANKRD24Q8TF21 1146 aa11.43□□□□□ -0.58
ITGA4-205ENST00000468948 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.43□□□□□ -0.58
ITGA4-205ENST00000468948 ZFYVE1Q9HBF4 777 aa11.43□□□□□ -0.58
ITGA4-205ENST00000468948 TRPA1O75762 1119 aa11.42□□□□□ -0.58
ITGA4-205ENST00000468948 SV2BQ7L1I2 683 aa11.42□□□□□ -0.58
ITGA4-205ENST00000468948 KIAA0825Q8IV33 1275 aa11.42□□□□□ -0.58
ITGA4-205ENST00000468948 CEP120Q8N960 986 aa11.42□□□□□ -0.58
ITGA4-205ENST00000468948 TMEM74Q96NL1 305 aa11.42□□□□□ -0.58
ITGA4-205ENST00000468948 NSUN5Q96P11 429 aaKnown RBP11.42□□□□□ -0.58
ITGA4-205ENST00000468948 ST8SIA5O15466 376 aa11.41□□□□□ -0.58
ITGA4-205ENST00000468948 RLBP1P12271 317 aa11.41□□□□□ -0.58
ITGA4-205ENST00000468948 HOXD8P13378 290 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms